RNA–Protein interactions for RNA: ENST00000487615.5

TRA2B-214, Transcript of transformer 2 beta homolog, humanhuman

TSL 1 (best)

Gene TRA2B, Length 4,485 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2B-214ENST00000487615 COL4A5P29400 1685 aa11.74□□□□□ -0.53
TRA2B-214ENST00000487615 MGEA5O60502 916 aa11.74□□□□□ -0.53
TRA2B-214ENST00000487615 AOC2O75106 756 aa11.74□□□□□ -0.53
TRA2B-214ENST00000487615 FTH1P02794 183 aa11.74□□□□□ -0.53
TRA2B-214ENST00000487615 SULT2A1Q06520 285 aa11.74□□□□□ -0.53
TRA2B-214ENST00000487615 TNK2Q07912 1038 aa11.74□□□□□ -0.53
TRA2B-214ENST00000487615 FBXL19Q6PCT2 694 aa11.74□□□□□ -0.53
TRA2B-214ENST00000487615 LPCAT2Q7L5N7 544 aa11.74□□□□□ -0.53
TRA2B-214ENST00000487615 RRM2BQ7LG56 351 aa11.74□□□□□ -0.53
TRA2B-214ENST00000487615 SERPINA9Q86WD7 417 aa11.74□□□□□ -0.53
TRA2B-214ENST00000487615 ENDOVQ8N8Q3 282 aaKnown RBP11.74□□□□□ -0.53
TRA2B-214ENST00000487615 OR2T34Q8NGX1 318 aa11.74□□□□□ -0.53
TRA2B-214ENST00000487615 OR2T3Q8NH03 318 aa11.74□□□□□ -0.53
TRA2B-214ENST00000487615 MAGEE2Q8TD90 523 aaPredicted RBP11.74□□□□□ -0.53
TRA2B-214ENST00000487615 ROPN1LQ96C74 230 aa11.74□□□□□ -0.53
TRA2B-214ENST00000487615 NUSAP1Q9BXS6 441 aaKnown RBP11.74□□□□□ -0.53
TRA2B-214ENST00000487615 TNKS2Q9H2K2 1166 aa11.74□□□□□ -0.53
TRA2B-214ENST00000487615 IPPKQ9H8X2 491 aa11.74□□□□□ -0.53
TRA2B-214ENST00000487615 EIF2B4Q9UI10 523 aaKnown RBP11.74□□□□□ -0.53
TRA2B-214ENST00000487615 PNMA8BQ9ULN7 279 aaPredicted RBP11.74□□□□□ -0.53
TRA2B-214ENST00000487615 A0A087WXM4 84 aa11.73□□□□□ -0.53
TRA2B-214ENST00000487615 GRM6O15303 877 aa11.73□□□□□ -0.53
TRA2B-214ENST00000487615 RECQL5O94762 991 aaPredicted RBP11.73□□□□□ -0.53
TRA2B-214ENST00000487615 LYNP07948 512 aa11.73□□□□□ -0.53
TRA2B-214ENST00000487615 GMPRP36959 345 aa11.73□□□□□ -0.53
TRA2B-214ENST00000487615 RPL5P46777 297 aaKnown RBP11.73□□□□□ -0.53
TRA2B-214ENST00000487615 TRAPPC5Q8IUR0 188 aa11.73□□□□□ -0.53
TRA2B-214ENST00000487615 STARD8Q92502 1023 aa11.73□□□□□ -0.53
TRA2B-214ENST00000487615 ESAMQ96AP7 390 aa11.73□□□□□ -0.53
TRA2B-214ENST00000487615 PRR11Q96HE9 360 aaPredicted RBP11.73□□□□□ -0.53
TRA2B-214ENST00000487615 GOLGA4Q13439 2230 aaKnown RBP11.73□□□□□ -0.53
TRA2B-214ENST00000487615 FOCADQ5VW36 1801 aa11.73□□□□□ -0.53
TRA2B-214ENST00000487615 PRR23AA6NEV1 266 aa11.73□□□□□ -0.53
TRA2B-214ENST00000487615 C9JVG2 144 aa11.73□□□□□ -0.53
TRA2B-214ENST00000487615 RNASEH1O60930 286 aaKnown RBP11.73□□□□□ -0.53
TRA2B-214ENST00000487615 TIPRLO75663 272 aa11.73□□□□□ -0.53
TRA2B-214ENST00000487615 OR4F21O95013 312 aa11.73□□□□□ -0.53
TRA2B-214ENST00000487615 POLR2JP52435 117 aaKnown RBP11.73□□□□□ -0.53
TRA2B-214ENST00000487615 THOP1P52888 689 aa11.73□□□□□ -0.53
TRA2B-214ENST00000487615 ZNF621Q6ZSS3 439 aa11.73□□□□□ -0.53
TRA2B-214ENST00000487615 ZBTB2Q8N680 514 aa11.73□□□□□ -0.53
TRA2B-214ENST00000487615 TXNDC5Q8NBS9 432 aaKnown RBP11.73□□□□□ -0.53
TRA2B-214ENST00000487615 BTBD9Q96Q07 612 aa11.73□□□□□ -0.53
TRA2B-214ENST00000487615 AARSD1Q9BTE6 412 aaKnown RBP11.73□□□□□ -0.53
TRA2B-214ENST00000487615 CSNK1G1Q9HCP0 422 aa11.73□□□□□ -0.53
TRA2B-214ENST00000487615 SMIM31A0A1B0GVY4 71 aa11.73□□□□□ -0.53
TRA2B-214ENST00000487615 NEDD8-MDP1E9PL57 170 aa11.73□□□□□ -0.53
TRA2B-214ENST00000487615 ENPP3O14638 875 aa11.73□□□□□ -0.53
TRA2B-214ENST00000487615 NIPSNAP2O75323 286 aa11.73□□□□□ -0.53
TRA2B-214ENST00000487615 GALTP07902 379 aa11.73□□□□□ -0.53
TRA2B-214ENST00000487615 CTNNB1P35222 781 aa11.73□□□□□ -0.53
TRA2B-214ENST00000487615 SERPINB10P48595 397 aa11.73□□□□□ -0.53
TRA2B-214ENST00000487615 HSPA7P48741 367 aa11.73□□□□□ -0.53
TRA2B-214ENST00000487615 STC1P52823 247 aa11.73□□□□□ -0.53
TRA2B-214ENST00000487615 RAB41Q5JT25 222 aa11.73□□□□□ -0.53
TRA2B-214ENST00000487615 ZNF549Q6P9A3 640 aa11.73□□□□□ -0.53
TRA2B-214ENST00000487615 IGSF8Q969P0 613 aa11.73□□□□□ -0.53
TRA2B-214ENST00000487615 ACDQ96AP0 544 aa11.73□□□□□ -0.53
TRA2B-214ENST00000487615 MIPEPQ99797 713 aa11.73□□□□□ -0.53
TRA2B-214ENST00000487615 EURLQ9NYK6 297 aa11.73□□□□□ -0.53
TRA2B-214ENST00000487615 PPM1HQ9ULR3 514 aa11.73□□□□□ -0.53
TRA2B-214ENST00000487615 hCG_2014768A0A024R1R8 64 aa11.72□□□□□ -0.53
TRA2B-214ENST00000487615 KERAO60938 352 aa11.72□□□□□ -0.53
TRA2B-214ENST00000487615 STK16O75716 305 aa11.72□□□□□ -0.53
TRA2B-214ENST00000487615 WDR47O94967 919 aa11.72□□□□□ -0.53
TRA2B-214ENST00000487615 GATMP50440 423 aa11.72□□□□□ -0.53
TRA2B-214ENST00000487615 NUP107P57740 925 aa11.72□□□□□ -0.53
TRA2B-214ENST00000487615 DMC1Q14565 340 aa11.72□□□□□ -0.53
TRA2B-214ENST00000487615 XKR4Q5GH76 650 aa11.72□□□□□ -0.53
TRA2B-214ENST00000487615 ARMC3Q5W041 872 aa11.72□□□□□ -0.53
TRA2B-214ENST00000487615 UBE2R2Q712K3 238 aaPredicted RBP11.72□□□□□ -0.53
TRA2B-214ENST00000487615 ZNF461Q8TAF7 563 aa11.72□□□□□ -0.53
TRA2B-214ENST00000487615 MRPS23Q9Y3D9 190 aaKnown RBP11.72□□□□□ -0.53
TRA2B-214ENST00000487615 ANKRD66B4E2M5 251 aa11.72□□□□□ -0.53
TRA2B-214ENST00000487615 SNAP91O60641 907 aa11.72□□□□□ -0.53
TRA2B-214ENST00000487615 SH3BGRLO75368 114 aa11.72□□□□□ -0.53
TRA2B-214ENST00000487615 CHI3L1P36222 383 aaPredicted RBP11.72□□□□□ -0.53
TRA2B-214ENST00000487615 GNPDA1P46926 289 aa11.72□□□□□ -0.53
TRA2B-214ENST00000487615 LEPRP48357 1165 aaKnown RBP11.72□□□□□ -0.53
TRA2B-214ENST00000487615 DNAJB13P59910 316 aa11.72□□□□□ -0.53
TRA2B-214ENST00000487615 FNDC3BQ53EP0 1204 aaKnown RBP11.72□□□□□ -0.53
TRA2B-214ENST00000487615 ZDHHC20Q5W0Z9 365 aa11.72□□□□□ -0.53
TRA2B-214ENST00000487615 GCNT7Q6ZNI0 430 aa11.72□□□□□ -0.53
TRA2B-214ENST00000487615 DDX51Q8N8A6 666 aaKnown RBP eCLIP11.72□□□□□ -0.53
TRA2B-214ENST00000487615 ATG16L2Q8NAA4 619 aa11.72□□□□□ -0.53
TRA2B-214ENST00000487615 REPS1Q96D71 796 aa11.72□□□□□ -0.53
TRA2B-214ENST00000487615 ZBTB26Q9HCK0 441 aa11.72□□□□□ -0.53
TRA2B-214ENST00000487615 MIEF1Q9NQG6 463 aa11.72□□□□□ -0.53
TRA2B-214ENST00000487615 ZNF711Q9Y462 761 aa11.72□□□□□ -0.53
TRA2B-214ENST00000487615 KIAA1217Q5T5P2 1943 aa11.72□□□□□ -0.53
TRA2B-214ENST00000487615 IFRD1O00458 451 aaPredicted RBP11.72□□□□□ -0.53
TRA2B-214ENST00000487615 EPN2O95208 641 aa11.72□□□□□ -0.53
TRA2B-214ENST00000487615 CAPN1P07384 714 aa11.72□□□□□ -0.53
TRA2B-214ENST00000487615 COX7A2P14406 83 aa11.72□□□□□ -0.53
TRA2B-214ENST00000487615 CSKP41240 450 aa11.72□□□□□ -0.53
TRA2B-214ENST00000487615 CCR10P46092 362 aa11.72□□□□□ -0.53
TRA2B-214ENST00000487615 POM121L1PQ3SYA9 428 aa11.72□□□□□ -0.53
TRA2B-214ENST00000487615 SDE2Q6IQ49 451 aa11.72□□□□□ -0.53
TRA2B-214ENST00000487615 DSG4Q86SJ6 1040 aa11.72□□□□□ -0.53
TRA2B-214ENST00000487615 TSPAN14Q8NG11 270 aa11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms