RNA–Protein interactions for RNA: ENST00000463622.6

SCFD1-204, Transcript of sec1 family domain containing 1, humanhuman

TSL 2

Gene SCFD1, Length 1,943 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-204ENST00000463622 MEA1Q16626 185 aa3.74□□□□□ -1.81
SCFD1-204ENST00000463622 SGSM1Q2NKQ1 1148 aa3.74□□□□□ -1.81
SCFD1-204ENST00000463622 COLEC12Q5KU26 742 aa3.74□□□□□ -1.81
SCFD1-204ENST00000463622 SDHAF4Q5VUM1 108 aa3.74□□□□□ -1.81
SCFD1-204ENST00000463622 ZNF280DQ6N043 979 aa3.74□□□□□ -1.81
SCFD1-204ENST00000463622 DSTYKQ6XUX3 929 aa3.74□□□□□ -1.81
SCFD1-204ENST00000463622 TOGARAM2Q6ZUX3 1019 aa3.74□□□□□ -1.81
SCFD1-204ENST00000463622 LPCAT2Q7L5N7 544 aa3.74□□□□□ -1.81
SCFD1-204ENST00000463622 PHLDB2Q86SQ0 1253 aa3.74□□□□□ -1.81
SCFD1-204ENST00000463622 TMEM150AQ86TG1 271 aa3.74□□□□□ -1.81
SCFD1-204ENST00000463622 TTC30AQ86WT1 665 aa3.74□□□□□ -1.81
SCFD1-204ENST00000463622 LRRC8AQ8IWT6 810 aa3.74□□□□□ -1.81
SCFD1-204ENST00000463622 ADGRF2Q8IZF7 708 aa3.74□□□□□ -1.81
SCFD1-204ENST00000463622 CMTM8Q8IZV2 173 aa3.74□□□□□ -1.81
SCFD1-204ENST00000463622 LNX2Q8N448 690 aa3.74□□□□□ -1.81
SCFD1-204ENST00000463622 WDTC1Q8N5D0 677 aa3.74□□□□□ -1.81
SCFD1-204ENST00000463622 ACRBPQ8NEB7 543 aa3.74□□□□□ -1.81
SCFD1-204ENST00000463622 TMIEQ8NEW7 156 aa3.74□□□□□ -1.81
SCFD1-204ENST00000463622 ZMIZ2Q8NF64 920 aa3.74□□□□□ -1.81
SCFD1-204ENST00000463622 NLGN4YQ8NFZ3 816 aaPredicted RBP3.74□□□□□ -1.81
SCFD1-204ENST00000463622 RPLP0P6Q8NHW5 317 aa3.74□□□□□ -1.81
SCFD1-204ENST00000463622 CCDC26Q8TAB7 109 aa3.74□□□□□ -1.81
SCFD1-204ENST00000463622 CEP76Q8TAP6 659 aa3.74□□□□□ -1.81
SCFD1-204ENST00000463622 UBA3Q8TBC4 463 aa3.74□□□□□ -1.81
SCFD1-204ENST00000463622 USP13Q92995 863 aaPredicted RBP3.74□□□□□ -1.81
SCFD1-204ENST00000463622 PIWIL1Q96J94 861 aaKnown RBP3.74□□□□□ -1.81
SCFD1-204ENST00000463622 TEKT5Q96M29 485 aa3.74□□□□□ -1.81
SCFD1-204ENST00000463622 ZNF560Q96MR9 790 aa3.74□□□□□ -1.81
SCFD1-204ENST00000463622 DMRTA2Q96SC8 542 aa3.74□□□□□ -1.81
SCFD1-204ENST00000463622 MMS19Q96T76 1030 aa3.74□□□□□ -1.81
SCFD1-204ENST00000463622 VRK1Q99986 396 aaPredicted RBP3.74□□□□□ -1.81
SCFD1-204ENST00000463622 SPATA5L1Q9BVQ7 753 aa3.74□□□□□ -1.81
SCFD1-204ENST00000463622 STK33Q9BYT3 514 aa3.74□□□□□ -1.81
SCFD1-204ENST00000463622 EBF3Q9H4W6 596 aa3.74□□□□□ -1.81
SCFD1-204ENST00000463622 HAUS4Q9H6D7 363 aa3.74□□□□□ -1.81
SCFD1-204ENST00000463622 DDX43Q9NXZ2 648 aaKnown RBP3.74□□□□□ -1.81
SCFD1-204ENST00000463622 TRIM10Q9UDY6 481 aa3.74□□□□□ -1.81
SCFD1-204ENST00000463622 DMTF1Q9Y222 760 aa3.74□□□□□ -1.81
SCFD1-204ENST00000463622 RAI2Q9Y5P3 530 aa3.74□□□□□ -1.81
SCFD1-204ENST00000463622 CFAP46Q8IYW2 2715 aa3.74□□□□□ -1.81
SCFD1-204ENST00000463622 ZNF462Q96JM2 2506 aa3.74□□□□□ -1.81
SCFD1-204ENST00000463622 OR6C75A6NL08 312 aa3.74□□□□□ -1.81
SCFD1-204ENST00000463622 A8MXQ7 604 aa3.74□□□□□ -1.81
SCFD1-204ENST00000463622 K7EQS6 105 aa3.74□□□□□ -1.81
SCFD1-204ENST00000463622 O00370 1275 aa3.74□□□□□ -1.81
SCFD1-204ENST00000463622 YY2O15391 372 aa3.74□□□□□ -1.81
SCFD1-204ENST00000463622 PEX1O43933 1283 aa3.74□□□□□ -1.81
SCFD1-204ENST00000463622 SH3BP5O60239 455 aa3.74□□□□□ -1.81
SCFD1-204ENST00000463622 TACC1O75410 805 aa3.74□□□□□ -1.81
SCFD1-204ENST00000463622 TPM2P07951 284 aa3.74□□□□□ -1.81
SCFD1-204ENST00000463622 MTHFD1P11586 935 aaKnown RBP3.74□□□□□ -1.81
SCFD1-204ENST00000463622 ARSAP15289 507 aa3.74□□□□□ -1.81
SCFD1-204ENST00000463622 CYP11B1P15538 503 aa3.74□□□□□ -1.81
SCFD1-204ENST00000463622 LMO1P25800 156 aa3.74□□□□□ -1.81
SCFD1-204ENST00000463622 GABRR2P28476 465 aa3.74□□□□□ -1.81
SCFD1-204ENST00000463622 ADORA2BP29275 332 aa3.74□□□□□ -1.81
SCFD1-204ENST00000463622 ATICP31939 592 aa3.74□□□□□ -1.81
SCFD1-204ENST00000463622 HNRNPH3P31942 346 aaKnown RBP3.74□□□□□ -1.81
SCFD1-204ENST00000463622 PRKCIP41743 596 aa3.74□□□□□ -1.81
SCFD1-204ENST00000463622 DHPSP49366 369 aaPredicted RBP3.74□□□□□ -1.81
SCFD1-204ENST00000463622 SLC16A1P53985 500 aa3.74□□□□□ -1.81
SCFD1-204ENST00000463622 TNNC1P63316 161 aa3.74□□□□□ -1.81
SCFD1-204ENST00000463622 GFPT1Q06210 699 aaPredicted RBP3.74□□□□□ -1.81
SCFD1-204ENST00000463622 CCDC173Q0VFZ6 552 aa3.74□□□□□ -1.81
SCFD1-204ENST00000463622 ZNF268Q14587 947 aaPredicted RBP3.74□□□□□ -1.81
SCFD1-204ENST00000463622 ASIC2Q16515 512 aa3.74□□□□□ -1.81
SCFD1-204ENST00000463622 DUOXA1Q1HG43 343 aa3.74□□□□□ -1.81
SCFD1-204ENST00000463622 GOLGA7BQ2TAP0 167 aa3.74□□□□□ -1.81
SCFD1-204ENST00000463622 ARHGAP15Q53QZ3 475 aa3.74□□□□□ -1.81
SCFD1-204ENST00000463622 MDH1BQ5I0G3 518 aa3.74□□□□□ -1.81
SCFD1-204ENST00000463622 SFMBT2Q5VUG0 894 aa3.74□□□□□ -1.81
SCFD1-204ENST00000463622 ZNF843Q8N446 348 aa3.74□□□□□ -1.81
SCFD1-204ENST00000463622 HDDC3Q8N4P3 179 aa3.74□□□□□ -1.81
SCFD1-204ENST00000463622 ATAD1Q8NBU5 361 aa3.74□□□□□ -1.81
SCFD1-204ENST00000463622 C1orf131Q8NDD1 294 aaKnown RBP3.74□□□□□ -1.81
SCFD1-204ENST00000463622 TSTD1Q8NFU3 115 aa3.74□□□□□ -1.81
SCFD1-204ENST00000463622 OR6B3Q8NGW1 331 aa3.74□□□□□ -1.81
SCFD1-204ENST00000463622 NDRG1Q92597 394 aaKnown RBP3.74□□□□□ -1.81
SCFD1-204ENST00000463622 MYLPFQ96A32 169 aa3.74□□□□□ -1.81
SCFD1-204ENST00000463622 EXOC4Q96A65 974 aa3.74□□□□□ -1.81
SCFD1-204ENST00000463622 ARHGEF26Q96DR7 871 aa3.74□□□□□ -1.81
SCFD1-204ENST00000463622 MRGPRX4Q96LA9 322 aa3.74□□□□□ -1.81
SCFD1-204ENST00000463622 CAMK1GQ96NX5 476 aa3.74□□□□□ -1.81
SCFD1-204ENST00000463622 PGLYRP2Q96PD5 576 aa3.74□□□□□ -1.81
SCFD1-204ENST00000463622 SYT15Q9BQS2 421 aa3.74□□□□□ -1.81
SCFD1-204ENST00000463622 B3GNT5Q9BYG0 378 aa3.74□□□□□ -1.81
SCFD1-204ENST00000463622 ZNF518BQ9C0D4 1074 aa3.74□□□□□ -1.81
SCFD1-204ENST00000463622 PRORYQ9H606 182 aa3.74□□□□□ -1.81
SCFD1-204ENST00000463622 ECT2Q9H8V3 914 aa3.74□□□□□ -1.81
SCFD1-204ENST00000463622 AIPL1Q9NZN9 384 aa3.74□□□□□ -1.81
SCFD1-204ENST00000463622 CTTNBP2NLQ9P2B4 639 aa3.74□□□□□ -1.81
SCFD1-204ENST00000463622 GTF3C4Q9UKN8 822 aa3.74□□□□□ -1.81
SCFD1-204ENST00000463622 CCL26Q9Y258 94 aa3.74□□□□□ -1.81
SCFD1-204ENST00000463622 LUC7L2Q9Y383 392 aaKnown RBP3.74□□□□□ -1.81
SCFD1-204ENST00000463622 RALGAPA1Q6GYQ0 2036 aa3.73□□□□□ -1.81
SCFD1-204ENST00000463622 ABCA7Q8IZY2 2146 aa3.73□□□□□ -1.81
SCFD1-204ENST00000463622 GON4LQ3T8J9 2241 aa3.73□□□□□ -1.81
SCFD1-204ENST00000463622 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa3.73□□□□□ -1.81
SCFD1-204ENST00000463622 ANTXRLA6NF34 631 aa3.73□□□□□ -1.81
SCFD1-204ENST00000463622 TRABD2BA6NFA1 517 aa3.73□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms