RNA–Protein interactions for RNA: ENST00000506161.5

PDLIM7-215, Transcript of PDZ and LIM domain 7, humanhuman

TSL 3

Gene PDLIM7, Length 759 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-215ENST00000506161 CD1CP29017 333 aa16.57■□□□□ 0.24
PDLIM7-215ENST00000506161 ALDH4A1P30038 563 aa16.57■□□□□ 0.24
PDLIM7-215ENST00000506161 CTNNA1P35221 906 aaKnown RBP16.57■□□□□ 0.24
PDLIM7-215ENST00000506161 CYLC1P35663 651 aaPredicted RBP16.57■□□□□ 0.24
PDLIM7-215ENST00000506161 NR2C2P49116 596 aa16.57■□□□□ 0.24
PDLIM7-215ENST00000506161 ARSDP51689 593 aa16.57■□□□□ 0.24
PDLIM7-215ENST00000506161 WNT3AP56704 352 aa16.57■□□□□ 0.24
PDLIM7-215ENST00000506161 PTPRCAPQ14761 206 aa16.57■□□□□ 0.24
PDLIM7-215ENST00000506161 SLC14A2Q15849 920 aa16.57■□□□□ 0.24
PDLIM7-215ENST00000506161 BBS12Q6ZW61 710 aa16.57■□□□□ 0.24
PDLIM7-215ENST00000506161 RAB11FIP2Q7L804 512 aa16.57■□□□□ 0.24
PDLIM7-215ENST00000506161 CHST15Q7LFX5 561 aaPredicted RBP16.57■□□□□ 0.24
PDLIM7-215ENST00000506161 DAAM2Q86T65 1068 aa16.57■□□□□ 0.24
PDLIM7-215ENST00000506161 CCDC50Q8IVM0 306 aa16.57■□□□□ 0.24
PDLIM7-215ENST00000506161 LSMEM2Q8N112 164 aa16.57■□□□□ 0.24
PDLIM7-215ENST00000506161 LRRC57Q8N9N7 239 aa16.57■□□□□ 0.24
PDLIM7-215ENST00000506161 RCBTB1Q8NDN9 531 aa16.57■□□□□ 0.24
PDLIM7-215ENST00000506161 ZNF248Q8NDW4 579 aa16.57■□□□□ 0.24
PDLIM7-215ENST00000506161 KIAA1524Q8TCG1 905 aa16.57■□□□□ 0.24
PDLIM7-215ENST00000506161 SPATA16Q9BXB7 569 aa16.57■□□□□ 0.24
PDLIM7-215ENST00000506161 CDH19Q9H159 772 aa16.57■□□□□ 0.24
PDLIM7-215ENST00000506161 MAGEE1Q9HCI5 957 aa16.57■□□□□ 0.24
PDLIM7-215ENST00000506161 TBC1D29Q9UFV1 150 aa16.57■□□□□ 0.24
PDLIM7-215ENST00000506161 SLC23A2Q9UGH3 650 aa16.57■□□□□ 0.24
PDLIM7-215ENST00000506161 ZNHIT2Q9UHR6 403 aa16.57■□□□□ 0.24
PDLIM7-215ENST00000506161 DNPEPQ9ULA0 475 aa16.57■□□□□ 0.24
PDLIM7-215ENST00000506161 ERVH48-1M5A8F1 160 aa16.56■□□□□ 0.24
PDLIM7-215ENST00000506161 PLD2O14939 933 aa16.56■□□□□ 0.24
PDLIM7-215ENST00000506161 BUD23O43709 281 aaKnown RBP16.56■□□□□ 0.24
PDLIM7-215ENST00000506161 ACP5P13686 325 aa16.56■□□□□ 0.24
PDLIM7-215ENST00000506161 MPSTP25325 297 aa16.56■□□□□ 0.24
PDLIM7-215ENST00000506161 CLN3Q13286 438 aa16.56■□□□□ 0.24
PDLIM7-215ENST00000506161 TFDP2Q14188 446 aa16.56■□□□□ 0.24
PDLIM7-215ENST00000506161 SPA17Q15506 151 aa16.56■□□□□ 0.24
PDLIM7-215ENST00000506161 TGIF1Q15583 401 aa16.56■□□□□ 0.24
PDLIM7-215ENST00000506161 PPP2R5EQ16537 467 aa16.56■□□□□ 0.24
PDLIM7-215ENST00000506161 SIRPB2Q5JXA9 342 aa16.56■□□□□ 0.24
PDLIM7-215ENST00000506161 ADGRG6Q86SQ4 1221 aa16.56■□□□□ 0.24
PDLIM7-215ENST00000506161 GALNT13Q8IUC8 556 aa16.56■□□□□ 0.24
PDLIM7-215ENST00000506161 RCOR2Q8IZ40 523 aa16.56■□□□□ 0.24
PDLIM7-215ENST00000506161 FBXO39Q8N4B4 442 aa16.56■□□□□ 0.24
PDLIM7-215ENST00000506161 SLC25A41Q8N5S1 370 aa16.56■□□□□ 0.24
PDLIM7-215ENST00000506161 OR6C4Q8NGE1 309 aa16.56■□□□□ 0.24
PDLIM7-215ENST00000506161 KCNE4Q8WWG9 221 aa16.56■□□□□ 0.24
PDLIM7-215ENST00000506161 P3H4Q92791 437 aa16.56■□□□□ 0.24
PDLIM7-215ENST00000506161 DESI2Q9BSY9 194 aa16.56■□□□□ 0.24
PDLIM7-215ENST00000506161 ADGRE3Q9BY15 652 aa16.56■□□□□ 0.24
PDLIM7-215ENST00000506161 THSD1Q9NS62 852 aa16.56■□□□□ 0.24
PDLIM7-215ENST00000506161 FOXJ2Q9P0K8 574 aa16.56■□□□□ 0.24
PDLIM7-215ENST00000506161 SCHIP1Q9P0W5 487 aaPredicted RBP16.56■□□□□ 0.24
PDLIM7-215ENST00000506161 VPS18Q9P253 973 aa16.56■□□□□ 0.24
PDLIM7-215ENST00000506161 PISDQ9UG56 409 aa16.56■□□□□ 0.24
PDLIM7-215ENST00000506161 PACSIN2Q9UNF0 486 aaPredicted RBP16.56■□□□□ 0.24
PDLIM7-215ENST00000506161 LOXL2Q9Y4K0 774 aa16.56■□□□□ 0.24
PDLIM7-215ENST00000506161 PCDHA3Q9Y5H8 950 aa16.56■□□□□ 0.24
PDLIM7-215ENST00000506161 IGHV1OR21-1A0A087WYE8 117 aa16.55■□□□□ 0.24
PDLIM7-215ENST00000506161 PRAMEF33A0A0G2JMD5 474 aa16.55■□□□□ 0.24
PDLIM7-215ENST00000506161 IGHV5-10-1A0A0J9YXX1 117 aa16.55■□□□□ 0.24
PDLIM7-215ENST00000506161 GAPDHSO14556 408 aaPredicted RBP16.55■□□□□ 0.24
PDLIM7-215ENST00000506161 PJA2O43164 708 aa16.55■□□□□ 0.24
PDLIM7-215ENST00000506161 KLK10O43240 276 aa16.55■□□□□ 0.24
PDLIM7-215ENST00000506161 EFSO43281 561 aa16.55■□□□□ 0.24
PDLIM7-215ENST00000506161 NUAK1O60285 661 aa16.55■□□□□ 0.24
PDLIM7-215ENST00000506161 PYGMP11217 842 aa16.55■□□□□ 0.24
PDLIM7-215ENST00000506161 CCL4P13236 92 aa16.55■□□□□ 0.24
PDLIM7-215ENST00000506161 RBMS1P29558 406 aaKnown RBP16.55■□□□□ 0.24
PDLIM7-215ENST00000506161 SLC5A2P31639 672 aa16.55■□□□□ 0.24
PDLIM7-215ENST00000506161 DCDC1P59894 354 aa16.55■□□□□ 0.24
PDLIM7-215ENST00000506161 CXADRP78310 365 aa16.55■□□□□ 0.24
PDLIM7-215ENST00000506161 OTUD4Q01804 1114 aaKnown RBP16.55■□□□□ 0.24
PDLIM7-215ENST00000506161 PLA2G4EQ3MJ16 856 aa16.55■□□□□ 0.24
PDLIM7-215ENST00000506161 TAF1BQ53T94 588 aaPredicted RBP16.55■□□□□ 0.24
PDLIM7-215ENST00000506161 ODF2Q5BJF6 829 aa16.55■□□□□ 0.24
PDLIM7-215ENST00000506161 CHCHD2P9Q5T1J5 151 aaPredicted RBP16.55■□□□□ 0.24
PDLIM7-215ENST00000506161 PID1Q7Z2X4 250 aa16.55■□□□□ 0.24
PDLIM7-215ENST00000506161 ZNF547Q8IVP9 402 aa16.55■□□□□ 0.24
PDLIM7-215ENST00000506161 RAVER1Q8IY67 606 aaKnown RBP16.55■□□□□ 0.24
PDLIM7-215ENST00000506161 SFRP1Q8N474 314 aa16.55■□□□□ 0.24
PDLIM7-215ENST00000506161 ACTL9Q8TC94 416 aa16.55■□□□□ 0.24
PDLIM7-215ENST00000506161 CCHCR1Q8TD31 782 aa16.55■□□□□ 0.24
PDLIM7-215ENST00000506161 NAT14Q8WUY8 206 aa16.55■□□□□ 0.24
PDLIM7-215ENST00000506161 HTR3CQ8WXA8 447 aa16.55■□□□□ 0.24
PDLIM7-215ENST00000506161 GRAMD1AQ96CP6 724 aa16.55■□□□□ 0.24
PDLIM7-215ENST00000506161 FCRL5Q96RD9 977 aa16.55■□□□□ 0.24
PDLIM7-215ENST00000506161 GPR63Q9BZJ6 419 aa16.55■□□□□ 0.24
PDLIM7-215ENST00000506161 OR2AG1Q9H205 316 aa16.55■□□□□ 0.24
PDLIM7-215ENST00000506161 KLHL8Q9P2G9 620 aaPredicted RBP16.55■□□□□ 0.24
PDLIM7-215ENST00000506161 NFKBIL1Q9UBC1 381 aaPredicted RBP16.55■□□□□ 0.24
PDLIM7-215ENST00000506161 MGAQ8IWI9 3026 aa16.54■□□□□ 0.24
PDLIM7-215ENST00000506161 PRR19A6NJB7 356 aa16.54■□□□□ 0.24
PDLIM7-215ENST00000506161 RHPN2P1A8MT19 583 aa16.54■□□□□ 0.24
PDLIM7-215ENST00000506161 AGTP01019 485 aa16.54■□□□□ 0.24
PDLIM7-215ENST00000506161 PYGLP06737 847 aa16.54■□□□□ 0.24
PDLIM7-215ENST00000506161 ITGA2BP08514 1039 aa16.54■□□□□ 0.24
PDLIM7-215ENST00000506161 CTNNA2P26232 953 aa16.54■□□□□ 0.24
PDLIM7-215ENST00000506161 VAV2P52735 878 aa16.54■□□□□ 0.24
PDLIM7-215ENST00000506161 MAP9Q49MG5 647 aa16.54■□□□□ 0.24
PDLIM7-215ENST00000506161 PHF19Q5T6S3 580 aa16.54■□□□□ 0.24
PDLIM7-215ENST00000506161 CRTC3Q6UUV7 619 aa16.54■□□□□ 0.24
PDLIM7-215ENST00000506161 TMTC1Q8IUR5 882 aa16.54■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms