RNA–Protein interactions for RNA: ENST00000493341.1

VPS13A-212, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

TSL 2

Gene VPS13A, Length 2,001 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-212ENST00000493341 FAM91A1Q658Y4 838 aa4.65□□□□□ -1.66
VPS13A-212ENST00000493341 NCAPH2Q6IBW4 605 aa4.65□□□□□ -1.66
VPS13A-212ENST00000493341 POU5F2Q8N7G0 328 aa4.65□□□□□ -1.66
VPS13A-212ENST00000493341 CEP76Q8TAP6 659 aa4.65□□□□□ -1.66
VPS13A-212ENST00000493341 OSR1Q8TAX0 266 aaPredicted RBP4.65□□□□□ -1.66
VPS13A-212ENST00000493341 ROBO4Q8WZ75 1007 aa4.65□□□□□ -1.66
VPS13A-212ENST00000493341 SPSB1Q96BD6 273 aa4.65□□□□□ -1.66
VPS13A-212ENST00000493341 PDLIM2Q96JY6 352 aa4.65□□□□□ -1.66
VPS13A-212ENST00000493341 RMDN2Q96LZ7 410 aa4.65□□□□□ -1.66
VPS13A-212ENST00000493341 NLRP4Q96MN2 994 aa4.65□□□□□ -1.66
VPS13A-212ENST00000493341 PRAM1Q96QH2 718 aa4.65□□□□□ -1.66
VPS13A-212ENST00000493341 TMEM206Q9H813 350 aa4.65□□□□□ -1.66
VPS13A-212ENST00000493341 MRPL44Q9H9J2 332 aaKnown RBP4.65□□□□□ -1.66
VPS13A-212ENST00000493341 CPNE5Q9HCH3 593 aa4.65□□□□□ -1.66
VPS13A-212ENST00000493341 MKKSQ9NPJ1 570 aaPredicted RBP4.65□□□□□ -1.66
VPS13A-212ENST00000493341 SYBUQ9NX95 663 aa4.65□□□□□ -1.66
VPS13A-212ENST00000493341 CNIH4Q9P003 139 aa4.65□□□□□ -1.66
VPS13A-212ENST00000493341 FOXJ2Q9P0K8 574 aa4.65□□□□□ -1.66
VPS13A-212ENST00000493341 STON1Q9Y6Q2 735 aa4.65□□□□□ -1.66
VPS13A-212ENST00000493341 PGRMC2O15173 223 aa4.65□□□□□ -1.67
VPS13A-212ENST00000493341 PLPP2O43688 288 aa4.65□□□□□ -1.67
VPS13A-212ENST00000493341 PRAMEF11O60813 436 aa4.65□□□□□ -1.67
VPS13A-212ENST00000493341 RTN2O75298 545 aa4.65□□□□□ -1.67
VPS13A-212ENST00000493341 FAM200BP0CF97 657 aa4.65□□□□□ -1.67
VPS13A-212ENST00000493341 UBA1P22314 1058 aaKnown RBP4.65□□□□□ -1.67
VPS13A-212ENST00000493341 GABRA5P31644 462 aa4.65□□□□□ -1.67
VPS13A-212ENST00000493341 TNFSF8P32971 234 aa4.65□□□□□ -1.67
VPS13A-212ENST00000493341 ZNF75DP51815 510 aa4.65□□□□□ -1.67
VPS13A-212ENST00000493341 SLC12A3P55017 1021 aa4.65□□□□□ -1.67
VPS13A-212ENST00000493341 CTSWP56202 376 aa4.65□□□□□ -1.67
VPS13A-212ENST00000493341 NME5P56597 212 aa4.65□□□□□ -1.67
VPS13A-212ENST00000493341 DGCR2P98153 550 aa4.65□□□□□ -1.67
VPS13A-212ENST00000493341 FAM27E3Q08E93 113 aa4.65□□□□□ -1.67
VPS13A-212ENST00000493341 NPRL3Q12980 569 aa4.65□□□□□ -1.67
VPS13A-212ENST00000493341 PTPN14Q15678 1187 aa4.65□□□□□ -1.67
VPS13A-212ENST00000493341 TTC39AQ5SRH9 613 aa4.65□□□□□ -1.67
VPS13A-212ENST00000493341 ANKRD54Q6NXT1 300 aa4.65□□□□□ -1.67
VPS13A-212ENST00000493341 Q6YL49 198 aa4.65□□□□□ -1.67
VPS13A-212ENST00000493341 DET1Q7L5Y6 550 aa4.65□□□□□ -1.67
VPS13A-212ENST00000493341 GRASPQ7Z6J2 395 aaPredicted RBP4.65□□□□□ -1.67
VPS13A-212ENST00000493341 NLRP14Q86W24 1093 aa4.65□□□□□ -1.67
VPS13A-212ENST00000493341 DDIASQ8IXT1 998 aa4.65□□□□□ -1.67
VPS13A-212ENST00000493341 SPATA6LQ8N4H0 392 aa4.65□□□□□ -1.67
VPS13A-212ENST00000493341 OR1J2Q8NGS2 313 aa4.65□□□□□ -1.67
VPS13A-212ENST00000493341 WDR20Q8TBZ3 569 aa4.65□□□□□ -1.67
VPS13A-212ENST00000493341 CAGE1Q8TC20 777 aa4.65□□□□□ -1.67
VPS13A-212ENST00000493341 ZFAND2BQ8WV99 257 aa4.65□□□□□ -1.67
VPS13A-212ENST00000493341 CAMK1GQ96NX5 476 aa4.65□□□□□ -1.67
VPS13A-212ENST00000493341 OLFM1Q99784 485 aa4.65□□□□□ -1.67
VPS13A-212ENST00000493341 BDH2Q9BUT1 245 aa4.65□□□□□ -1.67
VPS13A-212ENST00000493341 CACNG6Q9BXT2 260 aa4.65□□□□□ -1.67
VPS13A-212ENST00000493341 PPP1R3EQ9H7J1 279 aa4.65□□□□□ -1.67
VPS13A-212ENST00000493341 ADAM21Q9UKJ8 722 aa4.65□□□□□ -1.67
VPS13A-212ENST00000493341 TESMINQ9Y4I5 508 aa4.65□□□□□ -1.67
VPS13A-212ENST00000493341 PCDHGA1Q9Y5H4 931 aa4.65□□□□□ -1.67
VPS13A-212ENST00000493341 NFS1Q9Y697 457 aa4.65□□□□□ -1.67
VPS13A-212ENST00000493341 KANSL1LA0AUZ9 987 aa4.64□□□□□ -1.67
VPS13A-212ENST00000493341 OOEPA6NGQ2 149 aa4.64□□□□□ -1.67
VPS13A-212ENST00000493341 M0QZ24 198 aa4.64□□□□□ -1.67
VPS13A-212ENST00000493341 MAP2K7O14733 419 aa4.64□□□□□ -1.67
VPS13A-212ENST00000493341 CAPN9O14815 690 aa4.64□□□□□ -1.67
VPS13A-212ENST00000493341 SEC22BO75396 215 aa4.64□□□□□ -1.67
VPS13A-212ENST00000493341 CREG1O75629 220 aa4.64□□□□□ -1.67
VPS13A-212ENST00000493341 CLDN7O95471 211 aa4.64□□□□□ -1.67
VPS13A-212ENST00000493341 G6PDP11413 515 aa4.64□□□□□ -1.67
VPS13A-212ENST00000493341 ADRA2CP18825 462 aa4.64□□□□□ -1.67
VPS13A-212ENST00000493341 GPTP24298 496 aa4.64□□□□□ -1.67
VPS13A-212ENST00000493341 HOXC9P31274 260 aa4.64□□□□□ -1.67
VPS13A-212ENST00000493341 DCTDP32321 178 aa4.64□□□□□ -1.67
VPS13A-212ENST00000493341 TUBA3CQ13748 450 aa4.64□□□□□ -1.67
VPS13A-212ENST00000493341 ZNF169Q14929 603 aaPredicted RBP4.64□□□□□ -1.67
VPS13A-212ENST00000493341 SHEQ5VZ18 495 aa4.64□□□□□ -1.67
VPS13A-212ENST00000493341 DPY19L2P1Q6NXN4 242 aa4.64□□□□□ -1.67
VPS13A-212ENST00000493341 METTL2BQ6P1Q9 378 aaKnown RBP4.64□□□□□ -1.67
VPS13A-212ENST00000493341 WDR73Q6P4I2 378 aa4.64□□□□□ -1.67
VPS13A-212ENST00000493341 TUBA3EQ6PEY2 450 aa4.64□□□□□ -1.67
VPS13A-212ENST00000493341 MTSS1LQ765P7 747 aa4.64□□□□□ -1.67
VPS13A-212ENST00000493341 CACNA2D4Q7Z3S7 1137 aa4.64□□□□□ -1.67
VPS13A-212ENST00000493341 VRK3Q8IV63 474 aa4.64□□□□□ -1.67
VPS13A-212ENST00000493341 FAM219AQ8IW50 185 aa4.64□□□□□ -1.67
VPS13A-212ENST00000493341 MB21D2Q8IYB1 491 aaPredicted RBP4.64□□□□□ -1.67
VPS13A-212ENST00000493341 ST7LQ8TDW4 575 aa4.64□□□□□ -1.67
VPS13A-212ENST00000493341 LINC00476Q8WZB0 136 aa4.64□□□□□ -1.67
VPS13A-212ENST00000493341 TAF4BQ92750 862 aa4.64□□□□□ -1.67
VPS13A-212ENST00000493341 METTL2AQ96IZ6 378 aaKnown RBP4.64□□□□□ -1.67
VPS13A-212ENST00000493341 CLMNQ96JQ2 1002 aa4.64□□□□□ -1.67
VPS13A-212ENST00000493341 C8orf49Q96NF6 230 aa4.64□□□□□ -1.67
VPS13A-212ENST00000493341 PKP4Q99569 1192 aa4.64□□□□□ -1.67
VPS13A-212ENST00000493341 FZD8Q9H461 694 aa4.64□□□□□ -1.67
VPS13A-212ENST00000493341 EQTNQ9NQ60 294 aa4.64□□□□□ -1.67
VPS13A-212ENST00000493341 FETUBQ9UGM5 382 aa4.64□□□□□ -1.67
VPS13A-212ENST00000493341 ITGA11Q9UKX5 1188 aa4.64□□□□□ -1.67
VPS13A-212ENST00000493341 SLC4A4Q9Y6R1 1079 aa4.64□□□□□ -1.67
VPS13A-212ENST00000493341 CCDC180Q9P1Z9 1646 aa4.64□□□□□ -1.67
VPS13A-212ENST00000493341 CPLX1O14810 134 aa4.63□□□□□ -1.67
VPS13A-212ENST00000493341 BCAS2O75934 225 aaPredicted RBP4.63□□□□□ -1.67
VPS13A-212ENST00000493341 PEX11BO96011 259 aa4.63□□□□□ -1.67
VPS13A-212ENST00000493341 MMP3P08254 477 aa4.63□□□□□ -1.67
VPS13A-212ENST00000493341 NHLRC4P0CG21 123 aaPredicted RBP4.63□□□□□ -1.67
VPS13A-212ENST00000493341 ENO3P13929 434 aaPredicted RBP4.63□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms