RNA–Protein interactions for RNA: ENST00000486184.1

NUP50-216, Transcript of nucleoporin 50, humanhuman

TSL 3

Gene NUP50, Length 821 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-216ENST00000486184 CHMP2BQ9UQN3 213 aa11.3□□□□□ -0.6
NUP50-216ENST00000486184 RPS6KL1Q9Y6S9 549 aa11.3□□□□□ -0.6
NUP50-216ENST00000486184 LNP1A1A4G5 178 aa11.29□□□□□ -0.6
NUP50-216ENST00000486184 CCDC162PA2VCL2 907 aa11.29□□□□□ -0.6
NUP50-216ENST00000486184 CFAP99D6REC4 459 aa11.29□□□□□ -0.6
NUP50-216ENST00000486184 PFDN6O15212 129 aa11.29□□□□□ -0.6
NUP50-216ENST00000486184 EIF3HO15372 352 aaKnown RBP eCLIP11.29□□□□□ -0.6
NUP50-216ENST00000486184 UGT1A9O60656 530 aa11.29□□□□□ -0.6
NUP50-216ENST00000486184 BANF1O75531 89 aa11.29□□□□□ -0.6
NUP50-216ENST00000486184 USP1O94782 785 aa11.29□□□□□ -0.6
NUP50-216ENST00000486184 RASGRP1O95267 797 aa11.29□□□□□ -0.6
NUP50-216ENST00000486184 TTC4O95801 387 aa11.29□□□□□ -0.6
NUP50-216ENST00000486184 GOT2P00505 430 aaKnown RBP11.29□□□□□ -0.6
NUP50-216ENST00000486184 TNFP01375 233 aa11.29□□□□□ -0.6
NUP50-216ENST00000486184 CTSEP14091 401 aa11.29□□□□□ -0.6
NUP50-216ENST00000486184 UGT1A6P19224 532 aa11.29□□□□□ -0.6
NUP50-216ENST00000486184 MSH3P20585 1137 aa11.29□□□□□ -0.6
NUP50-216ENST00000486184 UGT1A1P22309 533 aa11.29□□□□□ -0.6
NUP50-216ENST00000486184 UGT1A4P22310 534 aa11.29□□□□□ -0.6
NUP50-216ENST00000486184 UGT1A3P35503 534 aa11.29□□□□□ -0.6
NUP50-216ENST00000486184 UGT1A5P35504 534 aa11.29□□□□□ -0.6
NUP50-216ENST00000486184 ELK3P41970 407 aa11.29□□□□□ -0.6
NUP50-216ENST00000486184 CCT8P50990 548 aa11.29□□□□□ -0.6
NUP50-216ENST00000486184 SRP54P61011 504 aaKnown RBP11.29□□□□□ -0.6
NUP50-216ENST00000486184 ACVR1Q04771 509 aa11.29□□□□□ -0.6
NUP50-216ENST00000486184 PEX6Q13608 980 aa11.29□□□□□ -0.6
NUP50-216ENST00000486184 CUL1Q13616 776 aa11.29□□□□□ -0.6
NUP50-216ENST00000486184 THOC5Q13769 683 aaKnown RBP11.29□□□□□ -0.6
NUP50-216ENST00000486184 FZD2Q14332 565 aa11.29□□□□□ -0.6
NUP50-216ENST00000486184 HLA-BQ31612 363 aa11.29□□□□□ -0.6
NUP50-216ENST00000486184 HP1BP3Q5SSJ5 553 aaPredicted RBP11.29□□□□□ -0.6
NUP50-216ENST00000486184 LYPLAL1Q5VWZ2 237 aa11.29□□□□□ -0.6
NUP50-216ENST00000486184 KIAA0930Q6ICG6 404 aaPredicted RBP11.29□□□□□ -0.6
NUP50-216ENST00000486184 CES3Q6UWW8 571 aa11.29□□□□□ -0.6
NUP50-216ENST00000486184 SPATS2Q86XZ4 545 aaKnown RBP11.29□□□□□ -0.6
NUP50-216ENST00000486184 HID1Q8IV36 788 aa11.29□□□□□ -0.6
NUP50-216ENST00000486184 ANKMY2Q8IV38 441 aa11.29□□□□□ -0.6
NUP50-216ENST00000486184 ZBED8Q8IZ13 594 aa11.29□□□□□ -0.6
NUP50-216ENST00000486184 MINDY1Q8N5J2 469 aa11.29□□□□□ -0.6
NUP50-216ENST00000486184 SERBP1Q8NC51 408 aaKnown RBP eCLIP11.29□□□□□ -0.6
NUP50-216ENST00000486184 OR4L1Q8NH43 312 aa11.29□□□□□ -0.6
NUP50-216ENST00000486184 FBXO25Q8TCJ0 367 aa11.29□□□□□ -0.6
NUP50-216ENST00000486184 HEXDCQ8WVB3 486 aa11.29□□□□□ -0.6
NUP50-216ENST00000486184 SEC14L1Q92503 715 aa11.29□□□□□ -0.6
NUP50-216ENST00000486184 MFSD3Q96ES6 412 aa11.29□□□□□ -0.6
NUP50-216ENST00000486184 CFAP36Q96G28 342 aa11.29□□□□□ -0.6
NUP50-216ENST00000486184 SIGLEC10Q96LC7 697 aa11.29□□□□□ -0.6
NUP50-216ENST00000486184 ZNF778Q96MU6 729 aa11.29□□□□□ -0.6
NUP50-216ENST00000486184 PWWP2AQ96N64 755 aa11.29□□□□□ -0.6
NUP50-216ENST00000486184 ELF4Q99607 663 aaPredicted RBP11.29□□□□□ -0.6
NUP50-216ENST00000486184 EBNA1BP2Q99848 306 aaKnown RBP11.29□□□□□ -0.6
NUP50-216ENST00000486184 LGR4Q9BXB1 951 aa11.29□□□□□ -0.6
NUP50-216ENST00000486184 TSPYL1Q9H0U9 437 aa11.29□□□□□ -0.6
NUP50-216ENST00000486184 FAM96AQ9H5X1 160 aa11.29□□□□□ -0.6
NUP50-216ENST00000486184 SUDS3Q9H7L9 328 aaPredicted RBP11.29□□□□□ -0.6
NUP50-216ENST00000486184 UGT1A7Q9HAW7 530 aa11.29□□□□□ -0.6
NUP50-216ENST00000486184 UGT1A10Q9HAW8 530 aa11.29□□□□□ -0.6
NUP50-216ENST00000486184 UGT1A8Q9HAW9 530 aa11.29□□□□□ -0.6
NUP50-216ENST00000486184 CYP4F12Q9HCS2 524 aa11.29□□□□□ -0.6
NUP50-216ENST00000486184 SAYSD1Q9NPB0 183 aa11.29□□□□□ -0.6
NUP50-216ENST00000486184 GPR27Q9NS67 375 aa11.29□□□□□ -0.6
NUP50-216ENST00000486184 TREX1Q9NSU2 369 aa11.29□□□□□ -0.6
NUP50-216ENST00000486184 CATSPERZQ9NTU4 200 aa11.29□□□□□ -0.6
NUP50-216ENST00000486184 SMOXQ9NWM0 555 aa11.29□□□□□ -0.6
NUP50-216ENST00000486184 VPS18Q9P253 973 aa11.29□□□□□ -0.6
NUP50-216ENST00000486184 APOBEC3BQ9UH17 382 aaKnown RBP11.29□□□□□ -0.6
NUP50-216ENST00000486184 PRSS38A1L453 326 aa11.28□□□□□ -0.6
NUP50-216ENST00000486184 TMEM202A6NGA9 273 aa11.28□□□□□ -0.6
NUP50-216ENST00000486184 OR51F1A6NGY5 319 aa11.28□□□□□ -0.6
NUP50-216ENST00000486184 GPR89AB7ZAQ6 455 aa11.28□□□□□ -0.6
NUP50-216ENST00000486184 GAPDHSO14556 408 aaPredicted RBP11.28□□□□□ -0.6
NUP50-216ENST00000486184 TNFRSF10CO14798 259 aa11.28□□□□□ -0.6
NUP50-216ENST00000486184 VEGFDO43915 354 aa11.28□□□□□ -0.6
NUP50-216ENST00000486184 VAPBO95292 243 aa11.28□□□□□ -0.6
NUP50-216ENST00000486184 GPR89BP0CG08 455 aa11.28□□□□□ -0.6
NUP50-216ENST00000486184 JUNDP17535 347 aa11.28□□□□□ -0.6
NUP50-216ENST00000486184 PMLP29590 882 aa11.28□□□□□ -0.6
NUP50-216ENST00000486184 ARSDP51689 593 aa11.28□□□□□ -0.6
NUP50-216ENST00000486184 HNRNPKP61978 463 aaKnown RBP eCLIP11.28□□□□□ -0.6
NUP50-216ENST00000486184 XIAPP98170 497 aa11.28□□□□□ -0.6
NUP50-216ENST00000486184 LONRF1Q17RB8 773 aa11.28□□□□□ -0.6
NUP50-216ENST00000486184 ZNF423Q2M1K9 1284 aa11.28□□□□□ -0.6
NUP50-216ENST00000486184 ANKRD20A4Q4UJ75 823 aa11.28□□□□□ -0.6
NUP50-216ENST00000486184 MSS51Q4VC12 460 aa11.28□□□□□ -0.6
NUP50-216ENST00000486184 ZNF542PQ5EBM4 170 aa11.28□□□□□ -0.6
NUP50-216ENST00000486184 SPANXN3Q5MJ09 141 aa11.28□□□□□ -0.6
NUP50-216ENST00000486184 TPRG1LQ5T0D9 272 aa11.28□□□□□ -0.6
NUP50-216ENST00000486184 GPRC6AQ5T6X5 926 aa11.28□□□□□ -0.6
NUP50-216ENST00000486184 MRNIPQ6NTE8 343 aa11.28□□□□□ -0.6
NUP50-216ENST00000486184 MARK2Q7KZI7 788 aaKnown RBP11.28□□□□□ -0.6
NUP50-216ENST00000486184 SDCCAG8Q86SQ7 713 aaPredicted RBP11.28□□□□□ -0.6
NUP50-216ENST00000486184 GALNT13Q8IUC8 556 aa11.28□□□□□ -0.6
NUP50-216ENST00000486184 PALM2Q8IXS6 379 aa11.28□□□□□ -0.6
NUP50-216ENST00000486184 PHACTR4Q8IZ21 702 aa11.28□□□□□ -0.6
NUP50-216ENST00000486184 NXPE1Q8N323 547 aa11.28□□□□□ -0.6
NUP50-216ENST00000486184 LRRN4CLQ8ND94 238 aa11.28□□□□□ -0.6
NUP50-216ENST00000486184 FBXO36Q8NEA4 188 aa11.28□□□□□ -0.6
NUP50-216ENST00000486184 DDHD1Q8NEL9 900 aa11.28□□□□□ -0.6
NUP50-216ENST00000486184 PYROXD1Q8WU10 500 aa11.28□□□□□ -0.6
NUP50-216ENST00000486184 TSACCQ96A04 125 aaPredicted RBP11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms