RNA–Protein interactions for RNA: ENST00000471246.1

UBXN4-207, Transcript of UBX domain protein 4, humanhuman

TSL 3

Gene UBXN4, Length 395 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN4-207ENST00000471246 TUBBP07437 444 aa1.36□□□□□ -2.19
UBXN4-207ENST00000471246 ZNF182P17025 639 aaPredicted RBP1.36□□□□□ -2.19
UBXN4-207ENST00000471246 UBA1P22314 1058 aaKnown RBP1.36□□□□□ -2.19
UBXN4-207ENST00000471246 EPHA8P29322 1005 aaPredicted RBP1.36□□□□□ -2.19
UBXN4-207ENST00000471246 APOBEC1P41238 236 aaKnown RBP1.36□□□□□ -2.19
UBXN4-207ENST00000471246 HSD17B4P51659 736 aa1.36□□□□□ -2.19
UBXN4-207ENST00000471246 RARSP54136 660 aaKnown RBP1.36□□□□□ -2.19
UBXN4-207ENST00000471246 TUBB4BP68371 445 aa1.36□□□□□ -2.19
UBXN4-207ENST00000471246 COG7P83436 770 aa1.36□□□□□ -2.19
UBXN4-207ENST00000471246 PMP22Q01453 160 aa1.36□□□□□ -2.19
UBXN4-207ENST00000471246 PPIGQ13427 754 aaKnown RBP eCLIP1.36□□□□□ -2.191e-12■■□□□ 12
UBXN4-207ENST00000471246 DCTN2Q13561 401 aaKnown RBP1.36□□□□□ -2.19
UBXN4-207ENST00000471246 DHX8Q14562 1220 aaKnown RBP1.36□□□□□ -2.19
UBXN4-207ENST00000471246 MYLK3Q32MK0 819 aa1.36□□□□□ -2.19
UBXN4-207ENST00000471246 CDONQ4KMG0 1287 aa1.36□□□□□ -2.19
UBXN4-207ENST00000471246 KRTCAP3Q53RY4 240 aa1.36□□□□□ -2.19
UBXN4-207ENST00000471246 WDR38Q5JTN6 314 aa1.36□□□□□ -2.19
UBXN4-207ENST00000471246 SFMBT2Q5VUG0 894 aa1.36□□□□□ -2.19
UBXN4-207ENST00000471246 C18orf63Q68DL7 685 aa1.36□□□□□ -2.19
UBXN4-207ENST00000471246 SLC35E4Q6ICL7 350 aa1.36□□□□□ -2.19
UBXN4-207ENST00000471246 CDC73Q6P1J9 531 aa1.36□□□□□ -2.19
UBXN4-207ENST00000471246 PAPD4Q6PIY7 484 aaKnown RBP1.36□□□□□ -2.19
UBXN4-207ENST00000471246 TSSK4Q6SA08 328 aa1.36□□□□□ -2.19
UBXN4-207ENST00000471246 ATG9AQ7Z3C6 839 aa1.36□□□□□ -2.19
UBXN4-207ENST00000471246 KRTAP7-1Q8IUC3 87 aa1.36□□□□□ -2.19
UBXN4-207ENST00000471246 APLFQ8IW19 511 aaPredicted RBP1.36□□□□□ -2.19
UBXN4-207ENST00000471246 MAP7D3Q8IWC1 876 aa1.36□□□□□ -2.19
UBXN4-207ENST00000471246 CPXCR1Q8N123 301 aa1.36□□□□□ -2.19
UBXN4-207ENST00000471246 CNTROBQ8N137 903 aa1.36□□□□□ -2.19
UBXN4-207ENST00000471246 ADSSL1Q8N142 457 aa1.36□□□□□ -2.19
UBXN4-207ENST00000471246 ESX1Q8N693 406 aa1.36□□□□□ -2.19
UBXN4-207ENST00000471246 STPG4Q8N801 248 aa1.36□□□□□ -2.19
UBXN4-207ENST00000471246 ZNF485Q8NCK3 441 aa1.36□□□□□ -2.19
UBXN4-207ENST00000471246 ZNF248Q8NDW4 579 aa1.36□□□□□ -2.19
UBXN4-207ENST00000471246 MYRIPQ8NFW9 859 aa1.36□□□□□ -2.19
UBXN4-207ENST00000471246 OR14L1PQ8NHC6 308 aa1.36□□□□□ -2.19
UBXN4-207ENST00000471246 SNED1Q8TER0 1413 aa1.36□□□□□ -2.19
UBXN4-207ENST00000471246 PSPC1Q8WXF1 523 aaKnown RBP1.36□□□□□ -2.19
UBXN4-207ENST00000471246 LGALS12Q96DT0 336 aa1.36□□□□□ -2.19
UBXN4-207ENST00000471246 STAMBPL1Q96FJ0 436 aa1.36□□□□□ -2.19
UBXN4-207ENST00000471246 SCRN2Q96FV2 425 aa1.36□□□□□ -2.19
UBXN4-207ENST00000471246 HARBI1Q96MB7 349 aa1.36□□□□□ -2.19
UBXN4-207ENST00000471246 PIP5K1AQ99755 562 aa1.36□□□□□ -2.19
UBXN4-207ENST00000471246 USP44Q9H0E7 712 aa1.36□□□□□ -2.19
UBXN4-207ENST00000471246 PRKRIP1Q9H875 184 aaPredicted RBP1.36□□□□□ -2.19
UBXN4-207ENST00000471246 SCPEP1Q9HB40 452 aa1.36□□□□□ -2.19
UBXN4-207ENST00000471246 LTB4R2Q9NPC1 389 aa1.36□□□□□ -2.19
UBXN4-207ENST00000471246 SLC52A3Q9NQ40 469 aa1.36□□□□□ -2.19
UBXN4-207ENST00000471246 WASH6PQ9NQA3 447 aa1.36□□□□□ -2.19
UBXN4-207ENST00000471246 PCDHB16Q9NRJ7 776 aa1.36□□□□□ -2.19
UBXN4-207ENST00000471246 STK39Q9UEW8 545 aa1.36□□□□□ -2.19
UBXN4-207ENST00000471246 HAO1Q9UJM8 370 aa1.36□□□□□ -2.19
UBXN4-207ENST00000471246 KCNK7Q9Y2U2 307 aa1.36□□□□□ -2.19
UBXN4-207ENST00000471246 MMP24Q9Y5R2 645 aa1.36□□□□□ -2.19
UBXN4-207ENST00000471246 LRRFIP2Q9Y608 721 aaKnown RBP1.36□□□□□ -2.19
UBXN4-207ENST00000471246 CYP46A1Q9Y6A2 500 aa1.36□□□□□ -2.19
UBXN4-207ENST00000471246 MAU2Q9Y6X3 613 aa1.36□□□□□ -2.19
UBXN4-207ENST00000471246 KDM3AQ9Y4C1 1321 aa1.36□□□□□ -2.19
UBXN4-207ENST00000471246 IGKV3D-15A0A087WSY6 115 aa1.35□□□□□ -2.19
UBXN4-207ENST00000471246 FAM237AA0A1B0GTK4 181 aa1.35□□□□□ -2.19
UBXN4-207ENST00000471246 C1orf226A1L170 272 aa1.35□□□□□ -2.19
UBXN4-207ENST00000471246 NPIPB15A6NHN6 443 aaPredicted RBP1.35□□□□□ -2.19
UBXN4-207ENST00000471246 EIF4E1BA6NMX2 242 aaKnown RBP1.35□□□□□ -2.19
UBXN4-207ENST00000471246 SMIM1B2RUZ4 78 aa1.35□□□□□ -2.19
UBXN4-207ENST00000471246 EIF3CLB5ME19 914 aaKnown RBP1.35□□□□□ -2.19
UBXN4-207ENST00000471246 ATP2A1O14983 1001 aa1.35□□□□□ -2.19
UBXN4-207ENST00000471246 KCNN4O15554 427 aa1.35□□□□□ -2.19
UBXN4-207ENST00000471246 PCDH7O60245 1069 aa1.35□□□□□ -2.19
UBXN4-207ENST00000471246 ZNF500O60304 480 aaPredicted RBP1.35□□□□□ -2.19
UBXN4-207ENST00000471246 CIDEAO60543 219 aa1.35□□□□□ -2.19
UBXN4-207ENST00000471246 PAGE4O60829 102 aa1.35□□□□□ -2.19
UBXN4-207ENST00000471246 SEC14L2O76054 403 aa1.35□□□□□ -2.19
UBXN4-207ENST00000471246 PDE9AO76083 593 aa1.35□□□□□ -2.19
UBXN4-207ENST00000471246 KCNK5O95279 499 aa1.35□□□□□ -2.19
UBXN4-207ENST00000471246 BAG4O95429 457 aaKnown RBP1.35□□□□□ -2.19
UBXN4-207ENST00000471246 MLYCDO95822 493 aa1.35□□□□□ -2.19
UBXN4-207ENST00000471246 CSF2RAP15509 400 aa1.35□□□□□ -2.19
UBXN4-207ENST00000471246 ZNF23P17027 643 aa1.35□□□□□ -2.19
UBXN4-207ENST00000471246 XBP1P17861 261 aa1.35□□□□□ -2.19
UBXN4-207ENST00000471246 UGT1A1P22309 533 aa1.35□□□□□ -2.19
UBXN4-207ENST00000471246 MCCP23508 829 aa1.35□□□□□ -2.19
UBXN4-207ENST00000471246 NR2F2P24468 414 aa1.35□□□□□ -2.19
UBXN4-207ENST00000471246 ELF1P32519 619 aa1.35□□□□□ -2.19
UBXN4-207ENST00000471246 ICAM3P32942 547 aa1.35□□□□□ -2.19
UBXN4-207ENST00000471246 PPM1FP49593 454 aaPredicted RBP1.35□□□□□ -2.19
UBXN4-207ENST00000471246 TAF6P49848 677 aa1.35□□□□□ -2.19
UBXN4-207ENST00000471246 TUBP50607 506 aa1.35□□□□□ -2.19
UBXN4-207ENST00000471246 OLR1P78380 273 aa1.35□□□□□ -2.19
UBXN4-207ENST00000471246 CEBPZQ03701 1054 aaKnown RBP1.35□□□□□ -2.19
UBXN4-207ENST00000471246 GRIK2Q13002 908 aa1.35□□□□□ -2.19
UBXN4-207ENST00000471246 TBX2Q13207 712 aaPredicted RBP1.35□□□□□ -2.19
UBXN4-207ENST00000471246 OLIG2Q13516 323 aa1.35□□□□□ -2.19
UBXN4-207ENST00000471246 ACVR2BQ13705 512 aa1.35□□□□□ -2.19
UBXN4-207ENST00000471246 PDE1CQ14123 709 aaPredicted RBP1.35□□□□□ -2.19
UBXN4-207ENST00000471246 FRG1Q14331 258 aaKnown RBP1.35□□□□□ -2.19
UBXN4-207ENST00000471246 TECRLQ5HYJ1 363 aa1.35□□□□□ -2.19
UBXN4-207ENST00000471246 SLC27A1Q6PCB7 646 aa1.35□□□□□ -2.19
UBXN4-207ENST00000471246 INO80CQ6PI98 192 aaPredicted RBP1.35□□□□□ -2.19
UBXN4-207ENST00000471246 ATF7IPQ6VMQ6 1270 aa1.35□□□□□ -2.19
UBXN4-207ENST00000471246 RBMS3Q6XE24 437 aaKnown RBP1.35□□□□□ -2.19
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms