RNA–Protein interactions for RNA: ENST00000470240.5

SMC4-212, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 3

Gene SMC4, Length 724 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-212ENST00000470240 THOP1P52888 689 aa7.96□□□□□ -1.14
SMC4-212ENST00000470240 PLK1P53350 603 aa7.96□□□□□ -1.14
SMC4-212ENST00000470240 CDKN2DP55273 166 aa7.96□□□□□ -1.14
SMC4-212ENST00000470240 PKNOX1P55347 436 aa7.96□□□□□ -1.14
SMC4-212ENST00000470240 MRPS22P82650 360 aaKnown RBP7.96□□□□□ -1.14
SMC4-212ENST00000470240 NOGQ13253 232 aa7.96□□□□□ -1.14
SMC4-212ENST00000470240 MAP7Q14244 749 aa7.96□□□□□ -1.14
SMC4-212ENST00000470240 GALNT3Q14435 633 aa7.96□□□□□ -1.14
SMC4-212ENST00000470240 INPP5AQ14642 412 aa7.96□□□□□ -1.14
SMC4-212ENST00000470240 ZNF423Q2M1K9 1284 aa7.96□□□□□ -1.14
SMC4-212ENST00000470240 TYSND1Q2T9J0 566 aa7.96□□□□□ -1.14
SMC4-212ENST00000470240 C5orf22Q49AR2 442 aa7.96□□□□□ -1.14
SMC4-212ENST00000470240 PABPC1LQ4VXU2 614 aaKnown RBP7.96□□□□□ -1.14
SMC4-212ENST00000470240 TMEM198Q66K66 360 aa7.96□□□□□ -1.14
SMC4-212ENST00000470240 ANKS6Q68DC2 871 aa7.96□□□□□ -1.14
SMC4-212ENST00000470240 GK5Q6ZS86 529 aa7.96□□□□□ -1.14
SMC4-212ENST00000470240 SPATA19Q7Z5L4 167 aa7.96□□□□□ -1.14
SMC4-212ENST00000470240 CIR1Q86X95 450 aaPredicted RBP7.96□□□□□ -1.14
SMC4-212ENST00000470240 DDIASQ8IXT1 998 aa7.96□□□□□ -1.14
SMC4-212ENST00000470240 KBTBD2Q8IY47 623 aa7.96□□□□□ -1.14
SMC4-212ENST00000470240 PAF1Q8N7H5 531 aa7.96□□□□□ -1.14
SMC4-212ENST00000470240 GPR152Q8TDT2 470 aa7.96□□□□□ -1.14
SMC4-212ENST00000470240 KIAA1191Q96A73 305 aa7.96□□□□□ -1.14
SMC4-212ENST00000470240 DCUN1D1Q96GG9 259 aa7.96□□□□□ -1.14
SMC4-212ENST00000470240 ZNF419Q96HQ0 510 aaPredicted RBP7.96□□□□□ -1.14
SMC4-212ENST00000470240 MARK4Q96L34 752 aa7.96□□□□□ -1.14
SMC4-212ENST00000470240 TBATAQ96M53 351 aa7.96□□□□□ -1.14
SMC4-212ENST00000470240 PSKH2Q96QS6 385 aa7.96□□□□□ -1.14
SMC4-212ENST00000470240 NPAS2Q99743 824 aa7.96□□□□□ -1.14
SMC4-212ENST00000470240 UNKQ9C0B0 810 aaKnown RBP7.96□□□□□ -1.14
SMC4-212ENST00000470240 DERL2Q9GZP9 239 aa7.96□□□□□ -1.14
SMC4-212ENST00000470240 MUC3BQ9H195 1237 aa7.96□□□□□ -1.14
SMC4-212ENST00000470240 EBF3Q9H4W6 596 aa7.96□□□□□ -1.14
SMC4-212ENST00000470240 GSTO2Q9H4Y5 243 aa7.96□□□□□ -1.14
SMC4-212ENST00000470240 RIC8BQ9NVN3 520 aa7.96□□□□□ -1.14
SMC4-212ENST00000470240 HSFX1Q9UBD0 423 aa7.96□□□□□ -1.14
SMC4-212ENST00000470240 SUN2Q9UH99 717 aa7.96□□□□□ -1.14
SMC4-212ENST00000470240 HCN2Q9UL51 889 aa7.96□□□□□ -1.14
SMC4-212ENST00000470240 MKL2Q9ULH7 1088 aa7.96□□□□□ -1.14
SMC4-212ENST00000470240 PKP3Q9Y446 797 aa7.96□□□□□ -1.14
SMC4-212ENST00000470240 C15orf38-AP3S2A0A0A6YYH1 394 aa7.95□□□□□ -1.14
SMC4-212ENST00000470240 LCHNA4D1U4 455 aa7.95□□□□□ -1.14
SMC4-212ENST00000470240 NEMP2A6NFY4 417 aa7.95□□□□□ -1.14
SMC4-212ENST00000470240 TMEM88BA6NKF7 163 aa7.95□□□□□ -1.14
SMC4-212ENST00000470240 EIF4E1BA6NMX2 242 aaKnown RBP7.95□□□□□ -1.14
SMC4-212ENST00000470240 TBKBP1A7MCY6 615 aa7.95□□□□□ -1.14
SMC4-212ENST00000470240 TMEM233B4DJY2 109 aa7.95□□□□□ -1.14
SMC4-212ENST00000470240 H0YJX3 145 aa7.95□□□□□ -1.14
SMC4-212ENST00000470240 STX16-NPEPL1H3BU86 382 aa7.95□□□□□ -1.14
SMC4-212ENST00000470240 NR5A2O00482 541 aa7.95□□□□□ -1.14
SMC4-212ENST00000470240 ENPP3O14638 875 aa7.95□□□□□ -1.14
SMC4-212ENST00000470240 STX16O14662 325 aa7.95□□□□□ -1.14
SMC4-212ENST00000470240 STX7O15400 261 aaKnown RBP7.95□□□□□ -1.14
SMC4-212ENST00000470240 TNFAIP8O95379 198 aa7.95□□□□□ -1.14
SMC4-212ENST00000470240 LATS1O95835 1130 aa7.95□□□□□ -1.14
SMC4-212ENST00000470240 TBX18O95935 607 aa7.95□□□□□ -1.14
SMC4-212ENST00000470240 LINGO3P0C6S8 592 aa7.95□□□□□ -1.14
SMC4-212ENST00000470240 IDO1P14902 403 aa7.95□□□□□ -1.14
SMC4-212ENST00000470240 VCLP18206 1134 aa7.95□□□□□ -1.14
SMC4-212ENST00000470240 XRCC1P18887 633 aaPredicted RBP7.95□□□□□ -1.14
SMC4-212ENST00000470240 PEX19P40855 299 aa7.95□□□□□ -1.14
SMC4-212ENST00000470240 SLC11A1P49279 550 aa7.95□□□□□ -1.14
SMC4-212ENST00000470240 ALDH7A1P49419 539 aaKnown RBP7.95□□□□□ -1.14
SMC4-212ENST00000470240 PGFP49763 221 aa7.95□□□□□ -1.14
SMC4-212ENST00000470240 SCNN1BP51168 640 aa7.95□□□□□ -1.14
SMC4-212ENST00000470240 ARSDP51689 593 aa7.95□□□□□ -1.14
SMC4-212ENST00000470240 ZNF140P52738 457 aaPredicted RBP7.95□□□□□ -1.14
SMC4-212ENST00000470240 AQP4P55087 323 aa7.95□□□□□ -1.14
SMC4-212ENST00000470240 KCNK10P57789 538 aa7.95□□□□□ -1.14
SMC4-212ENST00000470240 FOXM1Q08050 763 aa7.95□□□□□ -1.14
SMC4-212ENST00000470240 SFSWAPQ12872 951 aaKnown RBP7.95□□□□□ -1.14
SMC4-212ENST00000470240 BNIP2Q12982 314 aa7.95□□□□□ -1.14
SMC4-212ENST00000470240 LCP2Q13094 533 aa7.95□□□□□ -1.14
SMC4-212ENST00000470240 DUSP4Q13115 394 aa7.95□□□□□ -1.14
SMC4-212ENST00000470240 TRIM25Q14258 630 aaKnown RBP7.95□□□□□ -1.14
SMC4-212ENST00000470240 PDK3Q15120 406 aa7.95□□□□□ -1.14
SMC4-212ENST00000470240 ADRM1Q16186 407 aa7.95□□□□□ -1.14
SMC4-212ENST00000470240 PFKFB4Q16877 469 aa7.95□□□□□ -1.14
SMC4-212ENST00000470240 USP41Q3LFD5 358 aa7.95□□□□□ -1.14
SMC4-212ENST00000470240 AASDHQ4L235 1098 aaPredicted RBP7.95□□□□□ -1.14
SMC4-212ENST00000470240 UNC50Q53HI1 259 aa7.95□□□□□ -1.14
SMC4-212ENST00000470240 COQ5Q5HYK3 327 aa7.95□□□□□ -1.14
SMC4-212ENST00000470240 RASIP1Q5U651 963 aa7.95□□□□□ -1.14
SMC4-212ENST00000470240 IRAK1BP1Q5VVH5 260 aa7.95□□□□□ -1.14
SMC4-212ENST00000470240 LPCAT4Q643R3 524 aa7.95□□□□□ -1.14
SMC4-212ENST00000470240 CERS6Q6ZMG9 384 aa7.95□□□□□ -1.14
SMC4-212ENST00000470240 ATG14Q6ZNE5 492 aa7.95□□□□□ -1.14
SMC4-212ENST00000470240 ARPINQ7Z6K5 226 aa7.95□□□□□ -1.14
SMC4-212ENST00000470240 SYT9Q86SS6 491 aa7.95□□□□□ -1.14
SMC4-212ENST00000470240 ISCA2Q86U28 154 aa7.95□□□□□ -1.14
SMC4-212ENST00000470240 RTN4RL1Q86UN2 441 aaPredicted RBP7.95□□□□□ -1.14
SMC4-212ENST00000470240 PGBD5Q8N414 524 aa7.95□□□□□ -1.14
SMC4-212ENST00000470240 CHCHD4Q8N4Q1 142 aa7.95□□□□□ -1.14
SMC4-212ENST00000470240 LPCAT1Q8NF37 534 aa7.95□□□□□ -1.14
SMC4-212ENST00000470240 OR52K2Q8NGK3 314 aa7.95□□□□□ -1.14
SMC4-212ENST00000470240 GIPC2Q8TF65 315 aa7.95□□□□□ -1.14
SMC4-212ENST00000470240 TSPEARQ8WU66 669 aa7.95□□□□□ -1.14
SMC4-212ENST00000470240 TWIST2Q8WVJ9 160 aa7.95□□□□□ -1.14
SMC4-212ENST00000470240 LINC01599Q8WXQ3 324 aa7.95□□□□□ -1.14
SMC4-212ENST00000470240 CDKN2AIPNLQ96HQ2 116 aa7.95□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms