RNA–Protein interactions for RNA: ENST00000469129.1

SMC1A-205, Transcript of structural maintenance of chromosomes 1A, humanhuman

TSL 3

Gene SMC1A, Length 847 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-205ENST00000469129 HDAC3O15379 428 aa9.27□□□□□ -0.93
SMC1A-205ENST00000469129 ZBTB14O43829 449 aa9.27□□□□□ -0.93
SMC1A-205ENST00000469129 MAGEC1O60732 1142 aa9.27□□□□□ -0.93
SMC1A-205ENST00000469129 NIPSNAP2O75323 286 aa9.27□□□□□ -0.93
SMC1A-205ENST00000469129 SUPT3HO75486 399 aa9.27□□□□□ -0.93
SMC1A-205ENST00000469129 S100BP04271 92 aaPredicted RBP9.27□□□□□ -0.93
SMC1A-205ENST00000469129 PRSS56P0CW18 603 aa9.27□□□□□ -0.93
SMC1A-205ENST00000469129 ARSAP15289 507 aa9.27□□□□□ -0.93
SMC1A-205ENST00000469129 CHRM3P20309 590 aa9.27□□□□□ -0.93
SMC1A-205ENST00000469129 CALB2P22676 271 aa9.27□□□□□ -0.93
SMC1A-205ENST00000469129 GKP32189 559 aa9.27□□□□□ -0.93
SMC1A-205ENST00000469129 EIF2DP41214 584 aaKnown RBP9.27□□□□□ -0.93
SMC1A-205ENST00000469129 NSG1P42857 185 aa9.27□□□□□ -0.93
SMC1A-205ENST00000469129 NAGLUP54802 743 aa9.27□□□□□ -0.93
SMC1A-205ENST00000469129 IL2P60568 153 aa9.27□□□□□ -0.93
SMC1A-205ENST00000469129 HERVK_113P63132 956 aa9.27□□□□□ -0.93
SMC1A-205ENST00000469129 SATB1Q01826 763 aa9.27□□□□□ -0.93
SMC1A-205ENST00000469129 FCHO2Q0JRZ9 810 aa9.27□□□□□ -0.93
SMC1A-205ENST00000469129 SPRED3Q2MJR0 410 aa9.27□□□□□ -0.93
SMC1A-205ENST00000469129 TTLL9Q3SXZ7 439 aa9.27□□□□□ -0.93
SMC1A-205ENST00000469129 FNDC3BQ53EP0 1204 aaKnown RBP9.27□□□□□ -0.93
SMC1A-205ENST00000469129 ZNF805Q5CZA5 627 aa9.27□□□□□ -0.93
SMC1A-205ENST00000469129 TMEM215Q68D42 235 aa9.27□□□□□ -0.93
SMC1A-205ENST00000469129 TRIM68Q6AZZ1 485 aa9.27□□□□□ -0.93
SMC1A-205ENST00000469129 TXNDC11Q6PKC3 985 aa9.27□□□□□ -0.93
SMC1A-205ENST00000469129 TRIM67Q6ZTA4 783 aa9.27□□□□□ -0.93
SMC1A-205ENST00000469129 FRMD7Q6ZUT3 714 aa9.27□□□□□ -0.93
SMC1A-205ENST00000469129 ACAD11Q709F0 780 aa9.27□□□□□ -0.93
SMC1A-205ENST00000469129 DPPA4Q7L190 304 aa9.27□□□□□ -0.93
SMC1A-205ENST00000469129 DSG4Q86SJ6 1040 aa9.27□□□□□ -0.93
SMC1A-205ENST00000469129 ADAMTSL2Q86TH1 951 aa9.27□□□□□ -0.93
SMC1A-205ENST00000469129 ISCA2Q86U28 154 aa9.27□□□□□ -0.93
SMC1A-205ENST00000469129 ZSWIM9Q86XI8 627 aa9.27□□□□□ -0.93
SMC1A-205ENST00000469129 SUGP1Q8IWZ8 645 aaKnown RBP9.27□□□□□ -0.93
SMC1A-205ENST00000469129 C10orf67Q8IYJ2 551 aa9.27□□□□□ -0.93
SMC1A-205ENST00000469129 NXPE1Q8N323 547 aa9.27□□□□□ -0.93
SMC1A-205ENST00000469129 SPATA6LQ8N4H0 392 aa9.27□□□□□ -0.93
SMC1A-205ENST00000469129 ZNF781Q8N8C0 355 aa9.27□□□□□ -0.93
SMC1A-205ENST00000469129 TERB1Q8NA31 727 aa9.27□□□□□ -0.93
SMC1A-205ENST00000469129 CHST14Q8NCH0 376 aa9.27□□□□□ -0.93
SMC1A-205ENST00000469129 CD200R1Q8TD46 325 aa9.27□□□□□ -0.93
SMC1A-205ENST00000469129 CYB5D2Q8WUJ1 264 aa9.27□□□□□ -0.93
SMC1A-205ENST00000469129 ANKRD49Q8WVL7 239 aa9.27□□□□□ -0.93
SMC1A-205ENST00000469129 OR8D1Q8WZ84 308 aa9.27□□□□□ -0.93
SMC1A-205ENST00000469129 SGF29Q96ES7 293 aa9.27□□□□□ -0.93
SMC1A-205ENST00000469129 PPP1R16AQ96I34 528 aa9.27□□□□□ -0.93
SMC1A-205ENST00000469129 RIPOR3Q96MK2 946 aa9.27□□□□□ -0.93
SMC1A-205ENST00000469129 TMEM237Q96Q45 408 aa9.27□□□□□ -0.93
SMC1A-205ENST00000469129 PANX3Q96QZ0 392 aa9.27□□□□□ -0.93
SMC1A-205ENST00000469129 CDX2Q99626 313 aaPredicted RBP9.27□□□□□ -0.93
SMC1A-205ENST00000469129 FAM83CQ9BQN1 747 aa9.27□□□□□ -0.93
SMC1A-205ENST00000469129 ERVK-6Q9BXR3 956 aa9.27□□□□□ -0.93
SMC1A-205ENST00000469129 LRMDAQ9H2I8 198 aa9.27□□□□□ -0.93
SMC1A-205ENST00000469129 EBF3Q9H4W6 596 aa9.27□□□□□ -0.93
SMC1A-205ENST00000469129 IGFLR1Q9H665 355 aa9.27□□□□□ -0.93
SMC1A-205ENST00000469129 BRD9Q9H8M2 597 aa9.27□□□□□ -0.93
SMC1A-205ENST00000469129 PNPOQ9NVS9 261 aa9.27□□□□□ -0.93
SMC1A-205ENST00000469129 ELOVL2Q9NXB9 296 aa9.27□□□□□ -0.93
SMC1A-205ENST00000469129 ZDHHC3Q9NYG2 299 aa9.27□□□□□ -0.93
SMC1A-205ENST00000469129 GTSE1Q9NYZ3 720 aa9.27□□□□□ -0.93
SMC1A-205ENST00000469129 B4GALT6Q9UBX8 382 aa9.27□□□□□ -0.93
SMC1A-205ENST00000469129 FAM50BQ9Y247 325 aa9.27□□□□□ -0.93
SMC1A-205ENST00000469129 COL4A2P08572 1712 aa9.27□□□□□ -0.93
SMC1A-205ENST00000469129 EPOPA6NHQ4 379 aa9.26□□□□□ -0.93
SMC1A-205ENST00000469129 TTC34A8MYJ7 566 aa9.26□□□□□ -0.93
SMC1A-205ENST00000469129 CFAP99D6REC4 459 aa9.26□□□□□ -0.93
SMC1A-205ENST00000469129 STX16-NPEPL1H3BU86 382 aa9.26□□□□□ -0.93
SMC1A-205ENST00000469129 EIF3FO00303 357 aaPredicted RBP9.26□□□□□ -0.93
SMC1A-205ENST00000469129 MATN2O00339 956 aa9.26□□□□□ -0.93
SMC1A-205ENST00000469129 QSOX1O00391 747 aa9.26□□□□□ -0.93
SMC1A-205ENST00000469129 STX16O14662 325 aa9.26□□□□□ -0.93
SMC1A-205ENST00000469129 SLC22A2O15244 555 aa9.26□□□□□ -0.93
SMC1A-205ENST00000469129 DIAPH2O60879 1101 aa9.26□□□□□ -0.93
SMC1A-205ENST00000469129 LEFTY1O75610 366 aa9.26□□□□□ -0.93
SMC1A-205ENST00000469129 C1SP09871 688 aa9.26□□□□□ -0.93
SMC1A-205ENST00000469129 CBSLP0DN79 551 aa9.26□□□□□ -0.93
SMC1A-205ENST00000469129 CHRM1P11229 460 aaPredicted RBP9.26□□□□□ -0.93
SMC1A-205ENST00000469129 GFAPP14136 432 aa9.26□□□□□ -0.93
SMC1A-205ENST00000469129 EZRP15311 586 aaKnown RBP9.26□□□□□ -0.93
SMC1A-205ENST00000469129 IMPDH1P20839 514 aa9.26□□□□□ -0.93
SMC1A-205ENST00000469129 LHCGRP22888 699 aa9.26□□□□□ -0.93
SMC1A-205ENST00000469129 DGKAP23743 735 aa9.26□□□□□ -0.93
SMC1A-205ENST00000469129 FCARP24071 287 aa9.26□□□□□ -0.93
SMC1A-205ENST00000469129 MPSTP25325 297 aa9.26□□□□□ -0.93
SMC1A-205ENST00000469129 TARSP26639 723 aaKnown RBP9.26□□□□□ -0.93
SMC1A-205ENST00000469129 ARRB2P32121 409 aa9.26□□□□□ -0.93
SMC1A-205ENST00000469129 CBSP35520 551 aa9.26□□□□□ -0.93
SMC1A-205ENST00000469129 MTHFRP42898 656 aa9.26□□□□□ -0.93
SMC1A-205ENST00000469129 SPINT3P49223 89 aa9.26□□□□□ -0.93
SMC1A-205ENST00000469129 CDKN1CP49918 316 aaPredicted RBP9.26□□□□□ -0.93
SMC1A-205ENST00000469129 PGGT1BP53609 377 aa9.26□□□□□ -0.93
SMC1A-205ENST00000469129 TIAL1Q01085 375 aaKnown RBP eCLIP9.26□□□□□ -0.93
SMC1A-205ENST00000469129 KDSRQ06136 332 aa9.26□□□□□ -0.93
SMC1A-205ENST00000469129 ELP6Q0PNE2 266 aa9.26□□□□□ -0.93
SMC1A-205ENST00000469129 HYAL1Q12794 435 aa9.26□□□□□ -0.93
SMC1A-205ENST00000469129 GRIN2CQ14957 1233 aa9.26□□□□□ -0.93
SMC1A-205ENST00000469129 ARL13AQ5H913 290 aaPredicted RBP9.26□□□□□ -0.93
SMC1A-205ENST00000469129 ATAT1Q5SQI0 421 aa9.26□□□□□ -0.93
SMC1A-205ENST00000469129 METTL21CQ5VZV1 264 aa9.26□□□□□ -0.93
SMC1A-205ENST00000469129 PAQR3Q6TCH7 311 aa9.26□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms