RNA–Protein interactions for RNA: ENST00000474047.5

VAMP4-203, Transcript of vesicle associated membrane protein 4, humanhuman

TSL 1 (best)

Gene VAMP4, Length 1,738 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP4-203ENST00000474047 GPR156Q8NFN8 814 aa14.07□□□□□ -0.16
VAMP4-203ENST00000474047 OR4K2Q8NGD2 314 aa14.07□□□□□ -0.16
VAMP4-203ENST00000474047 WDR48Q8TAF3 677 aa14.07□□□□□ -0.16
VAMP4-203ENST00000474047 HOMER3Q9NSC5 361 aa14.07□□□□□ -0.16
VAMP4-203ENST00000474047 LRIT1Q9P2V4 623 aa14.07□□□□□ -0.16
VAMP4-203ENST00000474047 AK5Q9Y6K8 562 aa14.07□□□□□ -0.16
VAMP4-203ENST00000474047 KNTC1P50748 2209 aa14.07□□□□□ -0.16
VAMP4-203ENST00000474047 GPR89AB7ZAQ6 455 aa14.07□□□□□ -0.16
VAMP4-203ENST00000474047 VEGFDO43915 354 aa14.07□□□□□ -0.16
VAMP4-203ENST00000474047 NUAK1O60285 661 aa14.07□□□□□ -0.16
VAMP4-203ENST00000474047 NOBOXO60393 691 aa14.07□□□□□ -0.16
VAMP4-203ENST00000474047 DNAJC6O75061 913 aa14.07□□□□□ -0.16
VAMP4-203ENST00000474047 CDK14O94921 469 aa14.07□□□□□ -0.16
VAMP4-203ENST00000474047 GPR89BP0CG08 455 aa14.07□□□□□ -0.16
VAMP4-203ENST00000474047 ACP5P13686 325 aa14.07□□□□□ -0.16
VAMP4-203ENST00000474047 GLB1P16278 677 aa14.07□□□□□ -0.16
VAMP4-203ENST00000474047 ZNF8P17098 575 aaPredicted RBP14.07□□□□□ -0.16
VAMP4-203ENST00000474047 FDFT1P37268 417 aa14.07□□□□□ -0.16
VAMP4-203ENST00000474047 PPM1FP49593 454 aaPredicted RBP14.07□□□□□ -0.16
VAMP4-203ENST00000474047 SEPT6Q14141 434 aa14.07□□□□□ -0.16
VAMP4-203ENST00000474047 SPIDRQ14159 915 aa14.07□□□□□ -0.16
VAMP4-203ENST00000474047 CHRNA6Q15825 494 aa14.07□□□□□ -0.16
VAMP4-203ENST00000474047 ST3GAL2Q16842 350 aa14.07□□□□□ -0.16
VAMP4-203ENST00000474047 ATP13A5Q4VNC0 1218 aa14.07□□□□□ -0.16
VAMP4-203ENST00000474047 CRTC3Q6UUV7 619 aa14.07□□□□□ -0.16
VAMP4-203ENST00000474047 PPP1R21Q6ZMI0 780 aa14.07□□□□□ -0.16
VAMP4-203ENST00000474047 ADGRG6Q86SQ4 1221 aa14.07□□□□□ -0.16
VAMP4-203ENST00000474047 REXO1L1PQ8IX06 675 aa14.07□□□□□ -0.16
VAMP4-203ENST00000474047 DNAAF3Q8N9W5 541 aa14.07□□□□□ -0.16
VAMP4-203ENST00000474047 ZCCHC14Q8WYQ9 949 aaKnown RBP14.07□□□□□ -0.16
VAMP4-203ENST00000474047 RTP4Q96DX8 246 aa14.07□□□□□ -0.16
VAMP4-203ENST00000474047 PBKQ96KB5 322 aa14.07□□□□□ -0.16
VAMP4-203ENST00000474047 VPS35Q96QK1 796 aa14.07□□□□□ -0.16
VAMP4-203ENST00000474047 ZCCHC2Q9C0B9 1178 aaKnown RBP14.07□□□□□ -0.16
VAMP4-203ENST00000474047 KCNF1Q9H3M0 494 aa14.07□□□□□ -0.16
VAMP4-203ENST00000474047 CCDC86Q9H6F5 360 aaKnown RBP14.07□□□□□ -0.16
VAMP4-203ENST00000474047 ARNT2Q9HBZ2 717 aa14.07□□□□□ -0.16
VAMP4-203ENST00000474047 APPL1Q9UKG1 709 aa14.07□□□□□ -0.16
VAMP4-203ENST00000474047 PLXNB3Q9ULL4 1909 aa14.06□□□□□ -0.16
VAMP4-203ENST00000474047 TPRP12270 2363 aaKnown RBP14.06□□□□□ -0.16
VAMP4-203ENST00000474047 ERI2A8K979 691 aaKnown RBP14.06□□□□□ -0.16
VAMP4-203ENST00000474047 UGT1A9O60656 530 aa14.06□□□□□ -0.16
VAMP4-203ENST00000474047 SNX2O60749 519 aa14.06□□□□□ -0.16
VAMP4-203ENST00000474047 CSO75390 466 aaKnown RBP14.06□□□□□ -0.16
VAMP4-203ENST00000474047 MTX2O75431 263 aa14.06□□□□□ -0.16
VAMP4-203ENST00000474047 ECEL1O95672 775 aa14.06□□□□□ -0.16
VAMP4-203ENST00000474047 AP2A1O95782 977 aa14.06□□□□□ -0.16
VAMP4-203ENST00000474047 TPH1P17752 444 aa14.06□□□□□ -0.16
VAMP4-203ENST00000474047 UGT1A6P19224 532 aa14.06□□□□□ -0.16
VAMP4-203ENST00000474047 UGT1A1P22309 533 aa14.06□□□□□ -0.16
VAMP4-203ENST00000474047 UGT1A4P22310 534 aa14.06□□□□□ -0.16
VAMP4-203ENST00000474047 UGT1A3P35503 534 aa14.06□□□□□ -0.16
VAMP4-203ENST00000474047 UGT1A5P35504 534 aa14.06□□□□□ -0.16
VAMP4-203ENST00000474047 TMPRSS15P98073 1019 aa14.06□□□□□ -0.16
VAMP4-203ENST00000474047 PTPRCAPQ14761 206 aa14.06□□□□□ -0.16
VAMP4-203ENST00000474047 INSCQ1MX18 579 aa14.06□□□□□ -0.16
VAMP4-203ENST00000474047 LDLRAP1Q5SW96 308 aa14.06□□□□□ -0.16
VAMP4-203ENST00000474047 CERCAMQ5T4B2 595 aa14.06□□□□□ -0.16
VAMP4-203ENST00000474047 RBM44Q6ZP01 1051 aaKnown RBP14.06□□□□□ -0.16
VAMP4-203ENST00000474047 CACTIN-AS1Q8N1I8 211 aa14.06□□□□□ -0.16
VAMP4-203ENST00000474047 DCBLD1Q8N8Z6 715 aa14.06□□□□□ -0.16
VAMP4-203ENST00000474047 ZNF398Q8TD17 642 aa14.06□□□□□ -0.16
VAMP4-203ENST00000474047 GFM1Q96RP9 751 aaKnown RBP14.06□□□□□ -0.16
VAMP4-203ENST00000474047 OSGEPL1Q9H4B0 414 aa14.06□□□□□ -0.16
VAMP4-203ENST00000474047 UGT1A7Q9HAW7 530 aa14.06□□□□□ -0.16
VAMP4-203ENST00000474047 UGT1A10Q9HAW8 530 aa14.06□□□□□ -0.16
VAMP4-203ENST00000474047 UGT1A8Q9HAW9 530 aa14.06□□□□□ -0.16
VAMP4-203ENST00000474047 ETNK1Q9HBU6 452 aa14.06□□□□□ -0.16
VAMP4-203ENST00000474047 RAB6BQ9NRW1 208 aa14.06□□□□□ -0.16
VAMP4-203ENST00000474047 PAK5Q9P286 719 aa14.06□□□□□ -0.16
VAMP4-203ENST00000474047 KCNK6Q9Y257 313 aa14.06□□□□□ -0.16
VAMP4-203ENST00000474047 DRG1Q9Y295 367 aaKnown RBP14.06□□□□□ -0.16
VAMP4-203ENST00000474047 ASXL3Q9C0F0 2248 aa14.05□□□□□ -0.16
VAMP4-203ENST00000474047 ARHGEF17Q96PE2 2063 aaPredicted RBP14.05□□□□□ -0.16
VAMP4-203ENST00000474047 TRBV23OR9-2A0A075B6M9 112 aa14.05□□□□□ -0.16
VAMP4-203ENST00000474047 KMOO15229 486 aa14.05□□□□□ -0.16
VAMP4-203ENST00000474047 NUDT21O43809 227 aaKnown RBP14.05□□□□□ -0.16
VAMP4-203ENST00000474047 ETS1P14921 441 aa14.05□□□□□ -0.16
VAMP4-203ENST00000474047 AKT1P31749 480 aa14.05□□□□□ -0.16
VAMP4-203ENST00000474047 HADHAP40939 763 aa14.05□□□□□ -0.16
VAMP4-203ENST00000474047 MAZP56270 477 aaKnown RBP14.05□□□□□ -0.16
VAMP4-203ENST00000474047 TMEM115Q12893 351 aaPredicted RBP14.05□□□□□ -0.16
VAMP4-203ENST00000474047 HLTFQ14527 1009 aaKnown RBP eCLIP14.05□□□□□ -0.16
VAMP4-203ENST00000474047 KCTD11Q693B1 232 aa14.05□□□□□ -0.16
VAMP4-203ENST00000474047 DENND5AQ6IQ26 1287 aa14.05□□□□□ -0.16
VAMP4-203ENST00000474047 LRRTM4Q86VH4 590 aa14.05□□□□□ -0.16
VAMP4-203ENST00000474047 SFTPA2Q8IWL1 248 aa14.05□□□□□ -0.16
VAMP4-203ENST00000474047 SLC35F6Q8N357 371 aa14.05□□□□□ -0.16
VAMP4-203ENST00000474047 DTX3LQ8TDB6 740 aa14.05□□□□□ -0.16
VAMP4-203ENST00000474047 NXPE2Q96DL1 559 aa14.05□□□□□ -0.16
VAMP4-203ENST00000474047 NAP1L3Q99457 506 aaPredicted RBP14.05□□□□□ -0.16
VAMP4-203ENST00000474047 ASB8Q9H765 288 aa14.05□□□□□ -0.16
VAMP4-203ENST00000474047 KLC4Q9NSK0 619 aa14.05□□□□□ -0.16
VAMP4-203ENST00000474047 FKBPLQ9UIM3 349 aa14.05□□□□□ -0.16
VAMP4-203ENST00000474047 KCTD3Q9Y597 815 aa14.05□□□□□ -0.16
VAMP4-203ENST00000474047 RNF215Q9Y6U7 377 aa14.05□□□□□ -0.16
VAMP4-203ENST00000474047 ACACBO00763 2458 aa14.05□□□□□ -0.16
VAMP4-203ENST00000474047 MYLKQ15746 1914 aa14.05□□□□□ -0.16
VAMP4-203ENST00000474047 TCEA3O75764 348 aa14.04□□□□□ -0.16
VAMP4-203ENST00000474047 PRAMEF1O95521 474 aa14.04□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms