RNA–Protein interactions for RNA: ENST00000483407.1

CSDE1-207, Transcript of cold shock domain containing E1, humanhuman

TSL 2

Gene CSDE1, Length 741 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-207ENST00000483407 TNPO3Q9Y5L0 923 aaKnown RBP5.91□□□□□ -1.46
CSDE1-207ENST00000483407 U3KQE9 123 aa5.91□□□□□ -1.46
CSDE1-207ENST00000483407 SHROOM3Q8TF72 1996 aa5.91□□□□□ -1.46
CSDE1-207ENST00000483407 TCRBV16S1A1N1A0A5B0 115 aa5.9□□□□□ -1.46
CSDE1-207ENST00000483407 PMS2P1A4D2B8 440 aa5.9□□□□□ -1.46
CSDE1-207ENST00000483407 C2CD4BA6NLJ0 364 aa5.9□□□□□ -1.46
CSDE1-207ENST00000483407 F8VZ95 297 aa5.9□□□□□ -1.46
CSDE1-207ENST00000483407 FAM72CH0Y354 149 aa5.9□□□□□ -1.46
CSDE1-207ENST00000483407 NVLO15381 856 aaKnown RBP5.9□□□□□ -1.46
CSDE1-207ENST00000483407 ARHGAP6O43182 974 aa5.9□□□□□ -1.46
CSDE1-207ENST00000483407 TNFP01375 233 aa5.9□□□□□ -1.46
CSDE1-207ENST00000483407 KRT3P12035 628 aa5.9□□□□□ -1.46
CSDE1-207ENST00000483407 IFNGR1P15260 489 aa5.9□□□□□ -1.46
CSDE1-207ENST00000483407 DESP17661 470 aa5.9□□□□□ -1.46
CSDE1-207ENST00000483407 MMP8P22894 467 aa5.9□□□□□ -1.46
CSDE1-207ENST00000483407 KELP23276 732 aa5.9□□□□□ -1.46
CSDE1-207ENST00000483407 EPHB2P29323 1055 aa5.9□□□□□ -1.46
CSDE1-207ENST00000483407 SLC5A2P31639 672 aa5.9□□□□□ -1.46
CSDE1-207ENST00000483407 CCKBRP32239 447 aa5.9□□□□□ -1.46
CSDE1-207ENST00000483407 UGT1A5P35504 534 aa5.9□□□□□ -1.46
CSDE1-207ENST00000483407 PTPN9P43378 593 aa5.9□□□□□ -1.46
CSDE1-207ENST00000483407 CDKN1CP49918 316 aaPredicted RBP5.9□□□□□ -1.46
CSDE1-207ENST00000483407 CSRP3P50461 194 aa5.9□□□□□ -1.46
CSDE1-207ENST00000483407 YBEYP58557 167 aaPredicted RBP5.9□□□□□ -1.46
CSDE1-207ENST00000483407 SRP54P61011 504 aaKnown RBP5.9□□□□□ -1.46
CSDE1-207ENST00000483407 CCL7P80098 99 aa5.9□□□□□ -1.46
CSDE1-207ENST00000483407 NFATC3Q12968 1075 aa5.9□□□□□ -1.46
CSDE1-207ENST00000483407 C15orf59Q2T9L4 293 aaPredicted RBP5.9□□□□□ -1.46
CSDE1-207ENST00000483407 ALG11Q2TAA5 492 aa5.9□□□□□ -1.46
CSDE1-207ENST00000483407 WSCD2Q2TBF2 565 aa5.9□□□□□ -1.46
CSDE1-207ENST00000483407 PARP15Q460N3 678 aa5.9□□□□□ -1.46
CSDE1-207ENST00000483407 CCDC14Q49A88 953 aa5.9□□□□□ -1.46
CSDE1-207ENST00000483407 TMEM52BQ4KMG9 183 aa5.9□□□□□ -1.46
CSDE1-207ENST00000483407 MANEAQ5SRI9 462 aa5.9□□□□□ -1.46
CSDE1-207ENST00000483407 ARTNQ5T4W7 220 aa5.9□□□□□ -1.46
CSDE1-207ENST00000483407 FAM72AQ5TYM5 149 aa5.9□□□□□ -1.46
CSDE1-207ENST00000483407 E4F1Q66K89 784 aaPredicted RBP5.9□□□□□ -1.46
CSDE1-207ENST00000483407 FAM72DQ6L9T8 149 aa5.9□□□□□ -1.46
CSDE1-207ENST00000483407 TRIM72Q6ZMU5 477 aa5.9□□□□□ -1.46
CSDE1-207ENST00000483407 RD3Q7Z3Z2 195 aa5.9□□□□□ -1.46
CSDE1-207ENST00000483407 THAP5Q7Z6K1 395 aa5.9□□□□□ -1.46
CSDE1-207ENST00000483407 B3GNT8Q7Z7M8 397 aa5.9□□□□□ -1.46
CSDE1-207ENST00000483407 FAM72BQ86X60 149 aa5.9□□□□□ -1.46
CSDE1-207ENST00000483407 DNAAF5Q86Y56 855 aa5.9□□□□□ -1.46
CSDE1-207ENST00000483407 PPIL6Q8IXY8 311 aa5.9□□□□□ -1.46
CSDE1-207ENST00000483407 PAF1Q8N7H5 531 aa5.9□□□□□ -1.46
CSDE1-207ENST00000483407 RTL3Q8N8U3 475 aaKnown RBP5.9□□□□□ -1.46
CSDE1-207ENST00000483407 HCAR2Q8TDS4 363 aa5.9□□□□□ -1.46
CSDE1-207ENST00000483407 FAM172AQ8WUF8 416 aa5.9□□□□□ -1.46
CSDE1-207ENST00000483407 TSACCQ96A04 125 aaPredicted RBP5.9□□□□□ -1.46
CSDE1-207ENST00000483407 NTAN1Q96AB6 310 aa5.9□□□□□ -1.46
CSDE1-207ENST00000483407 HMCESQ96FZ2 354 aa5.9□□□□□ -1.46
CSDE1-207ENST00000483407 WDR92Q96MX6 357 aa5.9□□□□□ -1.46
CSDE1-207ENST00000483407 CMKLR1Q99788 373 aa5.9□□□□□ -1.46
CSDE1-207ENST00000483407 C11orf70Q9BRQ4 267 aa5.9□□□□□ -1.46
CSDE1-207ENST00000483407 APOOQ9BUR5 198 aa5.9□□□□□ -1.46
CSDE1-207ENST00000483407 SELENOOQ9BVL4 669 aa5.9□□□□□ -1.46
CSDE1-207ENST00000483407 STK33Q9BYT3 514 aa5.9□□□□□ -1.46
CSDE1-207ENST00000483407 FOXP3Q9BZS1 431 aa5.9□□□□□ -1.46
CSDE1-207ENST00000483407 LRRN3Q9H3W5 708 aa5.9□□□□□ -1.46
CSDE1-207ENST00000483407 CATSPERBQ9H7T0 1116 aa5.9□□□□□ -1.46
CSDE1-207ENST00000483407 AKAP7Q9P0M2 348 aaPredicted RBP5.9□□□□□ -1.46
CSDE1-207ENST00000483407 UBA2Q9UBT2 640 aaPredicted RBP5.9□□□□□ -1.46
CSDE1-207ENST00000483407 PISDQ9UG56 409 aa5.9□□□□□ -1.46
CSDE1-207ENST00000483407 ACSL6Q9UKU0 697 aa5.9□□□□□ -1.46
CSDE1-207ENST00000483407 PNMA8BQ9ULN7 279 aaPredicted RBP5.9□□□□□ -1.46
CSDE1-207ENST00000483407 DAAM1Q9Y4D1 1078 aa5.9□□□□□ -1.46
CSDE1-207ENST00000483407 LOXL2Q9Y4K0 774 aa5.9□□□□□ -1.46
CSDE1-207ENST00000483407 TENM4Q6N022 2769 aa5.9□□□□□ -1.47
CSDE1-207ENST00000483407 KALRNO60229 2985 aa5.9□□□□□ -1.47
CSDE1-207ENST00000483407 TP53BP1Q12888 1972 aaPredicted RBP5.89□□□□□ -1.47
CSDE1-207ENST00000483407 A0A1W2PQM1 296 aa5.89□□□□□ -1.47
CSDE1-207ENST00000483407 RASA4BC9J798 803 aa5.89□□□□□ -1.47
CSDE1-207ENST00000483407 PYCARD-AS1I3L0S3 204 aa5.89□□□□□ -1.47
CSDE1-207ENST00000483407 CACNB4O00305 520 aaPredicted RBP5.89□□□□□ -1.47
CSDE1-207ENST00000483407 ZW10O43264 779 aa5.89□□□□□ -1.47
CSDE1-207ENST00000483407 RASA4O43374 803 aa5.89□□□□□ -1.47
CSDE1-207ENST00000483407 CREB3O43889 395 aa5.89□□□□□ -1.47
CSDE1-207ENST00000483407 GFPT2O94808 682 aa5.89□□□□□ -1.47
CSDE1-207ENST00000483407 PIGNO95427 931 aa5.89□□□□□ -1.47
CSDE1-207ENST00000483407 CRTAMO95727 393 aa5.89□□□□□ -1.47
CSDE1-207ENST00000483407 CYP1A1P04798 512 aaPredicted RBP5.89□□□□□ -1.47
CSDE1-207ENST00000483407 PCCBP05166 539 aa5.89□□□□□ -1.47
CSDE1-207ENST00000483407 CEACAM5P06731 702 aa5.89□□□□□ -1.47
CSDE1-207ENST00000483407 TPM2P07951 284 aa5.89□□□□□ -1.47
CSDE1-207ENST00000483407 HGFP14210 728 aa5.89□□□□□ -1.47
CSDE1-207ENST00000483407 PNLIPP16233 465 aa5.89□□□□□ -1.47
CSDE1-207ENST00000483407 NAT1P18440 290 aa5.89□□□□□ -1.47
CSDE1-207ENST00000483407 GPD1P21695 349 aa5.89□□□□□ -1.47
CSDE1-207ENST00000483407 CD82P27701 267 aa5.89□□□□□ -1.47
CSDE1-207ENST00000483407 TPP2P29144 1249 aaPredicted RBP5.89□□□□□ -1.47
CSDE1-207ENST00000483407 NSFP46459 744 aaKnown RBP5.89□□□□□ -1.47
CSDE1-207ENST00000483407 SEPHS1P49903 392 aa5.89□□□□□ -1.47
CSDE1-207ENST00000483407 CLCN7P51798 805 aa5.89□□□□□ -1.47
CSDE1-207ENST00000483407 HDAC4P56524 1084 aa5.89□□□□□ -1.47
CSDE1-207ENST00000483407 PCBP3P57721 371 aaKnown RBP5.89□□□□□ -1.47
CSDE1-207ENST00000483407 UBE2HP62256 183 aa5.89□□□□□ -1.47
CSDE1-207ENST00000483407 CDR2Q01850 454 aa5.89□□□□□ -1.47
CSDE1-207ENST00000483407 MTM1Q13496 603 aa5.89□□□□□ -1.47
CSDE1-207ENST00000483407 ARHGEF7Q14155 803 aa5.89□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms