RNA–Protein interactions for RNA: ENST00000485618.1

SF3A1-208, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 2

Gene SF3A1, Length 593 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-208ENST00000485618 VPS35Q96QK1 796 aa8.21□□□□□ -1.1
SF3A1-208ENST00000485618 CDC6Q99741 560 aa8.21□□□□□ -1.1
SF3A1-208ENST00000485618 GORASP1Q9BQQ3 440 aa8.21□□□□□ -1.1
SF3A1-208ENST00000485618 FOXP3Q9BZS1 431 aa8.21□□□□□ -1.1
SF3A1-208ENST00000485618 IL26Q9NPH9 171 aa8.21□□□□□ -1.1
SF3A1-208ENST00000485618 TM7SF3Q9NS93 570 aa8.21□□□□□ -1.1
SF3A1-208ENST00000485618 VPS18Q9P253 973 aa8.21□□□□□ -1.1
SF3A1-208ENST00000485618 CRLS1Q9UJA2 301 aa8.21□□□□□ -1.1
SF3A1-208ENST00000485618 MOSPD1Q9UJG1 213 aa8.21□□□□□ -1.1
SF3A1-208ENST00000485618 TCAF1Q9Y4C2 921 aa8.21□□□□□ -1.1
SF3A1-208ENST00000485618 ARL5AQ9Y689 179 aa8.21□□□□□ -1.1
SF3A1-208ENST00000485618 MAD1L1Q9Y6D9 718 aa8.21□□□□□ -1.1
SF3A1-208ENST00000485618 CSNK1G3Q9Y6M4 447 aa8.21□□□□□ -1.1
SF3A1-208ENST00000485618 DGKBQ9Y6T7 804 aa8.21□□□□□ -1.1
SF3A1-208ENST00000485618 A0A1B0GTQ1 180 aa8.2□□□□□ -1.1
SF3A1-208ENST00000485618 TMEM8BA6NDV4 472 aa8.2□□□□□ -1.1
SF3A1-208ENST00000485618 H0Y8X5 98 aa8.2□□□□□ -1.1
SF3A1-208ENST00000485618 H7C0S8 307 aa8.2□□□□□ -1.1
SF3A1-208ENST00000485618 QSOX1O00391 747 aa8.2□□□□□ -1.1
SF3A1-208ENST00000485618 CDX4O14627 284 aaPredicted RBP8.2□□□□□ -1.1
SF3A1-208ENST00000485618 AURKAO14965 403 aa8.2□□□□□ -1.1
SF3A1-208ENST00000485618 INPP4BO15327 924 aa8.2□□□□□ -1.1
SF3A1-208ENST00000485618 FLRT2O43155 660 aa8.2□□□□□ -1.1
SF3A1-208ENST00000485618 LDB2O43679 373 aa8.2□□□□□ -1.1
SF3A1-208ENST00000485618 SEC31AO94979 1220 aaKnown RBP8.2□□□□□ -1.1
SF3A1-208ENST00000485618 WNT1P04628 370 aa8.2□□□□□ -1.1
SF3A1-208ENST00000485618 IVLP07476 585 aa8.2□□□□□ -1.1
SF3A1-208ENST00000485618 ANXA6P08133 673 aa8.2□□□□□ -1.1
SF3A1-208ENST00000485618 GSTM1P09488 218 aa8.2□□□□□ -1.1
SF3A1-208ENST00000485618 SLC2A4P14672 509 aa8.2□□□□□ -1.1
SF3A1-208ENST00000485618 NME1P15531 152 aaKnown RBP8.2□□□□□ -1.1
SF3A1-208ENST00000485618 AKT1P31749 480 aa8.2□□□□□ -1.1
SF3A1-208ENST00000485618 DEKP35659 375 aaKnown RBP8.2□□□□□ -1.1
SF3A1-208ENST00000485618 GRK6P43250 576 aa8.2□□□□□ -1.1
SF3A1-208ENST00000485618 TTPAP49638 278 aa8.2□□□□□ -1.1
SF3A1-208ENST00000485618 DUSP3P51452 185 aaPredicted RBP8.2□□□□□ -1.1
SF3A1-208ENST00000485618 ZNF140P52738 457 aaPredicted RBP8.2□□□□□ -1.1
SF3A1-208ENST00000485618 HK3P52790 923 aa8.2□□□□□ -1.1
SF3A1-208ENST00000485618 TERF1P54274 439 aa8.2□□□□□ -1.1
SF3A1-208ENST00000485618 GSTM4Q03013 218 aa8.2□□□□□ -1.1
SF3A1-208ENST00000485618 C2orf54Q08AI8 447 aa8.2□□□□□ -1.1
SF3A1-208ENST00000485618 ILF3Q12906 894 aaKnown RBP eCLIP8.2□□□□□ -1.1
SF3A1-208ENST00000485618 NFATC2Q13469 925 aa8.2□□□□□ -1.1
SF3A1-208ENST00000485618 THOC5Q13769 683 aaKnown RBP8.2□□□□□ -1.1
SF3A1-208ENST00000485618 FZD2Q14332 565 aa8.2□□□□□ -1.1
SF3A1-208ENST00000485618 CHRNA6Q15825 494 aa8.2□□□□□ -1.1
SF3A1-208ENST00000485618 HIF1AQ16665 826 aa8.2□□□□□ -1.1
SF3A1-208ENST00000485618 FASTKD1Q53R41 847 aaKnown RBP8.2□□□□□ -1.1
SF3A1-208ENST00000485618 ZRANB3Q5FWF4 1079 aa8.2□□□□□ -1.1
SF3A1-208ENST00000485618 TSTD2Q5T7W7 516 aa8.2□□□□□ -1.1
SF3A1-208ENST00000485618 FAM151BQ6UXP7 276 aa8.2□□□□□ -1.1
SF3A1-208ENST00000485618 CENPUQ71F23 418 aa8.2□□□□□ -1.1
SF3A1-208ENST00000485618 TAS2R42Q7RTR8 314 aa8.2□□□□□ -1.1
SF3A1-208ENST00000485618 RD3Q7Z3Z2 195 aa8.2□□□□□ -1.1
SF3A1-208ENST00000485618 HID1Q8IV36 788 aa8.2□□□□□ -1.1
SF3A1-208ENST00000485618 LMNTD2Q8IXW0 634 aa8.2□□□□□ -1.1
SF3A1-208ENST00000485618 MPP5Q8N3R9 675 aa8.2□□□□□ -1.1
SF3A1-208ENST00000485618 MMGT1Q8N4V1 131 aa8.2□□□□□ -1.1
SF3A1-208ENST00000485618 BEND7Q8N7W2 519 aaPredicted RBP8.2□□□□□ -1.1
SF3A1-208ENST00000485618 NAT8LQ8N9F0 302 aa8.2□□□□□ -1.1
SF3A1-208ENST00000485618 PLA2G15Q8NCC3 412 aa8.2□□□□□ -1.1
SF3A1-208ENST00000485618 GPR26Q8NDV2 337 aa8.2□□□□□ -1.1
SF3A1-208ENST00000485618 OR4L1Q8NH43 312 aa8.2□□□□□ -1.1
SF3A1-208ENST00000485618 CALML6Q8TD86 181 aa8.2□□□□□ -1.1
SF3A1-208ENST00000485618 SETD7Q8WTS6 366 aaKnown RBP8.2□□□□□ -1.1
SF3A1-208ENST00000485618 CDKN2AIPNLQ96HQ2 116 aa8.2□□□□□ -1.1
SF3A1-208ENST00000485618 SGSM3Q96HU1 749 aa8.2□□□□□ -1.1
SF3A1-208ENST00000485618 SERPINB12Q96P63 405 aa8.2□□□□□ -1.1
SF3A1-208ENST00000485618 SMIM14Q96QK8 99 aa8.2□□□□□ -1.1
SF3A1-208ENST00000485618 TCF12Q99081 682 aa8.2□□□□□ -1.1
SF3A1-208ENST00000485618 COPS8Q99627 209 aa8.2□□□□□ -1.1
SF3A1-208ENST00000485618 KIFC1Q9BW19 673 aa8.2□□□□□ -1.1
SF3A1-208ENST00000485618 SCNM1Q9BWG6 230 aa8.2□□□□□ -1.1
SF3A1-208ENST00000485618 TSSK1BQ9BXA7 367 aa8.2□□□□□ -1.1
SF3A1-208ENST00000485618 GSDMCQ9BYG8 508 aa8.2□□□□□ -1.1
SF3A1-208ENST00000485618 TRIM31Q9BZY9 425 aa8.2□□□□□ -1.1
SF3A1-208ENST00000485618 ASB8Q9H765 288 aa8.2□□□□□ -1.1
SF3A1-208ENST00000485618 FAM114A2Q9NRY5 505 aa8.2□□□□□ -1.1
SF3A1-208ENST00000485618 SMOXQ9NWM0 555 aa8.2□□□□□ -1.1
SF3A1-208ENST00000485618 TRNAU1APQ9NX07 287 aaKnown RBP8.2□□□□□ -1.1
SF3A1-208ENST00000485618 MTRF1LQ9UGC7 380 aaKnown RBP8.2□□□□□ -1.1
SF3A1-208ENST00000485618 APOBEC3BQ9UH17 382 aaKnown RBP8.2□□□□□ -1.1
SF3A1-208ENST00000485618 ZNHIT2Q9UHR6 403 aa8.2□□□□□ -1.1
SF3A1-208ENST00000485618 SOX13Q9UN79 622 aa8.2□□□□□ -1.1
SF3A1-208ENST00000485618 CA5BQ9Y2D0 317 aa8.2□□□□□ -1.1
SF3A1-208ENST00000485618 FAM237BA0A1B0GVD1 139 aa8.19□□□□□ -1.1
SF3A1-208ENST00000485618 PRSS38A1L453 326 aa8.19□□□□□ -1.1
SF3A1-208ENST00000485618 GOLGA8MH3BSY2 632 aa8.19□□□□□ -1.1
SF3A1-208ENST00000485618 K7ESM1 405 aa8.19□□□□□ -1.1
SF3A1-208ENST00000485618 TPP1O14773 563 aa8.19□□□□□ -1.1
SF3A1-208ENST00000485618 SCAMP1O15126 338 aa8.19□□□□□ -1.1
SF3A1-208ENST00000485618 KMOO15229 486 aa8.19□□□□□ -1.1
SF3A1-208ENST00000485618 FANCGO15287 622 aa8.19□□□□□ -1.1
SF3A1-208ENST00000485618 EIF3HO15372 352 aaKnown RBP eCLIP8.19□□□□□ -1.1
SF3A1-208ENST00000485618 AQP9O43315 295 aa8.19□□□□□ -1.1
SF3A1-208ENST00000485618 RAD51CO43502 376 aa8.19□□□□□ -1.1
SF3A1-208ENST00000485618 BUD23O43709 281 aaKnown RBP8.19□□□□□ -1.1
SF3A1-208ENST00000485618 HYAL3O43820 417 aaPredicted RBP8.19□□□□□ -1.1
SF3A1-208ENST00000485618 USP1O94782 785 aa8.19□□□□□ -1.1
SF3A1-208ENST00000485618 CDK14O94921 469 aa8.19□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms