RNA–Protein interactions for RNA: ENST00000471987.1

CD46-213, Transcript of CD46 molecule, humanhuman

TSL 3

Gene CD46, Length 572 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-213ENST00000471987 PDE9AO76083 593 aa4.34□□□□□ -1.71
CD46-213ENST00000471987 BAG4O95429 457 aaKnown RBP4.34□□□□□ -1.71
CD46-213ENST00000471987 HNRNPA1P09651 372 aaKnown RBP eCLIP4.34□□□□□ -1.71
CD46-213ENST00000471987 GNB3P16520 340 aa4.34□□□□□ -1.71
CD46-213ENST00000471987 APOBEC1P41238 236 aaKnown RBP4.34□□□□□ -1.71
CD46-213ENST00000471987 NR2C2P49116 596 aa4.34□□□□□ -1.71
CD46-213ENST00000471987 KRTAP10-3P60369 221 aa4.34□□□□□ -1.71
CD46-213ENST00000471987 NEXNQ0ZGT2 675 aa4.34□□□□□ -1.71
CD46-213ENST00000471987 TRPC3Q13507 836 aa4.34□□□□□ -1.71
CD46-213ENST00000471987 BAK1Q16611 211 aa4.34□□□□□ -1.71
CD46-213ENST00000471987 RBMS3Q6XE24 437 aaKnown RBP4.34□□□□□ -1.71
CD46-213ENST00000471987 CCDC13Q8IYE1 715 aa4.34□□□□□ -1.71
CD46-213ENST00000471987 ADSSL1Q8N142 457 aa4.34□□□□□ -1.71
CD46-213ENST00000471987 WDR20Q8TBZ3 569 aa4.34□□□□□ -1.71
CD46-213ENST00000471987 FCAMRQ8WWV6 532 aa4.34□□□□□ -1.71
CD46-213ENST00000471987 PHF21AQ96BD5 680 aa4.34□□□□□ -1.71
CD46-213ENST00000471987 GCC1Q96CN9 775 aa4.34□□□□□ -1.71
CD46-213ENST00000471987 ABHD8Q96I13 439 aa4.34□□□□□ -1.71
CD46-213ENST00000471987 BICC1Q9H694 974 aaKnown RBP4.34□□□□□ -1.71
CD46-213ENST00000471987 NOL12Q9UGY1 213 aaKnown RBP eCLIP4.34□□□□□ -1.71
CD46-213ENST00000471987 SARDHQ9UL12 918 aa4.34□□□□□ -1.71
CD46-213ENST00000471987 PRSS21Q9Y6M0 314 aa4.34□□□□□ -1.71
CD46-213ENST00000471987 FAM90A26D6RGX4 464 aa4.33□□□□□ -1.72
CD46-213ENST00000471987 SNAP23O00161 211 aa4.33□□□□□ -1.72
CD46-213ENST00000471987 ANKRD28O15084 1053 aa4.33□□□□□ -1.72
CD46-213ENST00000471987 ZNF182P17025 639 aaPredicted RBP4.33□□□□□ -1.72
CD46-213ENST00000471987 UGT1A1P22309 533 aa4.33□□□□□ -1.72
CD46-213ENST00000471987 UBA1P22314 1058 aaKnown RBP4.33□□□□□ -1.72
CD46-213ENST00000471987 PAFAH1B1P43034 410 aa4.33□□□□□ -1.72
CD46-213ENST00000471987 LUMP51884 338 aaPredicted RBP4.33□□□□□ -1.72
CD46-213ENST00000471987 PRICKLE4Q2TBC4 344 aa4.33□□□□□ -1.72
CD46-213ENST00000471987 FAM53AQ6NSI3 398 aaPredicted RBP4.33□□□□□ -1.72
CD46-213ENST00000471987 SLC44A1Q8WWI5 657 aa4.33□□□□□ -1.72
CD46-213ENST00000471987 SAAL1Q96ER3 474 aa4.33□□□□□ -1.72
CD46-213ENST00000471987 PPP1R13BQ96KQ4 1090 aa4.33□□□□□ -1.72
CD46-213ENST00000471987 UBXN10Q96LJ8 280 aa4.33□□□□□ -1.72
CD46-213ENST00000471987 KIF9Q9HAQ2 790 aa4.33□□□□□ -1.72
CD46-213ENST00000471987 JRKLQ9Y4A0 524 aa4.33□□□□□ -1.72
CD46-213ENST00000471987 CCDC196A0A1B0GTZ2 297 aa4.32□□□□□ -1.72
CD46-213ENST00000471987 A0A1W2PPI3 338 aa4.32□□□□□ -1.72
CD46-213ENST00000471987 SERINC4A6NH21 518 aa4.32□□□□□ -1.72
CD46-213ENST00000471987 ANKRD66B4E2M5 251 aa4.32□□□□□ -1.72
CD46-213ENST00000471987 M0QZ24 198 aa4.32□□□□□ -1.72
CD46-213ENST00000471987 HMGB1P09429 215 aaKnown RBP4.32□□□□□ -1.72
CD46-213ENST00000471987 NR2F2P24468 414 aa4.32□□□□□ -1.72
CD46-213ENST00000471987 CNTFP26441 200 aa4.32□□□□□ -1.72
CD46-213ENST00000471987 CTCFP49711 727 aaPredicted RBP4.32□□□□□ -1.72
CD46-213ENST00000471987 IRX1P78414 480 aaPredicted RBP4.32□□□□□ -1.72
CD46-213ENST00000471987 KIR2DS3Q14952 304 aa4.32□□□□□ -1.72
CD46-213ENST00000471987 ZC2HC1CQ53FD0 456 aaPredicted RBP4.32□□□□□ -1.72
CD46-213ENST00000471987 PAPD4Q6PIY7 484 aaKnown RBP4.32□□□□□ -1.72
CD46-213ENST00000471987 CYP26C1Q6V0L0 522 aa4.32□□□□□ -1.72
CD46-213ENST00000471987 STXBP4Q6ZWJ1 553 aa4.32□□□□□ -1.72
CD46-213ENST00000471987 GSTA5Q7RTV2 222 aa4.32□□□□□ -1.72
CD46-213ENST00000471987 PIWIL4Q7Z3Z4 852 aaKnown RBP4.32□□□□□ -1.72
CD46-213ENST00000471987 ANKRD42Q8N9B4 389 aa4.32□□□□□ -1.72
CD46-213ENST00000471987 RDM1Q8NG50 284 aa4.32□□□□□ -1.72
CD46-213ENST00000471987 GTF3C6Q969F1 213 aa4.32□□□□□ -1.72
CD46-213ENST00000471987 IGSF8Q969P0 613 aa4.32□□□□□ -1.72
CD46-213ENST00000471987 RRNAD1Q96FB5 475 aaKnown RBP4.32□□□□□ -1.72
CD46-213ENST00000471987 TMEM68Q96MH6 324 aa4.32□□□□□ -1.72
CD46-213ENST00000471987 NEUROD6Q96NK8 337 aa4.32□□□□□ -1.72
CD46-213ENST00000471987 RANBP17Q9H2T7 1088 aaKnown RBP4.32□□□□□ -1.72
CD46-213ENST00000471987 SLC28A3Q9HAS3 691 aa4.32□□□□□ -1.72
CD46-213ENST00000471987 C2orf42Q9NWW7 574 aa4.32□□□□□ -1.72
CD46-213ENST00000471987 ADPRHL2Q9NX46 363 aa4.32□□□□□ -1.72
CD46-213ENST00000471987 ACAD8Q9UKU7 415 aa4.32□□□□□ -1.72
CD46-213ENST00000471987 RNF215Q9Y6U7 377 aa4.32□□□□□ -1.72
CD46-213ENST00000471987 FAM237AA0A1B0GTK4 181 aa4.31□□□□□ -1.72
CD46-213ENST00000471987 CLIC2O15247 247 aa4.31□□□□□ -1.72
CD46-213ENST00000471987 TNFSF14O43557 240 aa4.31□□□□□ -1.72
CD46-213ENST00000471987 BUD23O43709 281 aaKnown RBP4.31□□□□□ -1.72
CD46-213ENST00000471987 HOXA13P31271 388 aaPredicted RBP4.31□□□□□ -1.72
CD46-213ENST00000471987 PIP4K2AP48426 406 aaPredicted RBP4.31□□□□□ -1.72
CD46-213ENST00000471987 EIF3BP55884 814 aaKnown RBP4.31□□□□□ -1.72
CD46-213ENST00000471987 PTP4A2Q12974 167 aa4.31□□□□□ -1.72
CD46-213ENST00000471987 OLIG2Q13516 323 aa4.31□□□□□ -1.72
CD46-213ENST00000471987 DCTN2Q13561 401 aaKnown RBP4.31□□□□□ -1.72
CD46-213ENST00000471987 ITGA9Q13797 1035 aa4.31□□□□□ -1.72
CD46-213ENST00000471987 KRTCAP3Q53RY4 240 aa4.31□□□□□ -1.72
CD46-213ENST00000471987 HVCN1Q96D96 273 aa4.31□□□□□ -1.72
CD46-213ENST00000471987 SIL1Q9H173 461 aa4.31□□□□□ -1.72
CD46-213ENST00000471987 PPCSQ9HAB8 311 aa4.31□□□□□ -1.72
CD46-213ENST00000471987 ZBTB20Q9HC78 741 aaPredicted RBP4.31□□□□□ -1.72
CD46-213ENST00000471987 A0A1W2PP11 408 aa4.3□□□□□ -1.72
CD46-213ENST00000471987 NR3C1P04150 777 aa4.3□□□□□ -1.72
CD46-213ENST00000471987 POLBP06746 335 aa4.3□□□□□ -1.72
CD46-213ENST00000471987 MCCP23508 829 aa4.3□□□□□ -1.72
CD46-213ENST00000471987 ELF1P32519 619 aa4.3□□□□□ -1.72
CD46-213ENST00000471987 CXorf66Q5JRM2 361 aaPredicted RBP4.3□□□□□ -1.72
CD46-213ENST00000471987 FAM69AQ5T7M9 428 aa4.3□□□□□ -1.72
CD46-213ENST00000471987 KRTAP5-2Q701N4 177 aa4.3□□□□□ -1.72
CD46-213ENST00000471987 GTSCR1Q86UQ5 136 aa4.3□□□□□ -1.72
CD46-213ENST00000471987 LYG1Q8N1E2 194 aa4.3□□□□□ -1.72
CD46-213ENST00000471987 RBM15BQ8NDT2 890 aaKnown RBP4.3□□□□□ -1.72
CD46-213ENST00000471987 OR14L1PQ8NHC6 308 aa4.3□□□□□ -1.72
CD46-213ENST00000471987 NFKBIDQ8NI38 313 aa4.3□□□□□ -1.72
CD46-213ENST00000471987 PSPC1Q8WXF1 523 aaKnown RBP4.3□□□□□ -1.72
CD46-213ENST00000471987 RNF125Q96EQ8 232 aa4.3□□□□□ -1.72
CD46-213ENST00000471987 ART5Q96L15 291 aa4.3□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms