RNA–Protein interactions for RNA: ENST00000462198.5

SMARCC1-204, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

TSL 2

Gene SMARCC1, Length 785 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-204ENST00000462198 ALDH3A1P30838 453 aa6.02□□□□□ -1.45
SMARCC1-204ENST00000462198 CCT5P48643 541 aa6.02□□□□□ -1.45
SMARCC1-204ENST00000462198 HDAC4P56524 1084 aa6.02□□□□□ -1.45
SMARCC1-204ENST00000462198 ARPC4P59998 168 aa6.02□□□□□ -1.45
SMARCC1-204ENST00000462198 MRPS35P82673 323 aaKnown RBP6.02□□□□□ -1.45
SMARCC1-204ENST00000462198 ZBTB16Q05516 673 aa6.02□□□□□ -1.45
SMARCC1-204ENST00000462198 KCNAB2Q13303 367 aa6.02□□□□□ -1.45
SMARCC1-204ENST00000462198 EIF4EBP2Q13542 120 aaPredicted RBP6.02□□□□□ -1.45
SMARCC1-204ENST00000462198 BRMS1LQ5PSV4 323 aa6.02□□□□□ -1.45
SMARCC1-204ENST00000462198 MANEAQ5SRI9 462 aa6.02□□□□□ -1.45
SMARCC1-204ENST00000462198 ZFYVE27Q5T4F4 411 aa6.02□□□□□ -1.45
SMARCC1-204ENST00000462198 OTUD1Q5VV17 481 aaPredicted RBP6.02□□□□□ -1.45
SMARCC1-204ENST00000462198 C1QL3Q5VWW1 255 aa6.02□□□□□ -1.45
SMARCC1-204ENST00000462198 RAP1GAP2Q684P5 730 aa6.02□□□□□ -1.45
SMARCC1-204ENST00000462198 NADSYN1Q6IA69 706 aa6.02□□□□□ -1.45
SMARCC1-204ENST00000462198 RFWD3Q6PCD5 774 aa6.02□□□□□ -1.45
SMARCC1-204ENST00000462198 NCEH1Q6PIU2 408 aa6.02□□□□□ -1.45
SMARCC1-204ENST00000462198 BZW1Q7L1Q6 419 aaKnown RBP6.02□□□□□ -1.45
SMARCC1-204ENST00000462198 SLFN11Q7Z7L1 901 aa6.02□□□□□ -1.45
SMARCC1-204ENST00000462198 ZC3H18Q86VM9 953 aaKnown RBP6.02□□□□□ -1.45
SMARCC1-204ENST00000462198 CHSY1Q86X52 802 aa6.02□□□□□ -1.45
SMARCC1-204ENST00000462198 FAM131BQ86XD5 332 aa6.02□□□□□ -1.45
SMARCC1-204ENST00000462198 RHOT2Q8IXI1 618 aa6.02□□□□□ -1.45
SMARCC1-204ENST00000462198 RAVER1Q8IY67 606 aaKnown RBP6.02□□□□□ -1.45
SMARCC1-204ENST00000462198 LGI2Q8N0V4 545 aa6.02□□□□□ -1.45
SMARCC1-204ENST00000462198 IQCKQ8N0W5 287 aa6.02□□□□□ -1.45
SMARCC1-204ENST00000462198 CPXM2Q8N436 756 aa6.02□□□□□ -1.45
SMARCC1-204ENST00000462198 MREGQ8N565 214 aa6.02□□□□□ -1.45
SMARCC1-204ENST00000462198 ZNF366Q8N895 744 aa6.02□□□□□ -1.45
SMARCC1-204ENST00000462198 EIF1ADQ8N9N8 165 aaKnown RBP6.02□□□□□ -1.45
SMARCC1-204ENST00000462198 MFSD2AQ8NA29 543 aa6.02□□□□□ -1.45
SMARCC1-204ENST00000462198 OR4C6Q8NH72 309 aa6.02□□□□□ -1.45
SMARCC1-204ENST00000462198 SLC35G2Q8TBE7 412 aa6.02□□□□□ -1.45
SMARCC1-204ENST00000462198 FNIP1Q8TF40 1166 aa6.02□□□□□ -1.45
SMARCC1-204ENST00000462198 DDI1Q8WTU0 396 aa6.02□□□□□ -1.45
SMARCC1-204ENST00000462198 TEKT4Q8WW24 435 aa6.02□□□□□ -1.45
SMARCC1-204ENST00000462198 DYDC1Q8WWB3 177 aa6.02□□□□□ -1.45
SMARCC1-204ENST00000462198 HTR3CQ8WXA8 447 aa6.02□□□□□ -1.45
SMARCC1-204ENST00000462198 CENPIQ92674 756 aaPredicted RBP6.02□□□□□ -1.45
SMARCC1-204ENST00000462198 TMA16Q96EY4 203 aaKnown RBP6.02□□□□□ -1.45
SMARCC1-204ENST00000462198 SERAC1Q96JX3 654 aa6.02□□□□□ -1.45
SMARCC1-204ENST00000462198 BTBD6Q96KE9 485 aa6.02□□□□□ -1.45
SMARCC1-204ENST00000462198 APOLD1Q96LR9 279 aa6.02□□□□□ -1.45
SMARCC1-204ENST00000462198 SMC6Q96SB8 1091 aa6.02□□□□□ -1.45
SMARCC1-204ENST00000462198 CAPS2Q9BXY5 557 aa6.02□□□□□ -1.45
SMARCC1-204ENST00000462198 CIPCQ9C0C6 399 aa6.02□□□□□ -1.45
SMARCC1-204ENST00000462198 SIK2Q9H0K1 926 aa6.02□□□□□ -1.45
SMARCC1-204ENST00000462198 ZNF71Q9NQZ8 489 aaPredicted RBP6.02□□□□□ -1.45
SMARCC1-204ENST00000462198 UCKL1Q9NWZ5 548 aa6.02□□□□□ -1.45
SMARCC1-204ENST00000462198 FBXL12Q9NXK8 326 aa6.02□□□□□ -1.45
SMARCC1-204ENST00000462198 ARHGEF38Q9NXL2 777 aa6.02□□□□□ -1.45
SMARCC1-204ENST00000462198 NOP53Q9NZM5 478 aaKnown RBP6.02□□□□□ -1.45
SMARCC1-204ENST00000462198 CTNNAL1Q9UBT7 734 aa6.02□□□□□ -1.45
SMARCC1-204ENST00000462198 STOML2Q9UJZ1 356 aa6.02□□□□□ -1.45
SMARCC1-204ENST00000462198 CROTQ9UKG9 612 aa6.02□□□□□ -1.45
SMARCC1-204ENST00000462198 COL27A1Q8IZC6 1860 aaPredicted RBP6.01□□□□□ -1.45
SMARCC1-204ENST00000462198 LRRC72A6NJI9 287 aa6.01□□□□□ -1.45
SMARCC1-204ENST00000462198 FFAR2O15552 330 aa6.01□□□□□ -1.45
SMARCC1-204ENST00000462198 PRPSAP2O60256 369 aa6.01□□□□□ -1.45
SMARCC1-204ENST00000462198 BUB1BO60566 1050 aaPredicted RBP6.01□□□□□ -1.45
SMARCC1-204ENST00000462198 MAGEC1O60732 1142 aa6.01□□□□□ -1.45
SMARCC1-204ENST00000462198 TBL1XO60907 577 aa6.01□□□□□ -1.45
SMARCC1-204ENST00000462198 SRGAP2O75044 1071 aa6.01□□□□□ -1.45
SMARCC1-204ENST00000462198 SMIM24O75264 130 aa6.01□□□□□ -1.45
SMARCC1-204ENST00000462198 SEMA7AO75326 666 aa6.01□□□□□ -1.45
SMARCC1-204ENST00000462198 HTR3BO95264 441 aa6.01□□□□□ -1.45
SMARCC1-204ENST00000462198 ITGA2BP08514 1039 aa6.01□□□□□ -1.45
SMARCC1-204ENST00000462198 KRT7P08729 469 aa6.01□□□□□ -1.45
SMARCC1-204ENST00000462198 RNF224P0DH78 156 aa6.01□□□□□ -1.45
SMARCC1-204ENST00000462198 WT1P19544 449 aaPredicted RBP6.01□□□□□ -1.45
SMARCC1-204ENST00000462198 TACR2P21452 398 aa6.01□□□□□ -1.45
SMARCC1-204ENST00000462198 MIPP30301 263 aa6.01□□□□□ -1.45
SMARCC1-204ENST00000462198 SLC6A4P31645 630 aa6.01□□□□□ -1.45
SMARCC1-204ENST00000462198 ADRA1BP35368 520 aa6.01□□□□□ -1.45
SMARCC1-204ENST00000462198 VAV2P52735 878 aa6.01□□□□□ -1.45
SMARCC1-204ENST00000462198 AIF1P55008 147 aa6.01□□□□□ -1.45
SMARCC1-204ENST00000462198 POLE2P56282 527 aa6.01□□□□□ -1.45
SMARCC1-204ENST00000462198 MRPS25P82663 173 aaKnown RBP6.01□□□□□ -1.45
SMARCC1-204ENST00000462198 KIF5AQ12840 1032 aa6.01□□□□□ -1.45
SMARCC1-204ENST00000462198 AUHQ13825 339 aaKnown RBP6.01□□□□□ -1.45
SMARCC1-204ENST00000462198 MAP7Q14244 749 aa6.01□□□□□ -1.45
SMARCC1-204ENST00000462198 MESDQ14696 234 aa6.01□□□□□ -1.45
SMARCC1-204ENST00000462198 HADHQ16836 314 aaKnown RBP6.01□□□□□ -1.45
SMARCC1-204ENST00000462198 C21orf62-AS1Q17RA5 79 aa6.01□□□□□ -1.45
SMARCC1-204ENST00000462198 MPPE1Q53F39 396 aa6.01□□□□□ -1.45
SMARCC1-204ENST00000462198 GLE1Q53GS7 698 aaKnown RBP6.01□□□□□ -1.45
SMARCC1-204ENST00000462198 RAB6CQ53S08 254 aa6.01□□□□□ -1.45
SMARCC1-204ENST00000462198 FAM133BQ5BKY9 247 aaKnown RBP6.01□□□□□ -1.45
SMARCC1-204ENST00000462198 MS4A13Q5J8X5 152 aa6.01□□□□□ -1.45
SMARCC1-204ENST00000462198 PERM1Q5SV97 790 aa6.01□□□□□ -1.45
SMARCC1-204ENST00000462198 PIK3R6Q5UE93 754 aa6.01□□□□□ -1.45
SMARCC1-204ENST00000462198 TMEM215Q68D42 235 aa6.01□□□□□ -1.45
SMARCC1-204ENST00000462198 CYB5D1Q6P9G0 228 aa6.01□□□□□ -1.45
SMARCC1-204ENST00000462198 EMBQ6PCB8 327 aa6.01□□□□□ -1.45
SMARCC1-204ENST00000462198 BORAQ6PGQ7 559 aa6.01□□□□□ -1.45
SMARCC1-204ENST00000462198 USP30Q70CQ3 517 aa6.01□□□□□ -1.45
SMARCC1-204ENST00000462198 MAMDC2Q7Z304 686 aaPredicted RBP6.01□□□□□ -1.45
SMARCC1-204ENST00000462198 BNIPLQ7Z465 357 aa6.01□□□□□ -1.45
SMARCC1-204ENST00000462198 VASH2Q86V25 355 aa6.01□□□□□ -1.45
SMARCC1-204ENST00000462198 CREG2Q8IUH2 290 aa6.01□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 57.5 ms