RNA–Protein interactions for RNA: ENST00000474828.1

SCAF11-206, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 2

Gene SCAF11, Length 757 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-206ENST00000474828 ST14Q9Y5Y6 855 aa16.78■□□□□ 0.28
SCAF11-206ENST00000474828 MYLKQ15746 1914 aa16.77■□□□□ 0.28
SCAF11-206ENST00000474828 IGLV3-16A0A075B6K0 115 aa16.77■□□□□ 0.28
SCAF11-206ENST00000474828 SMAPO00193 183 aa16.77■□□□□ 0.28
SCAF11-206ENST00000474828 VEGFDO43915 354 aa16.77■□□□□ 0.28
SCAF11-206ENST00000474828 NUAK1O60285 661 aa16.77■□□□□ 0.28
SCAF11-206ENST00000474828 PRAMEF1O95521 474 aa16.77■□□□□ 0.28
SCAF11-206ENST00000474828 POLD2P49005 469 aa16.77■□□□□ 0.28
SCAF11-206ENST00000474828 VPS41P49754 854 aa16.77■□□□□ 0.28
SCAF11-206ENST00000474828 SARNPP82979 210 aaKnown RBP16.77■□□□□ 0.28
SCAF11-206ENST00000474828 ELOCQ15369 112 aa16.77■□□□□ 0.28
SCAF11-206ENST00000474828 PPP1R7Q15435 360 aa16.77■□□□□ 0.28
SCAF11-206ENST00000474828 KCTD19Q17RG1 926 aaPredicted RBP16.77■□□□□ 0.28
SCAF11-206ENST00000474828 WHAMMP3Q1A5X7 153 aa16.77■□□□□ 0.28
SCAF11-206ENST00000474828 SKIDA1Q1XH10 827 aa16.77■□□□□ 0.28
SCAF11-206ENST00000474828 KHDC1Q4VXA5 237 aaKnown RBP16.77■□□□□ 0.28
SCAF11-206ENST00000474828 PRRT3Q5FWE3 981 aa16.77■□□□□ 0.28
SCAF11-206ENST00000474828 TSTD2Q5T7W7 516 aa16.77■□□□□ 0.28
SCAF11-206ENST00000474828 PCGF5Q86SE9 256 aa16.77■□□□□ 0.28
SCAF11-206ENST00000474828 ADGRG6Q86SQ4 1221 aa16.77■□□□□ 0.28
SCAF11-206ENST00000474828 HID1Q8IV36 788 aa16.77■□□□□ 0.28
SCAF11-206ENST00000474828 KLHL7Q8IXQ5 586 aa16.77■□□□□ 0.28
SCAF11-206ENST00000474828 DUSP23Q9BVJ7 150 aa16.77■□□□□ 0.28
SCAF11-206ENST00000474828 BOCQ9BWV1 1114 aa16.77■□□□□ 0.28
SCAF11-206ENST00000474828 TREX1Q9NSU2 369 aa16.77■□□□□ 0.28
SCAF11-206ENST00000474828 ATXN10Q9UBB4 475 aa16.77■□□□□ 0.28
SCAF11-206ENST00000474828 SUFUQ9UMX1 484 aa16.77■□□□□ 0.28
SCAF11-206ENST00000474828 PCYT1BQ9Y5K3 369 aaPredicted RBP16.77■□□□□ 0.28
SCAF11-206ENST00000474828 ARID1BQ8NFD5 2236 aaPredicted RBP16.77■□□□□ 0.27
SCAF11-206ENST00000474828 FAM187AA6NFU0 413 aa16.76■□□□□ 0.27
SCAF11-206ENST00000474828 TRIM38O00635 465 aa16.76■□□□□ 0.27
SCAF11-206ENST00000474828 INPP4BO15327 924 aa16.76■□□□□ 0.27
SCAF11-206ENST00000474828 TTI1O43156 1089 aa16.76■□□□□ 0.27
SCAF11-206ENST00000474828 UGT1A9O60656 530 aa16.76■□□□□ 0.27
SCAF11-206ENST00000474828 SDC3O75056 442 aa16.76■□□□□ 0.27
SCAF11-206ENST00000474828 SLC25A14O95258 325 aaPredicted RBP16.76■□□□□ 0.27
SCAF11-206ENST00000474828 KCNK5O95279 499 aa16.76■□□□□ 0.27
SCAF11-206ENST00000474828 SLC4A1P02730 911 aa16.76■□□□□ 0.27
SCAF11-206ENST00000474828 UGT1A6P19224 532 aa16.76■□□□□ 0.27
SCAF11-206ENST00000474828 UGT1A1P22309 533 aa16.76■□□□□ 0.27
SCAF11-206ENST00000474828 UGT1A4P22310 534 aa16.76■□□□□ 0.27
SCAF11-206ENST00000474828 UGT1A3P35503 534 aa16.76■□□□□ 0.27
SCAF11-206ENST00000474828 UGT1A5P35504 534 aa16.76■□□□□ 0.27
SCAF11-206ENST00000474828 ARSDP51689 593 aa16.76■□□□□ 0.27
SCAF11-206ENST00000474828 CLCNKAP51800 687 aa16.76■□□□□ 0.27
SCAF11-206ENST00000474828 LRP8Q14114 963 aa16.76■□□□□ 0.27
SCAF11-206ENST00000474828 LDLRAP1Q5SW96 308 aa16.76■□□□□ 0.27
SCAF11-206ENST00000474828 OGFOD3Q6PK18 319 aa16.76■□□□□ 0.27
SCAF11-206ENST00000474828 FAM151BQ6UXP7 276 aa16.76■□□□□ 0.27
SCAF11-206ENST00000474828 SNX20Q7Z614 316 aa16.76■□□□□ 0.27
SCAF11-206ENST00000474828 TRIM74Q86UV6 250 aa16.76■□□□□ 0.27
SCAF11-206ENST00000474828 NRROSQ86YC3 692 aa16.76■□□□□ 0.27
SCAF11-206ENST00000474828 RHBDD1Q8TEB9 315 aa16.76■□□□□ 0.27
SCAF11-206ENST00000474828 ZNF778Q96MU6 729 aa16.76■□□□□ 0.27
SCAF11-206ENST00000474828 CAMK1GQ96NX5 476 aa16.76■□□□□ 0.27
SCAF11-206ENST00000474828 SERPINB12Q96P63 405 aa16.76■□□□□ 0.27
SCAF11-206ENST00000474828 KRT12Q99456 494 aa16.76■□□□□ 0.27
SCAF11-206ENST00000474828 TMEM168Q9H0V1 697 aa16.76■□□□□ 0.27
SCAF11-206ENST00000474828 SLC32A1Q9H598 525 aa16.76■□□□□ 0.27
SCAF11-206ENST00000474828 UGT1A7Q9HAW7 530 aa16.76■□□□□ 0.27
SCAF11-206ENST00000474828 UGT1A10Q9HAW8 530 aa16.76■□□□□ 0.27
SCAF11-206ENST00000474828 UGT1A8Q9HAW9 530 aa16.76■□□□□ 0.27
SCAF11-206ENST00000474828 CYP4F12Q9HCS2 524 aa16.76■□□□□ 0.27
SCAF11-206ENST00000474828 BFARQ9NZS9 450 aa16.76■□□□□ 0.27
SCAF11-206ENST00000474828 TMEM98Q9Y2Y6 226 aa16.76■□□□□ 0.27
SCAF11-206ENST00000474828 MRFAP1Q9Y605 127 aa16.76■□□□□ 0.27
SCAF11-206ENST00000474828 LY6G6EA0A0G2JKS1 128 aa16.75■□□□□ 0.27
SCAF11-206ENST00000474828 MAGEB16A2A368 324 aa16.75■□□□□ 0.27
SCAF11-206ENST00000474828 YY2O15391 372 aa16.75■□□□□ 0.27
SCAF11-206ENST00000474828 ADCY8P40145 1251 aa16.75■□□□□ 0.27
SCAF11-206ENST00000474828 CKAP4Q07065 602 aaKnown RBP16.75■□□□□ 0.27
SCAF11-206ENST00000474828 MORF4L2Q15014 288 aa16.75■□□□□ 0.27
SCAF11-206ENST00000474828 CCDC38Q502W7 563 aa16.75■□□□□ 0.27
SCAF11-206ENST00000474828 GPRC6AQ5T6X5 926 aa16.75■□□□□ 0.27
SCAF11-206ENST00000474828 HIBCHQ6NVY1 386 aaPredicted RBP16.75■□□□□ 0.27
SCAF11-206ENST00000474828 ZCCHC8Q6NZY4 707 aaKnown RBP16.75■□□□□ 0.27
SCAF11-206ENST00000474828 MAATS1Q7Z4T9 603 aa16.75■□□□□ 0.27
SCAF11-206ENST00000474828 C17orf82Q86X59 251 aaPredicted RBP16.75■□□□□ 0.27
SCAF11-206ENST00000474828 ZNF547Q8IVP9 402 aa16.75■□□□□ 0.27
SCAF11-206ENST00000474828 AGGF1Q8N302 714 aaeCLIP16.75■□□□□ 0.27
SCAF11-206ENST00000474828 ULK4Q96C45 1275 aa16.75■□□□□ 0.27
SCAF11-206ENST00000474828 SIGLEC10Q96LC7 697 aa16.75■□□□□ 0.27
SCAF11-206ENST00000474828 CARS2Q9HA77 564 aaKnown RBP16.75■□□□□ 0.27
SCAF11-206ENST00000474828 TOR4AQ9NXH8 423 aa16.75■□□□□ 0.27
SCAF11-206ENST00000474828 SOX13Q9UN79 622 aa16.75■□□□□ 0.27
SCAF11-206ENST00000474828 GPR34Q9UPC5 381 aa16.75■□□□□ 0.27
SCAF11-206ENST00000474828 U3KQA8 63 aa16.75■□□□□ 0.27
SCAF11-206ENST00000474828 PCNX2A6NKB5 2137 aa16.74■□□□□ 0.27
SCAF11-206ENST00000474828 BHMG1C9JSJ3 638 aaPredicted RBP16.74■□□□□ 0.27
SCAF11-206ENST00000474828 GPR39O43194 453 aa16.74■□□□□ 0.27
SCAF11-206ENST00000474828 TNFSF14O43557 240 aa16.74■□□□□ 0.27
SCAF11-206ENST00000474828 SEC31AO94979 1220 aaKnown RBP16.74■□□□□ 0.27
SCAF11-206ENST00000474828 CELA2BP08218 269 aaPredicted RBP16.74■□□□□ 0.27
SCAF11-206ENST00000474828 ZNF8P17098 575 aaPredicted RBP16.74■□□□□ 0.27
SCAF11-206ENST00000474828 MC4RP32245 332 aa16.74■□□□□ 0.27
SCAF11-206ENST00000474828 FOXN2P32314 431 aa16.74■□□□□ 0.27
SCAF11-206ENST00000474828 SESN2P58004 480 aaPredicted RBP16.74■□□□□ 0.27
SCAF11-206ENST00000474828 TMEM115Q12893 351 aaPredicted RBP16.74■□□□□ 0.27
SCAF11-206ENST00000474828 C6orf132Q5T0Z8 1188 aa16.74■□□□□ 0.27
SCAF11-206ENST00000474828 C11orf96Q7Z7L8 435 aa16.74■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms