RNA–Protein interactions for RNA: ENST00000507823.5

SFXN1-208, Transcript of sideroflexin 1, humanhuman

TSL 2

Gene SFXN1, Length 2,611 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN1-208ENST00000507823 ZRSR2Q15696 482 aaKnown RBP17.51■□□□□ 0.39
SFXN1-208ENST00000507823 LYPLAL1Q5VWZ2 237 aa17.51■□□□□ 0.39
SFXN1-208ENST00000507823 PGAM4Q8N0Y7 254 aa17.51■□□□□ 0.39
SFXN1-208ENST00000507823 KCNV2Q8TDN2 545 aa17.51■□□□□ 0.39
SFXN1-208ENST00000507823 NRG4Q8WWG1 115 aa17.51■□□□□ 0.39
SFXN1-208ENST00000507823 FAM136AQ96C01 138 aa17.51■□□□□ 0.39
SFXN1-208ENST00000507823 C19orf60Q96EN9 201 aa17.51■□□□□ 0.39
SFXN1-208ENST00000507823 ZNF570Q96NI8 536 aa17.51■□□□□ 0.39
SFXN1-208ENST00000507823 CXXC1Q9P0U4 656 aaPredicted RBP17.51■□□□□ 0.39
SFXN1-208ENST00000507823 POMPQ9Y244 141 aa17.51■□□□□ 0.39
SFXN1-208ENST00000507823 CCL26Q9Y258 94 aa17.51■□□□□ 0.39
SFXN1-208ENST00000507823 DNAJC15Q9Y5T4 150 aa17.51■□□□□ 0.39
SFXN1-208ENST00000507823 AZIN1O14977 448 aa17.51■□□□□ 0.39
SFXN1-208ENST00000507823 UBDO15205 165 aa17.51■□□□□ 0.39
SFXN1-208ENST00000507823 GFAPP14136 432 aa17.51■□□□□ 0.39
SFXN1-208ENST00000507823 SERPINA4P29622 427 aa17.51■□□□□ 0.39
SFXN1-208ENST00000507823 SNRPD1P62314 119 aaKnown RBP17.51■□□□□ 0.39
SFXN1-208ENST00000507823 IRX1P78414 480 aaPredicted RBP17.51■□□□□ 0.39
SFXN1-208ENST00000507823 CLCQ05315 142 aa17.51■□□□□ 0.39
SFXN1-208ENST00000507823 CDC16Q13042 620 aa17.51■□□□□ 0.39
SFXN1-208ENST00000507823 FUT11Q495W5 492 aa17.51■□□□□ 0.39
SFXN1-208ENST00000507823 ANKS6Q68DC2 871 aa17.51■□□□□ 0.39
SFXN1-208ENST00000507823 ZSWIM9Q86XI8 627 aa17.51■□□□□ 0.39
SFXN1-208ENST00000507823 ZNF557Q8N988 423 aaPredicted RBP17.51■□□□□ 0.39
SFXN1-208ENST00000507823 OR6K2Q8NGY2 324 aa17.51■□□□□ 0.39
SFXN1-208ENST00000507823 IL26Q9NPH9 171 aa17.51■□□□□ 0.39
SFXN1-208ENST00000507823 HCFC1R1Q9NWW0 138 aa17.51■□□□□ 0.39
SFXN1-208ENST00000507823 ANGPTL2Q9UKU9 493 aa17.51■□□□□ 0.39
SFXN1-208ENST00000507823 NPEPPSL1A6NEC2 478 aa17.51■□□□□ 0.39
SFXN1-208ENST00000507823 LRRC14BA6NHZ5 514 aa17.51■□□□□ 0.39
SFXN1-208ENST00000507823 GOLGA8CPA6NN73 597 aa17.51■□□□□ 0.39
SFXN1-208ENST00000507823 SUPT3HB4E1H0 165 aa17.51■□□□□ 0.39
SFXN1-208ENST00000507823 SUPT3HO75486 399 aa17.51■□□□□ 0.39
SFXN1-208ENST00000507823 ACADVLP49748 655 aa17.51■□□□□ 0.39
SFXN1-208ENST00000507823 NUDT2P50583 147 aa17.51■□□□□ 0.39
SFXN1-208ENST00000507823 GTF2A1P52655 376 aaPredicted RBP17.51■□□□□ 0.39
SFXN1-208ENST00000507823 CDH13P55290 713 aa17.51■□□□□ 0.39
SFXN1-208ENST00000507823 NFATC2Q13469 925 aa17.51■□□□□ 0.39
SFXN1-208ENST00000507823 CCNIQ14094 377 aa17.51■□□□□ 0.39
SFXN1-208ENST00000507823 MYLK3Q32MK0 819 aa17.51■□□□□ 0.39
SFXN1-208ENST00000507823 TMEM240Q5SV17 173 aa17.51■□□□□ 0.39
SFXN1-208ENST00000507823 CLEC6AQ6EIG7 209 aa17.51■□□□□ 0.39
SFXN1-208ENST00000507823 C22orf39Q6P5X5 142 aa17.51■□□□□ 0.39
SFXN1-208ENST00000507823 TAS2R42Q7RTR8 314 aa17.51■□□□□ 0.39
SFXN1-208ENST00000507823 LEMD2Q8NC56 503 aa17.51■□□□□ 0.39
SFXN1-208ENST00000507823 SPPL3Q8TCT6 385 aa17.51■□□□□ 0.39
SFXN1-208ENST00000507823 EEF1AKMT1Q8WVE0 214 aa17.51■□□□□ 0.39
SFXN1-208ENST00000507823 EXT2Q93063 718 aa17.51■□□□□ 0.39
SFXN1-208ENST00000507823 RCN3Q96D15 328 aa17.51■□□□□ 0.39
SFXN1-208ENST00000507823 MCCC1Q96RQ3 725 aaPredicted RBP17.51■□□□□ 0.39
SFXN1-208ENST00000507823 SMG9Q9H0W8 520 aaKnown RBP17.51■□□□□ 0.39
SFXN1-208ENST00000507823 EFCAB1Q9HAE3 211 aa17.51■□□□□ 0.39
SFXN1-208ENST00000507823 PCDH10Q9P2E7 1040 aa17.51■□□□□ 0.39
SFXN1-208ENST00000507823 BTN3A1O00481 513 aa17.5■□□□□ 0.39
SFXN1-208ENST00000507823 PRAMEF1O95521 474 aa17.5■□□□□ 0.39
SFXN1-208ENST00000507823 ZNF7P17097 686 aaPredicted RBP17.5■□□□□ 0.39
SFXN1-208ENST00000507823 PTPN2P17706 415 aa17.5■□□□□ 0.39
SFXN1-208ENST00000507823 EEF1DP29692 281 aaKnown RBP17.5■□□□□ 0.39
SFXN1-208ENST00000507823 CTSOP43234 321 aaPredicted RBP17.5■□□□□ 0.39
SFXN1-208ENST00000507823 HK3P52790 923 aa17.5■□□□□ 0.39
SFXN1-208ENST00000507823 UBE3AQ05086 875 aa17.5■□□□□ 0.39
SFXN1-208ENST00000507823 MAPRE2Q15555 327 aa17.5■□□□□ 0.39
SFXN1-208ENST00000507823 CCDC6Q16204 474 aa17.5■□□□□ 0.39
SFXN1-208ENST00000507823 GPR33Q49SQ1 333 aa17.5■□□□□ 0.39
SFXN1-208ENST00000507823 ASTLQ6HA08 431 aaPredicted RBP17.5■□□□□ 0.39
SFXN1-208ENST00000507823 LRRC74BQ6ZQY2 392 aa17.5■□□□□ 0.39
SFXN1-208ENST00000507823 UBE2Q1Q7Z7E8 422 aa17.5■□□□□ 0.39
SFXN1-208ENST00000507823 KIAA0907Q7Z7F0 614 aaPredicted RBP17.5■□□□□ 0.39
SFXN1-208ENST00000507823 SERPINA9Q86WD7 417 aa17.5■□□□□ 0.39
SFXN1-208ENST00000507823 PHYKPLQ8IUZ5 450 aa17.5■□□□□ 0.39
SFXN1-208ENST00000507823 PLPP6Q8IY26 295 aa17.5■□□□□ 0.39
SFXN1-208ENST00000507823 TCEAL4Q96EI5 215 aa17.5■□□□□ 0.39
SFXN1-208ENST00000507823 LINGO1Q96FE5 620 aa17.5■□□□□ 0.39
SFXN1-208ENST00000507823 NSUN5Q96P11 429 aaKnown RBP17.5■□□□□ 0.39
SFXN1-208ENST00000507823 SARDHQ9UL12 918 aa17.5■□□□□ 0.39
SFXN1-208ENST00000507823 G3BP2Q9UN86 482 aaKnown RBP17.5■□□□□ 0.39
SFXN1-208ENST00000507823 C1orf232A0A0U1RR37 186 aa17.5■□□□□ 0.39
SFXN1-208ENST00000507823 AIM2O14862 343 aa17.5■□□□□ 0.39
SFXN1-208ENST00000507823 GRM6O15303 877 aa17.5■□□□□ 0.39
SFXN1-208ENST00000507823 ANPEPP15144 967 aa17.5■□□□□ 0.39
SFXN1-208ENST00000507823 BPIP17213 487 aa17.5■□□□□ 0.39
SFXN1-208ENST00000507823 GKP32189 559 aa17.5■□□□□ 0.39
SFXN1-208ENST00000507823 PSMD8P48556 350 aa17.5■□□□□ 0.39
SFXN1-208ENST00000507823 AP2B1P63010 937 aa17.5■□□□□ 0.39
SFXN1-208ENST00000507823 DMC1Q14565 340 aa17.5■□□□□ 0.39
SFXN1-208ENST00000507823 PPP1R3AQ16821 1122 aa17.5■□□□□ 0.39
SFXN1-208ENST00000507823 GRAMD4Q6IC98 578 aa17.5■□□□□ 0.39
SFXN1-208ENST00000507823 RBFAQ8N0V3 343 aa17.5■□□□□ 0.39
SFXN1-208ENST00000507823 PCDH20Q8N6Y1 951 aaKnown RBP17.5■□□□□ 0.39
SFXN1-208ENST00000507823 PHOSPHO2Q8TCD6 241 aa17.5■□□□□ 0.39
SFXN1-208ENST00000507823 SCRN2Q96FV2 425 aa17.5■□□□□ 0.39
SFXN1-208ENST00000507823 MARK4Q96L34 752 aa17.5■□□□□ 0.39
SFXN1-208ENST00000507823 TNKS2Q9H2K2 1166 aa17.5■□□□□ 0.39
SFXN1-208ENST00000507823 S100A14Q9HCY8 104 aa17.5■□□□□ 0.39
SFXN1-208ENST00000507823 MID1IP1Q9NPA3 183 aa17.5■□□□□ 0.39
SFXN1-208ENST00000507823 PCTPQ9UKL6 214 aa17.5■□□□□ 0.39
SFXN1-208ENST00000507823 PPP6CO00743 305 aa17.49■□□□□ 0.39
SFXN1-208ENST00000507823 BMP1P13497 986 aa17.49■□□□□ 0.39
SFXN1-208ENST00000507823 TSPAN8P19075 237 aa17.49■□□□□ 0.39
SFXN1-208ENST00000507823 ITGALP20701 1170 aa17.49■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms