RNA–Protein interactions for RNA: ENST00000472441.1

TM4SF1-202, Transcript of transmembrane 4 L six family member 1, humanhuman

TSL 2 BASIC

Gene TM4SF1, Length 3,115 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM4SF1-202ENST00000472441 TRIM16O95361 564 aa4.83□□□□□ -1.64
TM4SF1-202ENST00000472441 WISP3O95389 354 aaPredicted RBP4.83□□□□□ -1.64
TM4SF1-202ENST00000472441 PRAMEF1O95521 474 aa4.83□□□□□ -1.64
TM4SF1-202ENST00000472441 MTHFD2P13995 350 aa4.83□□□□□ -1.64
TM4SF1-202ENST00000472441 HOXB8P17481 243 aaPredicted RBP4.83□□□□□ -1.64
TM4SF1-202ENST00000472441 GNAZP19086 355 aa4.83□□□□□ -1.64
TM4SF1-202ENST00000472441 TCN1P20061 433 aaPredicted RBP4.83□□□□□ -1.64
TM4SF1-202ENST00000472441 HLA-FP30511 346 aa4.83□□□□□ -1.64
TM4SF1-202ENST00000472441 HNF1BP35680 557 aa4.83□□□□□ -1.64
TM4SF1-202ENST00000472441 SLC26A3P40879 764 aa4.83□□□□□ -1.64
TM4SF1-202ENST00000472441 AGTR2P50052 363 aa4.83□□□□□ -1.64
TM4SF1-202ENST00000472441 HK2P52789 917 aa4.83□□□□□ -1.64
TM4SF1-202ENST00000472441 FOXA1P55317 472 aa4.83□□□□□ -1.64
TM4SF1-202ENST00000472441 PKNOX1P55347 436 aa4.83□□□□□ -1.64
TM4SF1-202ENST00000472441 IL2P60568 153 aa4.83□□□□□ -1.64
TM4SF1-202ENST00000472441 SLC7A9P82251 487 aa4.83□□□□□ -1.64
TM4SF1-202ENST00000472441 ECT2LQ008S8 904 aa4.83□□□□□ -1.64
TM4SF1-202ENST00000472441 MMEL1Q495T6 779 aa4.83□□□□□ -1.64
TM4SF1-202ENST00000472441 AGKQ53H12 422 aa4.83□□□□□ -1.64
TM4SF1-202ENST00000472441 CTSL3PQ5NE16 218 aa4.83□□□□□ -1.64
TM4SF1-202ENST00000472441 SWT1Q5T5J6 900 aaKnown RBP4.83□□□□□ -1.64
TM4SF1-202ENST00000472441 SCIMPQ6UWF3 145 aa4.83□□□□□ -1.64
TM4SF1-202ENST00000472441 GK5Q6ZS86 529 aa4.83□□□□□ -1.64
TM4SF1-202ENST00000472441 NET1Q7Z628 596 aaPredicted RBP4.83□□□□□ -1.64
TM4SF1-202ENST00000472441 TSPAN33Q86UF1 283 aa4.83□□□□□ -1.64
TM4SF1-202ENST00000472441 DCBLD1Q8N8Z6 715 aa4.83□□□□□ -1.64
TM4SF1-202ENST00000472441 FIBINQ8TAL6 211 aa4.83□□□□□ -1.64
TM4SF1-202ENST00000472441 PYDC1Q8WXC3 89 aa4.83□□□□□ -1.64
TM4SF1-202ENST00000472441 ING5Q8WYH8 240 aa4.83□□□□□ -1.64
TM4SF1-202ENST00000472441 ACDQ96AP0 544 aa4.83□□□□□ -1.64
TM4SF1-202ENST00000472441 ASIC4Q96FT7 647 aa4.83□□□□□ -1.64
TM4SF1-202ENST00000472441 C3orf30Q96M34 536 aa4.83□□□□□ -1.64
TM4SF1-202ENST00000472441 ATOH8Q96SQ7 321 aa4.83□□□□□ -1.64
TM4SF1-202ENST00000472441 CDRT15Q96T59 188 aa4.83□□□□□ -1.64
TM4SF1-202ENST00000472441 RTKNQ9BST9 563 aa4.83□□□□□ -1.64
TM4SF1-202ENST00000472441 CCDC28BQ9BUN5 200 aa4.83□□□□□ -1.64
TM4SF1-202ENST00000472441 BOCQ9BWV1 1114 aa4.83□□□□□ -1.64
TM4SF1-202ENST00000472441 APOL5Q9BWW9 433 aa4.83□□□□□ -1.64
TM4SF1-202ENST00000472441 BBS2Q9BXC9 721 aa4.83□□□□□ -1.64
TM4SF1-202ENST00000472441 ZDHHC6Q9H6R6 413 aa4.83□□□□□ -1.64
TM4SF1-202ENST00000472441 MAGEE1Q9HCI5 957 aa4.83□□□□□ -1.64
TM4SF1-202ENST00000472441 CD274Q9NZQ7 290 aa4.83□□□□□ -1.64
TM4SF1-202ENST00000472441 HACD3Q9P035 362 aa4.83□□□□□ -1.64
TM4SF1-202ENST00000472441 STOML1Q9UBI4 398 aa4.83□□□□□ -1.64
TM4SF1-202ENST00000472441 GIMAP2Q9UG22 337 aa4.83□□□□□ -1.64
TM4SF1-202ENST00000472441 SLCO3A1Q9UIG8 710 aa4.83□□□□□ -1.64
TM4SF1-202ENST00000472441 CDH22Q9UJ99 828 aa4.83□□□□□ -1.64
TM4SF1-202ENST00000472441 RPL26L1Q9UNX3 145 aaKnown RBP4.83□□□□□ -1.64
TM4SF1-202ENST00000472441 BTRCQ9Y297 605 aa4.83□□□□□ -1.64
TM4SF1-202ENST00000472441 ZNF510Q9Y2H8 683 aa4.83□□□□□ -1.64
TM4SF1-202ENST00000472441 MED16Q9Y2X0 877 aa4.83□□□□□ -1.64
TM4SF1-202ENST00000472441 TIMM22Q9Y584 194 aa4.83□□□□□ -1.64
TM4SF1-202ENST00000472441 ALPK3Q96L96 1907 aa4.83□□□□□ -1.64
TM4SF1-202ENST00000472441 STX16-NPEPL1H3BU86 382 aa4.83□□□□□ -1.64
TM4SF1-202ENST00000472441 FZD6O60353 706 aa4.83□□□□□ -1.64
TM4SF1-202ENST00000472441 SNX2O60749 519 aa4.83□□□□□ -1.64
TM4SF1-202ENST00000472441 CDK14O94921 469 aa4.83□□□□□ -1.64
TM4SF1-202ENST00000472441 IGSF6O95976 241 aa4.83□□□□□ -1.64
TM4SF1-202ENST00000472441 LINC00032P0C843 101 aa4.83□□□□□ -1.64
TM4SF1-202ENST00000472441 CA5AP35218 305 aa4.83□□□□□ -1.64
TM4SF1-202ENST00000472441 HMGCLP35914 325 aa4.83□□□□□ -1.64
TM4SF1-202ENST00000472441 AP1S1P61966 158 aa4.83□□□□□ -1.64
TM4SF1-202ENST00000472441 XIAPP98170 497 aa4.83□□□□□ -1.64
TM4SF1-202ENST00000472441 CACNG1Q06432 222 aa4.83□□□□□ -1.64
TM4SF1-202ENST00000472441 SLC34A1Q06495 639 aa4.83□□□□□ -1.64
TM4SF1-202ENST00000472441 MUM1Q2TAK8 710 aa4.83□□□□□ -1.64
TM4SF1-202ENST00000472441 TRMT5Q32P41 509 aaKnown RBP4.83□□□□□ -1.64
TM4SF1-202ENST00000472441 PITRM1Q5JRX3 1037 aa4.83□□□□□ -1.64
TM4SF1-202ENST00000472441 LAYNQ6UX15 382 aa4.83□□□□□ -1.64
TM4SF1-202ENST00000472441 SERPINA9Q86WD7 417 aa4.83□□□□□ -1.64
TM4SF1-202ENST00000472441 DSELQ8IZU8 1212 aa4.83□□□□□ -1.64
TM4SF1-202ENST00000472441 CLYBLQ8N0X4 340 aa4.83□□□□□ -1.64
TM4SF1-202ENST00000472441 NKAPQ8N5F7 415 aaKnown RBP4.83□□□□□ -1.64
TM4SF1-202ENST00000472441 ENDOVQ8N8Q3 282 aaKnown RBP4.83□□□□□ -1.64
TM4SF1-202ENST00000472441 MRPL43Q8N983 215 aaKnown RBP4.83□□□□□ -1.64
TM4SF1-202ENST00000472441 KYQ8NBH2 561 aa4.83□□□□□ -1.64
TM4SF1-202ENST00000472441 OR2AP1Q8NGE2 309 aa4.83□□□□□ -1.64
TM4SF1-202ENST00000472441 GIMAP7Q8NHV1 300 aa4.83□□□□□ -1.64
TM4SF1-202ENST00000472441 RP9Q8TA86 221 aaKnown RBP4.83□□□□□ -1.64
TM4SF1-202ENST00000472441 RIN3Q8TB24 985 aa4.83□□□□□ -1.64
TM4SF1-202ENST00000472441 TBRG4Q969Z0 631 aaKnown RBP eCLIP4.83□□□□□ -1.64
TM4SF1-202ENST00000472441 KIAA1191Q96A73 305 aa4.83□□□□□ -1.64
TM4SF1-202ENST00000472441 RSRC1Q96IZ7 334 aaKnown RBP4.83□□□□□ -1.64
TM4SF1-202ENST00000472441 C17orf80Q9BSJ5 609 aa4.83□□□□□ -1.64
TM4SF1-202ENST00000472441 CIPCQ9C0C6 399 aa4.83□□□□□ -1.64
TM4SF1-202ENST00000472441 DERL2Q9GZP9 239 aa4.83□□□□□ -1.64
TM4SF1-202ENST00000472441 CLPBQ9H078 707 aa4.83□□□□□ -1.64
TM4SF1-202ENST00000472441 TFB2MQ9H5Q4 396 aaKnown RBP4.83□□□□□ -1.64
TM4SF1-202ENST00000472441 ATP13A3Q9H7F0 1226 aa4.83□□□□□ -1.64
TM4SF1-202ENST00000472441 DNMT3BQ9UBC3 853 aaKnown RBP4.83□□□□□ -1.64
TM4SF1-202ENST00000472441 CRLS1Q9UJA2 301 aa4.83□□□□□ -1.64
TM4SF1-202ENST00000472441 VPS9D1Q9Y2B5 631 aa4.83□□□□□ -1.64
TM4SF1-202ENST00000472441 HCFC2Q9Y5Z7 792 aa4.83□□□□□ -1.64
TM4SF1-202ENST00000472441 A0A0J9YYE9 177 aa4.82□□□□□ -1.64
TM4SF1-202ENST00000472441 A0A1B0GTL3 188 aa4.82□□□□□ -1.64
TM4SF1-202ENST00000472441 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP4.82□□□□□ -1.64
TM4SF1-202ENST00000472441 CARNS1A5YM72 827 aa4.82□□□□□ -1.64
TM4SF1-202ENST00000472441 GFRA2O00451 464 aa4.82□□□□□ -1.64
TM4SF1-202ENST00000472441 PRMT5O14744 637 aaPredicted RBP4.82□□□□□ -1.64
TM4SF1-202ENST00000472441 KERAO60938 352 aa4.82□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms