RNA–Protein interactions for RNA: ENST00000468872.5

LSM5-209, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM5, Length 636 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-209ENST00000468872 BEST3Q8N1M1 668 aa5.07□□□□□ -1.6
LSM5-209ENST00000468872 PRR26Q8N8Z3 221 aa5.07□□□□□ -1.6
LSM5-209ENST00000468872 OR2AK2Q8NG84 335 aa5.07□□□□□ -1.6
LSM5-209ENST00000468872 ADAMTS14Q8WXS8 1223 aa5.07□□□□□ -1.6
LSM5-209ENST00000468872 ZNF479Q96JC4 524 aa5.07□□□□□ -1.6
LSM5-209ENST00000468872 CTAGE1Q96RT6 745 aa5.07□□□□□ -1.6
LSM5-209ENST00000468872 TMEM204Q9BSN7 226 aa5.07□□□□□ -1.6
LSM5-209ENST00000468872 KIFC3Q9BVG8 833 aa5.07□□□□□ -1.6
LSM5-209ENST00000468872 APOL6Q9BWW8 343 aa5.07□□□□□ -1.6
LSM5-209ENST00000468872 DCLK3Q9C098 648 aa5.07□□□□□ -1.6
LSM5-209ENST00000468872 OSGEPL1Q9H4B0 414 aa5.07□□□□□ -1.6
LSM5-209ENST00000468872 MAGIXQ9H6Y5 334 aa5.07□□□□□ -1.6
LSM5-209ENST00000468872 MARCH4Q9P2E8 410 aaPredicted RBP5.07□□□□□ -1.6
LSM5-209ENST00000468872 CPSF2Q9P2I0 782 aaKnown RBP5.07□□□□□ -1.6
LSM5-209ENST00000468872 LOC102723996A0A087X1L8 192 aa5.06□□□□□ -1.6
LSM5-209ENST00000468872 KANSL1LA0AUZ9 987 aa5.06□□□□□ -1.6
LSM5-209ENST00000468872 LNP1A1A4G5 178 aa5.06□□□□□ -1.6
LSM5-209ENST00000468872 CPED1A4D0V7 1026 aa5.06□□□□□ -1.6
LSM5-209ENST00000468872 OR6C75A6NL08 312 aa5.06□□□□□ -1.6
LSM5-209ENST00000468872 UBE2CO00762 179 aa5.06□□□□□ -1.6
LSM5-209ENST00000468872 SOCS6O14544 535 aa5.06□□□□□ -1.6
LSM5-209ENST00000468872 MAP2K7O14733 419 aa5.06□□□□□ -1.6
LSM5-209ENST00000468872 SMAD9O15198 467 aaKnown RBP5.06□□□□□ -1.6
LSM5-209ENST00000468872 PLRG1O43660 514 aaKnown RBP5.06□□□□□ -1.6
LSM5-209ENST00000468872 DDNO94850 711 aaPredicted RBP5.06□□□□□ -1.6
LSM5-209ENST00000468872 CH25HO95992 272 aa5.06□□□□□ -1.6
LSM5-209ENST00000468872 NGFRP08138 427 aa5.06□□□□□ -1.6
LSM5-209ENST00000468872 HOXD3P31249 432 aaPredicted RBP5.06□□□□□ -1.6
LSM5-209ENST00000468872 MMP14P50281 582 aa5.06□□□□□ -1.6
LSM5-209ENST00000468872 CSNK2A1P68400 391 aaPredicted RBP5.06□□□□□ -1.6
LSM5-209ENST00000468872 IRX6P78412 446 aaPredicted RBP5.06□□□□□ -1.6
LSM5-209ENST00000468872 CXCL9Q07325 125 aa5.06□□□□□ -1.6
LSM5-209ENST00000468872 Q0VFX4 171 aa5.06□□□□□ -1.6
LSM5-209ENST00000468872 GRAPQ13588 217 aa5.06□□□□□ -1.6
LSM5-209ENST00000468872 BAATQ14032 418 aaPredicted RBP5.06□□□□□ -1.6
LSM5-209ENST00000468872 NSUN5P2Q63ZY6 315 aa5.06□□□□□ -1.6
LSM5-209ENST00000468872 DUS1LQ6P1R4 473 aaKnown RBP5.06□□□□□ -1.6
LSM5-209ENST00000468872 KCTD18Q6PI47 426 aaPredicted RBP5.06□□□□□ -1.6
LSM5-209ENST00000468872 ADHFE1Q8IWW8 467 aa5.06□□□□□ -1.6
LSM5-209ENST00000468872 MCEMP1Q8IX19 187 aa5.06□□□□□ -1.6
LSM5-209ENST00000468872 MINDY1Q8N5J2 469 aa5.06□□□□□ -1.6
LSM5-209ENST00000468872 RBMXL3Q8N7X1 1067 aaKnown RBP5.06□□□□□ -1.6
LSM5-209ENST00000468872 SYT2Q8N9I0 419 aaPredicted RBP5.06□□□□□ -1.6
LSM5-209ENST00000468872 AVL9Q8NBF6 648 aa5.06□□□□□ -1.6
LSM5-209ENST00000468872 APPL2Q8NEU8 664 aa5.06□□□□□ -1.6
LSM5-209ENST00000468872 CSNK2A3Q8NEV1 391 aa5.06□□□□□ -1.6
LSM5-209ENST00000468872 OR1J2Q8NGS2 313 aa5.06□□□□□ -1.6
LSM5-209ENST00000468872 HM13Q8TCT9 377 aa5.06□□□□□ -1.6
LSM5-209ENST00000468872 ORAI1Q96D31 301 aa5.06□□□□□ -1.6
LSM5-209ENST00000468872 TMCO6Q96DC7 493 aa5.06□□□□□ -1.6
LSM5-209ENST00000468872 CEP295NLQ96MC4 621 aa5.06□□□□□ -1.6
LSM5-209ENST00000468872 C17orf75Q9HAS0 396 aa5.06□□□□□ -1.6
LSM5-209ENST00000468872 NOX4Q9NPH5 578 aa5.06□□□□□ -1.6
LSM5-209ENST00000468872 UBA2Q9UBT2 640 aaPredicted RBP5.06□□□□□ -1.6
LSM5-209ENST00000468872 GIMAP2Q9UG22 337 aa5.06□□□□□ -1.6
LSM5-209ENST00000468872 AGO1Q9UL18 857 aaKnown RBP5.06□□□□□ -1.6
LSM5-209ENST00000468872 ZNF711Q9Y462 761 aa5.06□□□□□ -1.6
LSM5-209ENST00000468872 ZNF644Q9H582 1327 aaPredicted RBP5.05□□□□□ -1.6
LSM5-209ENST00000468872 C4orf47A7E2U8 309 aa5.05□□□□□ -1.6
LSM5-209ENST00000468872 SLC28A2O43868 658 aa5.05□□□□□ -1.6
LSM5-209ENST00000468872 DKC1O60832 514 aaKnown RBP eCLIP5.05□□□□□ -1.6
LSM5-209ENST00000468872 AVILO75366 819 aa5.05□□□□□ -1.6
LSM5-209ENST00000468872 C21orf33P30042 268 aaPredicted RBP5.05□□□□□ -1.6
LSM5-209ENST00000468872 BDKRB2P30411 391 aa5.05□□□□□ -1.6
LSM5-209ENST00000468872 PPP5CP53041 499 aa5.05□□□□□ -1.6
LSM5-209ENST00000468872 HNRNPH2P55795 449 aaKnown RBP5.05□□□□□ -1.6
LSM5-209ENST00000468872 ZXDBP98169 803 aa5.05□□□□□ -1.6
LSM5-209ENST00000468872 C15orf59Q2T9L4 293 aaPredicted RBP5.05□□□□□ -1.6
LSM5-209ENST00000468872 AMZ1Q400G9 498 aa5.05□□□□□ -1.6
LSM5-209ENST00000468872 IGSF11Q5DX21 431 aa5.05□□□□□ -1.6
LSM5-209ENST00000468872 DCST1Q5T197 706 aa5.05□□□□□ -1.6
LSM5-209ENST00000468872 FRG2Q64ET8 278 aa5.05□□□□□ -1.6
LSM5-209ENST00000468872 ADALQ6DHV7 355 aa5.05□□□□□ -1.6
LSM5-209ENST00000468872 NRROSQ86YC3 692 aa5.05□□□□□ -1.6
LSM5-209ENST00000468872 EPHX4Q8IUS5 362 aa5.05□□□□□ -1.6
LSM5-209ENST00000468872 PCDH20Q8N6Y1 951 aaKnown RBP5.05□□□□□ -1.6
LSM5-209ENST00000468872 MOAP1Q96BY2 351 aa5.05□□□□□ -1.6
LSM5-209ENST00000468872 NUDCD1Q96RS6 583 aa5.05□□□□□ -1.6
LSM5-209ENST00000468872 KXD1Q9BQD3 176 aa5.05□□□□□ -1.6
LSM5-209ENST00000468872 MMTAG2Q9BU76 263 aaKnown RBP5.05□□□□□ -1.6
LSM5-209ENST00000468872 MRPL1Q9BYD6 325 aaKnown RBP5.05□□□□□ -1.6
LSM5-209ENST00000468872 DNAJB4Q9UDY4 337 aa5.05□□□□□ -1.6
LSM5-209ENST00000468872 STK39Q9UEW8 545 aa5.05□□□□□ -1.6
LSM5-209ENST00000468872 PROCRQ9UNN8 238 aa5.05□□□□□ -1.6
LSM5-209ENST00000468872 hCG_1809904A0A1W2PP81 198 aa5.04□□□□□ -1.6
LSM5-209ENST00000468872 A0A1W2PPE2 198 aa5.04□□□□□ -1.6
LSM5-209ENST00000468872 A0A1W2PR64 198 aa5.04□□□□□ -1.6
LSM5-209ENST00000468872 hDV102S1A0JD36 115 aa5.04□□□□□ -1.6
LSM5-209ENST00000468872 SPINT2O43291 252 aa5.04□□□□□ -1.6
LSM5-209ENST00000468872 PLPP2O43688 288 aa5.04□□□□□ -1.6
LSM5-209ENST00000468872 PRLRP16471 622 aa5.04□□□□□ -1.6
LSM5-209ENST00000468872 APOBEC1P41238 236 aaKnown RBP5.04□□□□□ -1.6
LSM5-209ENST00000468872 LMAN1P49257 510 aa5.04□□□□□ -1.6
LSM5-209ENST00000468872 KRTAP10-6P60371 365 aaPredicted RBP5.04□□□□□ -1.6
LSM5-209ENST00000468872 UBXN2AP68543 259 aa5.04□□□□□ -1.6
LSM5-209ENST00000468872 TMF1P82094 1093 aa5.04□□□□□ -1.6
LSM5-209ENST00000468872 AIMP1Q12904 312 aaKnown RBP5.04□□□□□ -1.6
LSM5-209ENST00000468872 LCN10Q6JVE6 187 aa5.04□□□□□ -1.6
LSM5-209ENST00000468872 CCDC190Q86UF4 302 aa5.04□□□□□ -1.6
LSM5-209ENST00000468872 CHERPQ8IWX8 916 aaKnown RBP5.04□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms