RNA–Protein interactions for RNA: ENST00000460767.5

SCAMP4-206, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 4

Gene SCAMP4, Length 569 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-206ENST00000460767 WDR70Q9NW82 654 aa13.59□□□□□ -0.23
SCAMP4-206ENST00000460767 GUCA1BQ9UMX6 200 aa13.59□□□□□ -0.23
SCAMP4-206ENST00000460767 DGKBQ9Y6T7 804 aa13.59□□□□□ -0.23
SCAMP4-206ENST00000460767 LOC285095A0A1B0GVY8 99 aa13.58□□□□□ -0.24
SCAMP4-206ENST00000460767 TCRBV7S2A1N4TA0A589 114 aa13.58□□□□□ -0.24
SCAMP4-206ENST00000460767 ANKRD66B4E2M5 251 aa13.58□□□□□ -0.24
SCAMP4-206ENST00000460767 NUDT21O43809 227 aaKnown RBP13.58□□□□□ -0.24
SCAMP4-206ENST00000460767 TJP3O95049 919 aa13.58□□□□□ -0.24
SCAMP4-206ENST00000460767 SOD1P00441 154 aa13.58□□□□□ -0.24
SCAMP4-206ENST00000460767 EPOP01588 193 aa13.58□□□□□ -0.24
SCAMP4-206ENST00000460767 HTR1BP28222 390 aa13.58□□□□□ -0.24
SCAMP4-206ENST00000460767 TEAD1P28347 426 aa13.58□□□□□ -0.24
SCAMP4-206ENST00000460767 STC1P52823 247 aa13.58□□□□□ -0.24
SCAMP4-206ENST00000460767 PTSQ03393 145 aa13.58□□□□□ -0.24
SCAMP4-206ENST00000460767 DPTQ07507 201 aa13.58□□□□□ -0.24
SCAMP4-206ENST00000460767 LRRC14Q15048 493 aa13.58□□□□□ -0.24
SCAMP4-206ENST00000460767 SIX1Q15475 284 aaPredicted RBP13.58□□□□□ -0.24
SCAMP4-206ENST00000460767 QPCTQ16769 361 aa13.58□□□□□ -0.24
SCAMP4-206ENST00000460767 SKIDA1Q1XH10 827 aa13.58□□□□□ -0.24
SCAMP4-206ENST00000460767 CFAP58Q5T655 872 aa13.58□□□□□ -0.24
SCAMP4-206ENST00000460767 HSD11B1LQ7Z5J1 315 aa13.58□□□□□ -0.24
SCAMP4-206ENST00000460767 ZC3H18Q86VM9 953 aaKnown RBP13.58□□□□□ -0.24
SCAMP4-206ENST00000460767 REXO1L1PQ8IX06 675 aa13.58□□□□□ -0.24
SCAMP4-206ENST00000460767 PLA2G15Q8NCC3 412 aa13.58□□□□□ -0.24
SCAMP4-206ENST00000460767 ATL2Q8NHH9 583 aa13.58□□□□□ -0.24
SCAMP4-206ENST00000460767 NKD1Q969G9 470 aa13.58□□□□□ -0.24
SCAMP4-206ENST00000460767 HAUS1Q96CS2 278 aa13.58□□□□□ -0.24
SCAMP4-206ENST00000460767 DTD2Q96FN9 168 aa13.58□□□□□ -0.24
SCAMP4-206ENST00000460767 OXNAD1Q96HP4 312 aaPredicted RBP13.58□□□□□ -0.24
SCAMP4-206ENST00000460767 AGAP3Q96P47 875 aa13.58□□□□□ -0.24
SCAMP4-206ENST00000460767 FCRL5Q96RD9 977 aa13.58□□□□□ -0.24
SCAMP4-206ENST00000460767 TLR10Q9BXR5 811 aa13.58□□□□□ -0.24
SCAMP4-206ENST00000460767 CARD9Q9H257 536 aa13.58□□□□□ -0.24
SCAMP4-206ENST00000460767 SIRPGQ9P1W8 387 aa13.58□□□□□ -0.24
SCAMP4-206ENST00000460767 CHKBQ9Y259 395 aa13.58□□□□□ -0.24
SCAMP4-206ENST00000460767 RNF215Q9Y6U7 377 aa13.58□□□□□ -0.24
SCAMP4-206ENST00000460767 CAPN5O15484 640 aaPredicted RBP13.57□□□□□ -0.24
SCAMP4-206ENST00000460767 MT-CYBP00156 380 aaPredicted RBP13.57□□□□□ -0.24
SCAMP4-206ENST00000460767 ELFN1P0C7U0 828 aa13.57□□□□□ -0.24
SCAMP4-206ENST00000460767 RBP3P10745 1247 aa13.57□□□□□ -0.24
SCAMP4-206ENST00000460767 CTSEP14091 401 aa13.57□□□□□ -0.24
SCAMP4-206ENST00000460767 ZNF30P17039 623 aa13.57□□□□□ -0.24
SCAMP4-206ENST00000460767 XPAP23025 273 aaPredicted RBP13.57□□□□□ -0.24
SCAMP4-206ENST00000460767 RBL1P28749 1068 aa13.57□□□□□ -0.24
SCAMP4-206ENST00000460767 CCR10P46092 362 aa13.57□□□□□ -0.24
SCAMP4-206ENST00000460767 MTM1Q13496 603 aa13.57□□□□□ -0.24
SCAMP4-206ENST00000460767 HLTFQ14527 1009 aaKnown RBP eCLIP13.57□□□□□ -0.24
SCAMP4-206ENST00000460767 NR1D2Q14995 579 aa13.57□□□□□ -0.24
SCAMP4-206ENST00000460767 OASLQ15646 514 aaKnown RBP13.57□□□□□ -0.24
SCAMP4-206ENST00000460767 C4orf17Q53FE4 359 aa13.57□□□□□ -0.24
SCAMP4-206ENST00000460767 LRRC66Q68CR7 880 aa13.57□□□□□ -0.24
SCAMP4-206ENST00000460767 USP45Q70EL2 814 aa13.57□□□□□ -0.24
SCAMP4-206ENST00000460767 TMPRSS9Q7Z410 1059 aa13.57□□□□□ -0.24
SCAMP4-206ENST00000460767 PTRH1Q86Y79 214 aaKnown RBP13.57□□□□□ -0.24
SCAMP4-206ENST00000460767 TRIM58Q8NG06 486 aa13.57□□□□□ -0.24
SCAMP4-206ENST00000460767 SPATA22Q8NHS9 363 aa13.57□□□□□ -0.24
SCAMP4-206ENST00000460767 PDCD6IPQ8WUM4 868 aaKnown RBP13.57□□□□□ -0.24
SCAMP4-206ENST00000460767 RTP4Q96DX8 246 aa13.57□□□□□ -0.24
SCAMP4-206ENST00000460767 WDR24Q96S15 920 aa13.57□□□□□ -0.24
SCAMP4-206ENST00000460767 KCTD5Q9NXV2 234 aa13.57□□□□□ -0.24
SCAMP4-206ENST00000460767 AKAP7Q9P0M2 348 aaPredicted RBP13.57□□□□□ -0.24
SCAMP4-206ENST00000460767 NFKBIL1Q9UBC1 381 aaPredicted RBP13.57□□□□□ -0.24
SCAMP4-206ENST00000460767 TRHDEQ9UKU6 1024 aa13.57□□□□□ -0.24
SCAMP4-206ENST00000460767 R3HDM2Q9Y2K5 976 aaKnown RBP13.57□□□□□ -0.24
SCAMP4-206ENST00000460767 RELNP78509 3460 aa13.57□□□□□ -0.24
SCAMP4-206ENST00000460767 TEX15Q9BXT5 2789 aa13.57□□□□□ -0.24
SCAMP4-206ENST00000460767 UNC13CQ8NB66 2214 aa13.56□□□□□ -0.24
SCAMP4-206ENST00000460767 USP9YO00507 2555 aaPredicted RBP13.56□□□□□ -0.24
SCAMP4-206ENST00000460767 A0A0U1RQS6 177 aa13.56□□□□□ -0.24
SCAMP4-206ENST00000460767 ZNF891A8MT65 544 aaPredicted RBP13.56□□□□□ -0.24
SCAMP4-206ENST00000460767 CYP2A6P11509 494 aaPredicted RBP13.56□□□□□ -0.24
SCAMP4-206ENST00000460767 CTPS1P17812 591 aa13.56□□□□□ -0.24
SCAMP4-206ENST00000460767 NFKB1P19838 968 aa13.56□□□□□ -0.24
SCAMP4-206ENST00000460767 CA4P22748 312 aa13.56□□□□□ -0.24
SCAMP4-206ENST00000460767 ARSDP51689 593 aa13.56□□□□□ -0.24
SCAMP4-206ENST00000460767 MAPK10P53779 464 aa13.56□□□□□ -0.24
SCAMP4-206ENST00000460767 SRP54P61011 504 aaKnown RBP13.56□□□□□ -0.24
SCAMP4-206ENST00000460767 ITKQ08881 620 aa13.56□□□□□ -0.24
SCAMP4-206ENST00000460767 MSLNQ13421 630 aaPredicted RBP13.56□□□□□ -0.24
SCAMP4-206ENST00000460767 INPP5AQ14642 412 aa13.56□□□□□ -0.24
SCAMP4-206ENST00000460767 C16orf72Q14CZ0 275 aa13.56□□□□□ -0.24
SCAMP4-206ENST00000460767 IGFBP7Q16270 282 aa13.56□□□□□ -0.24
SCAMP4-206ENST00000460767 C14orf28Q4W4Y0 310 aa13.56□□□□□ -0.24
SCAMP4-206ENST00000460767 KCTD16Q68DU8 428 aa13.56□□□□□ -0.24
SCAMP4-206ENST00000460767 RFLNAQ6ZTI6 216 aa13.56□□□□□ -0.24
SCAMP4-206ENST00000460767 ZNF765Q7L2R6 523 aa13.56□□□□□ -0.24
SCAMP4-206ENST00000460767 ZNF438Q7Z4V0 828 aa13.56□□□□□ -0.24
SCAMP4-206ENST00000460767 HID1Q8IV36 788 aa13.56□□□□□ -0.24
SCAMP4-206ENST00000460767 C9orf43Q8TAL5 461 aaPredicted RBP13.56□□□□□ -0.24
SCAMP4-206ENST00000460767 MIB2Q96AX9 1013 aa13.56□□□□□ -0.24
SCAMP4-206ENST00000460767 MRGPRX2Q96LB1 330 aa13.56□□□□□ -0.24
SCAMP4-206ENST00000460767 TAAR9Q96RI9 348 aa13.56□□□□□ -0.24
SCAMP4-206ENST00000460767 DDA1Q9BW61 102 aa13.56□□□□□ -0.24
SCAMP4-206ENST00000460767 TEX101Q9BY14 249 aa13.56□□□□□ -0.24
SCAMP4-206ENST00000460767 GBA3Q9H227 469 aa13.56□□□□□ -0.24
SCAMP4-206ENST00000460767 C10orf88Q9H8K7 445 aa13.56□□□□□ -0.24
SCAMP4-206ENST00000460767 LZTFL1Q9NQ48 299 aa13.56□□□□□ -0.24
SCAMP4-206ENST00000460767 TTLL3Q9Y4R7 772 aa13.56□□□□□ -0.24
SCAMP4-206ENST00000460767 ZNF106Q9H2Y7 1883 aaKnown RBP13.56□□□□□ -0.24
SCAMP4-206ENST00000460767 ZFC3H1O60293 1989 aaKnown RBP13.56□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms