RNA–Protein interactions for RNA: ENST00000493674.5

VPS52-220, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 2

Gene VPS52, Length 878 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-220ENST00000493674 WRAP53Q9BUR4 548 aaKnown RBP12.56□□□□□ -0.4
VPS52-220ENST00000493674 RIOK2Q9BVS4 552 aaKnown RBP12.56□□□□□ -0.4
VPS52-220ENST00000493674 CAB39LQ9H9S4 337 aa12.56□□□□□ -0.4
VPS52-220ENST00000493674 LMAN1LQ9HAT1 526 aa12.56□□□□□ -0.4
VPS52-220ENST00000493674 POPDC3Q9HBV1 291 aa12.56□□□□□ -0.4
VPS52-220ENST00000493674 FBXL12Q9NXK8 326 aa12.56□□□□□ -0.4
VPS52-220ENST00000493674 KCTD5Q9NXV2 234 aa12.56□□□□□ -0.4
VPS52-220ENST00000493674 ZDHHC3Q9NYG2 299 aa12.56□□□□□ -0.4
VPS52-220ENST00000493674 CD84Q9UIB8 345 aa12.56□□□□□ -0.4
VPS52-220ENST00000493674 SLC39A10Q9ULF5 831 aa12.56□□□□□ -0.4
VPS52-220ENST00000493674 COMMD10Q9Y6G5 202 aa12.56□□□□□ -0.4
VPS52-220ENST00000493674 TCRBV21S2A2A0A5A6 115 aa12.55□□□□□ -0.4
VPS52-220ENST00000493674 PRR33A8MZF0 331 aa12.55□□□□□ -0.4
VPS52-220ENST00000493674 GOLGA8RI6L899 631 aa12.55□□□□□ -0.4
VPS52-220ENST00000493674 PFDN6O15212 129 aa12.55□□□□□ -0.4
VPS52-220ENST00000493674 TM9SF1O15321 606 aa12.55□□□□□ -0.4
VPS52-220ENST00000493674 OR1I1O60431 355 aa12.55□□□□□ -0.4
VPS52-220ENST00000493674 MMP20O60882 483 aa12.55□□□□□ -0.4
VPS52-220ENST00000493674 NDUFS3O75489 264 aa12.55□□□□□ -0.4
VPS52-220ENST00000493674 RNASEH2AO75792 299 aaKnown RBP12.55□□□□□ -0.4
VPS52-220ENST00000493674 RECQL5O94762 991 aaPredicted RBP12.55□□□□□ -0.4
VPS52-220ENST00000493674 ESR1P03372 595 aa12.55□□□□□ -0.4
VPS52-220ENST00000493674 C2P06681 752 aa12.55□□□□□ -0.4
VPS52-220ENST00000493674 DHRS4L1P0CG22 281 aa12.55□□□□□ -0.4
VPS52-220ENST00000493674 UGT1A6P19224 532 aa12.55□□□□□ -0.4
VPS52-220ENST00000493674 UGT1A1P22309 533 aa12.55□□□□□ -0.4
VPS52-220ENST00000493674 UGT1A4P22310 534 aa12.55□□□□□ -0.4
VPS52-220ENST00000493674 PMLP29590 882 aa12.55□□□□□ -0.4
VPS52-220ENST00000493674 TYK2P29597 1187 aa12.55□□□□□ -0.4
VPS52-220ENST00000493674 UGT1A3P35503 534 aa12.55□□□□□ -0.4
VPS52-220ENST00000493674 UGT1A5P35504 534 aa12.55□□□□□ -0.4
VPS52-220ENST00000493674 PPARGP37231 505 aaPredicted RBP12.55□□□□□ -0.4
VPS52-220ENST00000493674 ETV4P43268 484 aa12.55□□□□□ -0.4
VPS52-220ENST00000493674 DGKEP52429 567 aa12.55□□□□□ -0.4
VPS52-220ENST00000493674 CDKN2DP55273 166 aa12.55□□□□□ -0.4
VPS52-220ENST00000493674 B4GALNT1Q00973 533 aa12.55□□□□□ -0.4
VPS52-220ENST00000493674 USP10Q14694 798 aaKnown RBP12.55□□□□□ -0.4
VPS52-220ENST00000493674 ACOX1Q15067 660 aa12.55□□□□□ -0.4
VPS52-220ENST00000493674 INSCQ1MX18 579 aa12.55□□□□□ -0.4
VPS52-220ENST00000493674 SETMARQ53H47 684 aaPredicted RBP12.55□□□□□ -0.4
VPS52-220ENST00000493674 TMEM31Q5JXX7 168 aa12.55□□□□□ -0.4
VPS52-220ENST00000493674 KIAA1161Q6NSJ0 714 aa12.55□□□□□ -0.4
VPS52-220ENST00000493674 CDHR3Q6ZTQ4 885 aa12.55□□□□□ -0.4
VPS52-220ENST00000493674 BMP8AQ7Z5Y6 402 aa12.55□□□□□ -0.4
VPS52-220ENST00000493674 CCDC91Q7Z6B0 441 aa12.55□□□□□ -0.4
VPS52-220ENST00000493674 LCA5Q86VQ0 697 aa12.55□□□□□ -0.4
VPS52-220ENST00000493674 RBFAQ8N0V3 343 aa12.55□□□□□ -0.4
VPS52-220ENST00000493674 SIX5Q8N196 739 aa12.55□□□□□ -0.4
VPS52-220ENST00000493674 DDHD1Q8NEL9 900 aa12.55□□□□□ -0.4
VPS52-220ENST00000493674 CXorf40AQ8TE69 158 aa12.55□□□□□ -0.4
VPS52-220ENST00000493674 NUS1Q96E22 293 aa12.55□□□□□ -0.4
VPS52-220ENST00000493674 TSPAN17Q96FV3 270 aa12.55□□□□□ -0.4
VPS52-220ENST00000493674 ELMO2Q96JJ3 720 aa12.55□□□□□ -0.4
VPS52-220ENST00000493674 NDNQ99608 321 aa12.55□□□□□ -0.4
VPS52-220ENST00000493674 FOXQ1Q9C009 403 aa12.55□□□□□ -0.4
VPS52-220ENST00000493674 CHRDQ9H2X0 955 aa12.55□□□□□ -0.4
VPS52-220ENST00000493674 KDM4CQ9H3R0 1056 aa12.55□□□□□ -0.4
VPS52-220ENST00000493674 EPHX3Q9H6B9 360 aa12.55□□□□□ -0.4
VPS52-220ENST00000493674 TBC1D17Q9HA65 648 aa12.55□□□□□ -0.4
VPS52-220ENST00000493674 PREBQ9HCU5 417 aa12.55□□□□□ -0.4
VPS52-220ENST00000493674 PCMTD2Q9NV79 361 aa12.55□□□□□ -0.4
VPS52-220ENST00000493674 USP36Q9P275 1121 aaKnown RBP12.55□□□□□ -0.4
VPS52-220ENST00000493674 CRLS1Q9UJA2 301 aa12.55□□□□□ -0.4
VPS52-220ENST00000493674 FBXL21Q9UKT6 434 aa12.55□□□□□ -0.4
VPS52-220ENST00000493674 ANKRD6Q9Y2G4 727 aa12.55□□□□□ -0.4
VPS52-220ENST00000493674 FNDC3AQ9Y2H6 1198 aaKnown RBP12.55□□□□□ -0.4
VPS52-220ENST00000493674 CRYL1Q9Y2S2 319 aa12.55□□□□□ -0.4
VPS52-220ENST00000493674 COQ6Q9Y2Z9 468 aa12.55□□□□□ -0.4
VPS52-220ENST00000493674 VWA7Q9Y334 891 aa12.55□□□□□ -0.4
VPS52-220ENST00000493674 PCDHB1Q9Y5F3 818 aa12.55□□□□□ -0.4
VPS52-220ENST00000493674 THADAQ6YHU6 1953 aa12.55□□□□□ -0.4
VPS52-220ENST00000493674 A0A096LPK6 155 aa12.54□□□□□ -0.4
VPS52-220ENST00000493674 TMEM221A6NGB7 291 aa12.54□□□□□ -0.4
VPS52-220ENST00000493674 M0R296 226 aa12.54□□□□□ -0.4
VPS52-220ENST00000493674 PRMT5O14744 637 aaPredicted RBP12.54□□□□□ -0.4
VPS52-220ENST00000493674 POLR3GO15318 223 aaPredicted RBP12.54□□□□□ -0.4
VPS52-220ENST00000493674 ATG13O75143 517 aa12.54□□□□□ -0.4
VPS52-220ENST00000493674 GLRA3O75311 464 aa12.54□□□□□ -0.4
VPS52-220ENST00000493674 SPAG7O75391 227 aa12.54□□□□□ -0.4
VPS52-220ENST00000493674 ZWINTO95229 277 aa12.54□□□□□ -0.4
VPS52-220ENST00000493674 GSTA1P08263 222 aa12.54□□□□□ -0.4
VPS52-220ENST00000493674 COL6A2P12110 1019 aa12.54□□□□□ -0.4
VPS52-220ENST00000493674 PKMP14618 531 aaKnown RBP12.54□□□□□ -0.4
VPS52-220ENST00000493674 CHN1P15882 459 aa12.54□□□□□ -0.4
VPS52-220ENST00000493674 STMN1P16949 149 aa12.54□□□□□ -0.4
VPS52-220ENST00000493674 TEAD1P28347 426 aa12.54□□□□□ -0.4
VPS52-220ENST00000493674 CRABP2P29373 138 aa12.54□□□□□ -0.4
VPS52-220ENST00000493674 RPA3P35244 121 aaPredicted RBP12.54□□□□□ -0.4
VPS52-220ENST00000493674 RPS9P46781 194 aaKnown RBP12.54□□□□□ -0.4
VPS52-220ENST00000493674 GYS2P54840 703 aa12.54□□□□□ -0.4
VPS52-220ENST00000493674 WDR4P57081 412 aaKnown RBP12.54□□□□□ -0.4
VPS52-220ENST00000493674 SFSWAPQ12872 951 aaKnown RBP12.54□□□□□ -0.4
VPS52-220ENST00000493674 ZNF284Q2VY69 593 aa12.54□□□□□ -0.4
VPS52-220ENST00000493674 MAP7D1Q3KQU3 841 aa12.54□□□□□ -0.4
VPS52-220ENST00000493674 PPM1JQ5JR12 505 aa12.54□□□□□ -0.4
VPS52-220ENST00000493674 GPRC6AQ5T6X5 926 aa12.54□□□□□ -0.4
VPS52-220ENST00000493674 NEK5Q6P3R8 708 aa12.54□□□□□ -0.4
VPS52-220ENST00000493674 MACC1Q6ZN28 852 aa12.54□□□□□ -0.4
VPS52-220ENST00000493674 TAS2R42Q7RTR8 314 aa12.54□□□□□ -0.4
VPS52-220ENST00000493674 CENPLQ8N0S6 344 aaPredicted RBP12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms