RNA–Protein interactions for RNA: ENST00000474665.1

LIMD1-204, Transcript of LIM domains containing 1, humanhuman

TSL 3

Gene LIMD1, Length 513 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD1-204ENST00000474665 TRABDQ9H4I3 376 aa6.95□□□□□ -1.3
LIMD1-204ENST00000474665 SUDS3Q9H7L9 328 aaPredicted RBP6.95□□□□□ -1.3
LIMD1-204ENST00000474665 AASDHPPTQ9NRN7 309 aa6.95□□□□□ -1.3
LIMD1-204ENST00000474665 SYBUQ9NX95 663 aa6.95□□□□□ -1.3
LIMD1-204ENST00000474665 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP6.95□□□□□ -1.3
LIMD1-204ENST00000474665 HACD3Q9P035 362 aa6.95□□□□□ -1.3
LIMD1-204ENST00000474665 NFKBIL1Q9UBC1 381 aaPredicted RBP6.95□□□□□ -1.3
LIMD1-204ENST00000474665 ASIC3Q9UHC3 531 aa6.95□□□□□ -1.3
LIMD1-204ENST00000474665 TPX2Q9ULW0 747 aaKnown RBP6.95□□□□□ -1.3
LIMD1-204ENST00000474665 ANKRD6Q9Y2G4 727 aa6.95□□□□□ -1.3
LIMD1-204ENST00000474665 FNDC3AQ9Y2H6 1198 aaKnown RBP6.95□□□□□ -1.3
LIMD1-204ENST00000474665 SNX24Q9Y343 169 aa6.95□□□□□ -1.3
LIMD1-204ENST00000474665 OR1A2Q9Y585 309 aa6.95□□□□□ -1.3
LIMD1-204ENST00000474665 PCYT1BQ9Y5K3 369 aaPredicted RBP6.95□□□□□ -1.3
LIMD1-204ENST00000474665 SNX11Q9Y5W9 270 aa6.95□□□□□ -1.3
LIMD1-204ENST00000474665 ESYT3A0FGR9 886 aa6.94□□□□□ -1.3
LIMD1-204ENST00000474665 RGSL1A5PLK6 1076 aa6.94□□□□□ -1.3
LIMD1-204ENST00000474665 GOLGA6CA6NDK9 693 aa6.94□□□□□ -1.3
LIMD1-204ENST00000474665 GOLGA6BA6NDN3 693 aa6.94□□□□□ -1.3
LIMD1-204ENST00000474665 FAM187AA6NFU0 413 aa6.94□□□□□ -1.3
LIMD1-204ENST00000474665 TMEM202A6NGA9 273 aa6.94□□□□□ -1.3
LIMD1-204ENST00000474665 ENO4A6NNW6 628 aa6.94□□□□□ -1.3
LIMD1-204ENST00000474665 EFCAB8A8MWE9 144 aa6.94□□□□□ -1.3
LIMD1-204ENST00000474665 SH3BP5O60239 455 aa6.94□□□□□ -1.3
LIMD1-204ENST00000474665 UGT1A9O60656 530 aa6.94□□□□□ -1.3
LIMD1-204ENST00000474665 PCCBP05166 539 aa6.94□□□□□ -1.3
LIMD1-204ENST00000474665 GOLGA6DP0CG33 693 aa6.94□□□□□ -1.3
LIMD1-204ENST00000474665 PRSS56P0CW18 603 aa6.94□□□□□ -1.3
LIMD1-204ENST00000474665 THEGLP0DJG4 465 aa6.94□□□□□ -1.3
LIMD1-204ENST00000474665 CD59P13987 128 aa6.94□□□□□ -1.3
LIMD1-204ENST00000474665 UGT1A6P19224 532 aa6.94□□□□□ -1.3
LIMD1-204ENST00000474665 LPOP22079 712 aaPredicted RBP6.94□□□□□ -1.3
LIMD1-204ENST00000474665 UGT1A1P22309 533 aa6.94□□□□□ -1.3
LIMD1-204ENST00000474665 UGT1A4P22310 534 aa6.94□□□□□ -1.3
LIMD1-204ENST00000474665 NMBRP28336 390 aa6.94□□□□□ -1.3
LIMD1-204ENST00000474665 TEAD1P28347 426 aa6.94□□□□□ -1.3
LIMD1-204ENST00000474665 UGT1A3P35503 534 aa6.94□□□□□ -1.3
LIMD1-204ENST00000474665 UGT1A5P35504 534 aa6.94□□□□□ -1.3
LIMD1-204ENST00000474665 CDKN1CP49918 316 aaPredicted RBP6.94□□□□□ -1.3
LIMD1-204ENST00000474665 AFF3P51826 1226 aaKnown RBP6.94□□□□□ -1.3
LIMD1-204ENST00000474665 DCDC1P59894 354 aa6.94□□□□□ -1.3
LIMD1-204ENST00000474665 CDK3Q00526 305 aa6.94□□□□□ -1.3
LIMD1-204ENST00000474665 GRIK2Q13002 908 aa6.94□□□□□ -1.3
LIMD1-204ENST00000474665 CBLBQ13191 982 aa6.94□□□□□ -1.3
LIMD1-204ENST00000474665 PDE1CQ14123 709 aaPredicted RBP6.94□□□□□ -1.3
LIMD1-204ENST00000474665 STAT4Q14765 748 aa6.94□□□□□ -1.3
LIMD1-204ENST00000474665 CHRNA6Q15825 494 aa6.94□□□□□ -1.3
LIMD1-204ENST00000474665 DUOXA1Q1HG43 343 aa6.94□□□□□ -1.3
LIMD1-204ENST00000474665 ATP13A5Q4VNC0 1218 aa6.94□□□□□ -1.3
LIMD1-204ENST00000474665 TAF1BQ53T94 588 aaPredicted RBP6.94□□□□□ -1.3
LIMD1-204ENST00000474665 ZNF648Q5T619 568 aaPredicted RBP6.94□□□□□ -1.3
LIMD1-204ENST00000474665 CES3Q6UWW8 571 aa6.94□□□□□ -1.3
LIMD1-204ENST00000474665 ADAMTSL4Q6UY14 1074 aa6.94□□□□□ -1.3
LIMD1-204ENST00000474665 PPP1R21Q6ZMI0 780 aa6.94□□□□□ -1.3
LIMD1-204ENST00000474665 GLT6D1Q7Z4J2 308 aa6.94□□□□□ -1.3
LIMD1-204ENST00000474665 TRIM74Q86UV6 250 aa6.94□□□□□ -1.3
LIMD1-204ENST00000474665 IQCHQ86VS3 1027 aa6.94□□□□□ -1.3
LIMD1-204ENST00000474665 HOOK3Q86VS8 718 aa6.94□□□□□ -1.3
LIMD1-204ENST00000474665 HEATR4Q86WZ0 1026 aa6.94□□□□□ -1.3
LIMD1-204ENST00000474665 PIANPQ8IYJ0 282 aa6.94□□□□□ -1.3
LIMD1-204ENST00000474665 LRRC45Q96CN5 670 aa6.94□□□□□ -1.3
LIMD1-204ENST00000474665 KLHDC7BQ96G42 594 aa6.94□□□□□ -1.3
LIMD1-204ENST00000474665 COX14Q96I36 57 aa6.94□□□□□ -1.3
LIMD1-204ENST00000474665 TBATAQ96M53 351 aa6.94□□□□□ -1.3
LIMD1-204ENST00000474665 RUNDC3BQ96NL0 473 aa6.94□□□□□ -1.3
LIMD1-204ENST00000474665 RANBP9Q96S59 729 aa6.94□□□□□ -1.3
LIMD1-204ENST00000474665 SRPK1Q96SB4 655 aaKnown RBP6.94□□□□□ -1.3
LIMD1-204ENST00000474665 APOOQ9BUR5 198 aa6.94□□□□□ -1.3
LIMD1-204ENST00000474665 KIFC1Q9BW19 673 aa6.94□□□□□ -1.3
LIMD1-204ENST00000474665 DPH5Q9H2P9 285 aa6.94□□□□□ -1.3
LIMD1-204ENST00000474665 TCEAL2Q9H3H9 227 aaPredicted RBP6.94□□□□□ -1.3
LIMD1-204ENST00000474665 FAM83DQ9H4H8 585 aa6.94□□□□□ -1.3
LIMD1-204ENST00000474665 UGT1A7Q9HAW7 530 aa6.94□□□□□ -1.3
LIMD1-204ENST00000474665 UGT1A10Q9HAW8 530 aa6.94□□□□□ -1.3
LIMD1-204ENST00000474665 UGT1A8Q9HAW9 530 aa6.94□□□□□ -1.3
LIMD1-204ENST00000474665 IL21RQ9HBE5 538 aa6.94□□□□□ -1.3
LIMD1-204ENST00000474665 FGF22Q9HCT0 170 aa6.94□□□□□ -1.3
LIMD1-204ENST00000474665 ARFGAP3Q9NP61 516 aa6.94□□□□□ -1.3
LIMD1-204ENST00000474665 CHRAC1Q9NRG0 131 aa6.94□□□□□ -1.3
LIMD1-204ENST00000474665 TREX1Q9NSU2 369 aa6.94□□□□□ -1.3
LIMD1-204ENST00000474665 NLE1Q9NVX2 485 aaPredicted RBP6.94□□□□□ -1.3
LIMD1-204ENST00000474665 GOLGA6AQ9NYA3 693 aa6.94□□□□□ -1.3
LIMD1-204ENST00000474665 ANKMY1Q9P2S6 941 aa6.94□□□□□ -1.3
LIMD1-204ENST00000474665 IL17BQ9UHF5 180 aa6.94□□□□□ -1.3
LIMD1-204ENST00000474665 FKBPLQ9UIM3 349 aa6.94□□□□□ -1.3
LIMD1-204ENST00000474665 SLC6A14Q9UN76 642 aa6.94□□□□□ -1.3
LIMD1-204ENST00000474665 TCAF1Q9Y4C2 921 aa6.94□□□□□ -1.3
LIMD1-204ENST00000474665 ST14Q9Y5Y6 855 aa6.94□□□□□ -1.3
LIMD1-204ENST00000474665 OAS3Q9Y6K5 1087 aaKnown RBP6.94□□□□□ -1.3
LIMD1-204ENST00000474665 COL5A1P20908 1838 aaPredicted RBP6.94□□□□□ -1.3
LIMD1-204ENST00000474665 COL12A1Q99715 3063 aa6.93□□□□□ -1.3
LIMD1-204ENST00000474665 TRBV5-4A0A0C4DH59 114 aa6.93□□□□□ -1.3
LIMD1-204ENST00000474665 SPTY2D1-AS1A0A0U1RR47 76 aa6.93□□□□□ -1.3
LIMD1-204ENST00000474665 TEX51A0A1B0GUA7 166 aa6.93□□□□□ -1.3
LIMD1-204ENST00000474665 CCDC162PA2VCL2 907 aa6.93□□□□□ -1.3
LIMD1-204ENST00000474665 CTAGE15A4D2H0 777 aa6.93□□□□□ -1.3
LIMD1-204ENST00000474665 OR51F1A6NGY5 319 aa6.93□□□□□ -1.3
LIMD1-204ENST00000474665 A6NNZ2 444 aa6.93□□□□□ -1.3
LIMD1-204ENST00000474665 AGAP14A8MT82 685 aa6.93□□□□□ -1.3
LIMD1-204ENST00000474665 E7ESA3 106 aa6.93□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms