RNA–Protein interactions for RNA: ENST00000494728.5

VTI1A-208, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 2

Gene VTI1A, Length 463 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-208ENST00000494728 TSPY26PQ9H489 355 aa11.53□□□□□ -0.56
VTI1A-208ENST00000494728 FAM83DQ9H4H8 585 aa11.53□□□□□ -0.56
VTI1A-208ENST00000494728 OCIAD1Q9NX40 245 aa11.53□□□□□ -0.56
VTI1A-208ENST00000494728 KCNK4Q9NYG8 393 aa11.53□□□□□ -0.56
VTI1A-208ENST00000494728 UBP1Q9NZI7 540 aa11.53□□□□□ -0.56
VTI1A-208ENST00000494728 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.53□□□□□ -0.56
VTI1A-208ENST00000494728 VPS18Q9P253 973 aa11.53□□□□□ -0.56
VTI1A-208ENST00000494728 ATXN10Q9UBB4 475 aa11.53□□□□□ -0.56
VTI1A-208ENST00000494728 ZNHIT2Q9UHR6 403 aa11.53□□□□□ -0.56
VTI1A-208ENST00000494728 TMPRSS11EQ9UL52 423 aa11.53□□□□□ -0.56
VTI1A-208ENST00000494728 DNPEPQ9ULA0 475 aa11.53□□□□□ -0.56
VTI1A-208ENST00000494728 ZNF711Q9Y462 761 aa11.53□□□□□ -0.56
VTI1A-208ENST00000494728 PCDHGA4Q9Y5G9 962 aa11.53□□□□□ -0.56
VTI1A-208ENST00000494728 PRR19A6NJB7 356 aa11.52□□□□□ -0.57
VTI1A-208ENST00000494728 PYCARD-AS1I3L0S3 204 aa11.52□□□□□ -0.57
VTI1A-208ENST00000494728 GPR39O43194 453 aa11.52□□□□□ -0.57
VTI1A-208ENST00000494728 PYGLP06737 847 aa11.52□□□□□ -0.57
VTI1A-208ENST00000494728 COMTP21964 271 aa11.52□□□□□ -0.57
VTI1A-208ENST00000494728 PTPN3P26045 913 aa11.52□□□□□ -0.57
VTI1A-208ENST00000494728 CA5AP35218 305 aa11.52□□□□□ -0.57
VTI1A-208ENST00000494728 CYP4F2P78329 520 aa11.52□□□□□ -0.57
VTI1A-208ENST00000494728 WASHC5Q12768 1159 aa11.52□□□□□ -0.57
VTI1A-208ENST00000494728 NFATC2Q13469 925 aa11.52□□□□□ -0.57
VTI1A-208ENST00000494728 LRP8Q14114 963 aa11.52□□□□□ -0.57
VTI1A-208ENST00000494728 PLA2G4EQ3MJ16 856 aa11.52□□□□□ -0.57
VTI1A-208ENST00000494728 LINC00303Q3SY05 128 aa11.52□□□□□ -0.57
VTI1A-208ENST00000494728 CRTC3Q6UUV7 619 aa11.52□□□□□ -0.57
VTI1A-208ENST00000494728 VSIG1Q86XK7 387 aa11.52□□□□□ -0.57
VTI1A-208ENST00000494728 BMPERQ8N8U9 685 aa11.52□□□□□ -0.57
VTI1A-208ENST00000494728 EXD3Q8N9H8 876 aa11.52□□□□□ -0.57
VTI1A-208ENST00000494728 TC2NQ8N9U0 490 aa11.52□□□□□ -0.57
VTI1A-208ENST00000494728 OR4D9Q8NGE8 314 aa11.52□□□□□ -0.57
VTI1A-208ENST00000494728 TRAF3IP1Q8TDR0 691 aaPredicted RBP11.52□□□□□ -0.57
VTI1A-208ENST00000494728 HAUS1Q96CS2 278 aa11.52□□□□□ -0.57
VTI1A-208ENST00000494728 HERPUD2Q9BSE4 406 aa11.52□□□□□ -0.57
VTI1A-208ENST00000494728 SLC25A51Q9H1U9 297 aa11.52□□□□□ -0.57
VTI1A-208ENST00000494728 OR2AG1Q9H205 316 aa11.52□□□□□ -0.57
VTI1A-208ENST00000494728 ZFYVE1Q9HBF4 777 aa11.52□□□□□ -0.57
VTI1A-208ENST00000494728 PKD2L2Q9NZM6 624 aa11.52□□□□□ -0.57
VTI1A-208ENST00000494728 SCHIP1Q9P0W5 487 aaPredicted RBP11.52□□□□□ -0.57
VTI1A-208ENST00000494728 SLC23A2Q9UGH3 650 aa11.52□□□□□ -0.57
VTI1A-208ENST00000494728 LCMT1Q9UIC8 334 aa11.52□□□□□ -0.57
VTI1A-208ENST00000494728 B3GALT1Q9Y5Z6 326 aa11.52□□□□□ -0.57
VTI1A-208ENST00000494728 PIKFYVEQ9Y2I7 2098 aa11.51□□□□□ -0.57
VTI1A-208ENST00000494728 UTP20O75691 2785 aaKnown RBP11.51□□□□□ -0.57
VTI1A-208ENST00000494728 IQCJ-SCHIP1C9J366 451 aaPredicted RBP11.51□□□□□ -0.57
VTI1A-208ENST00000494728 HGSO14964 777 aaPredicted RBP11.51□□□□□ -0.57
VTI1A-208ENST00000494728 NUAK1O60285 661 aa11.51□□□□□ -0.57
VTI1A-208ENST00000494728 SNX2O60749 519 aa11.51□□□□□ -0.57
VTI1A-208ENST00000494728 MTX2O75431 263 aa11.51□□□□□ -0.57
VTI1A-208ENST00000494728 PMPCBO75439 489 aa11.51□□□□□ -0.57
VTI1A-208ENST00000494728 BPIP17213 487 aa11.51□□□□□ -0.57
VTI1A-208ENST00000494728 NFKB1P19838 968 aa11.51□□□□□ -0.57
VTI1A-208ENST00000494728 ARHGAP25P42331 645 aa11.51□□□□□ -0.57
VTI1A-208ENST00000494728 CHRNA4P43681 627 aa11.51□□□□□ -0.57
VTI1A-208ENST00000494728 DCDC1P59894 354 aa11.51□□□□□ -0.57
VTI1A-208ENST00000494728 HHEXQ03014 270 aa11.51□□□□□ -0.57
VTI1A-208ENST00000494728 CDK18Q07002 472 aa11.51□□□□□ -0.57
VTI1A-208ENST00000494728 BIRC2Q13490 618 aa11.51□□□□□ -0.57
VTI1A-208ENST00000494728 SQSTM1Q13501 440 aa11.51□□□□□ -0.57
VTI1A-208ENST00000494728 PDK1Q15118 436 aa11.51□□□□□ -0.57
VTI1A-208ENST00000494728 TCEAL1Q15170 157 aa11.51□□□□□ -0.57
VTI1A-208ENST00000494728 ZNF569Q5MCW4 686 aa11.51□□□□□ -0.57
VTI1A-208ENST00000494728 LRRC38Q5VT99 294 aa11.51□□□□□ -0.57
VTI1A-208ENST00000494728 KDELC1Q6UW63 502 aa11.51□□□□□ -0.57
VTI1A-208ENST00000494728 SPOCD1Q6ZMY3 1216 aa11.51□□□□□ -0.57
VTI1A-208ENST00000494728 TMC3Q7Z5M5 1100 aa11.51□□□□□ -0.57
VTI1A-208ENST00000494728 ADGRG6Q86SQ4 1221 aa11.51□□□□□ -0.57
VTI1A-208ENST00000494728 NT5DC3Q86UY8 548 aa11.51□□□□□ -0.57
VTI1A-208ENST00000494728 ZNF547Q8IVP9 402 aa11.51□□□□□ -0.57
VTI1A-208ENST00000494728 RHOT2Q8IXI1 618 aa11.51□□□□□ -0.57
VTI1A-208ENST00000494728 RHOT1Q8IXI2 618 aa11.51□□□□□ -0.57
VTI1A-208ENST00000494728 RAVER1Q8IY67 606 aaKnown RBP11.51□□□□□ -0.57
VTI1A-208ENST00000494728 EXTL1Q92935 676 aa11.51□□□□□ -0.57
VTI1A-208ENST00000494728 ART4Q93070 314 aa11.51□□□□□ -0.57
VTI1A-208ENST00000494728 TMEM159Q96B96 161 aa11.51□□□□□ -0.57
VTI1A-208ENST00000494728 RNF31Q96EP0 1072 aa11.51□□□□□ -0.57
VTI1A-208ENST00000494728 WBP1Q96G27 269 aa11.51□□□□□ -0.57
VTI1A-208ENST00000494728 OXNAD1Q96HP4 312 aaPredicted RBP11.51□□□□□ -0.57
VTI1A-208ENST00000494728 CCDC42Q96M95 316 aa11.51□□□□□ -0.57
VTI1A-208ENST00000494728 GORASP1Q9BQQ3 440 aa11.51□□□□□ -0.57
VTI1A-208ENST00000494728 SPATA16Q9BXB7 569 aa11.51□□□□□ -0.57
VTI1A-208ENST00000494728 TBC1D10AQ9BXI6 508 aa11.51□□□□□ -0.57
VTI1A-208ENST00000494728 GLOD4Q9HC38 313 aa11.51□□□□□ -0.57
VTI1A-208ENST00000494728 PRDM8Q9NQV8 689 aa11.51□□□□□ -0.57
VTI1A-208ENST00000494728 ZNHIT6Q9NWK9 470 aaKnown RBP11.51□□□□□ -0.57
VTI1A-208ENST00000494728 NFKBIL1Q9UBC1 381 aaPredicted RBP11.51□□□□□ -0.57
VTI1A-208ENST00000494728 A0A0A6YYK5 440 aaPredicted RBP11.5□□□□□ -0.57
VTI1A-208ENST00000494728 PPP1R12AO14974 1030 aaPredicted RBP11.5□□□□□ -0.57
VTI1A-208ENST00000494728 GRID2O43424 1007 aa11.5□□□□□ -0.57
VTI1A-208ENST00000494728 SPOPO43791 374 aa11.5□□□□□ -0.57
VTI1A-208ENST00000494728 F3P13726 295 aa11.5□□□□□ -0.57
VTI1A-208ENST00000494728 UBE2IP63279 158 aaKnown RBP11.5□□□□□ -0.57
VTI1A-208ENST00000494728 CLPPQ16740 277 aaPredicted RBP11.5□□□□□ -0.57
VTI1A-208ENST00000494728 SNAP47Q5SQN1 464 aa11.5□□□□□ -0.57
VTI1A-208ENST00000494728 TMEM71Q6P5X7 295 aa11.5□□□□□ -0.57
VTI1A-208ENST00000494728 IYDQ6PHW0 289 aa11.5□□□□□ -0.57
VTI1A-208ENST00000494728 TTC30BQ8N4P2 665 aa11.5□□□□□ -0.57
VTI1A-208ENST00000494728 CCHCR1Q8TD31 782 aa11.5□□□□□ -0.57
VTI1A-208ENST00000494728 KRT35Q92764 455 aa11.5□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms