RNA–Protein interactions for RNA: ENST00000459727.5

HDAC3-202, Transcript of histone deacetylase 3, humanhuman

TSL 5

Gene HDAC3, Length 524 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-202ENST00000459727 TLL2Q9Y6L7 1015 aa8.79□□□□□ -1
HDAC3-202ENST00000459727 TTC24A2A3L6 582 aaPredicted RBP8.78□□□□□ -1
HDAC3-202ENST00000459727 CCDC160A6NGH7 325 aa8.78□□□□□ -1
HDAC3-202ENST00000459727 CCDC154A6NI56 674 aa8.78□□□□□ -1
HDAC3-202ENST00000459727 SLC38A8A6NNN8 435 aa8.78□□□□□ -1
HDAC3-202ENST00000459727 BTN3A1O00481 513 aa8.78□□□□□ -1
HDAC3-202ENST00000459727 RAD51BO15315 384 aa8.78□□□□□ -1
HDAC3-202ENST00000459727 STX7O15400 261 aaKnown RBP8.78□□□□□ -1
HDAC3-202ENST00000459727 TBC1D4O60343 1298 aa8.78□□□□□ -1
HDAC3-202ENST00000459727 ECI2O75521 394 aa8.78□□□□□ -1
HDAC3-202ENST00000459727 SLC22A3O75751 556 aa8.78□□□□□ -1
HDAC3-202ENST00000459727 ARHGEF15O94989 841 aa8.78□□□□□ -1
HDAC3-202ENST00000459727 PARNO95453 639 aaKnown RBP8.78□□□□□ -1
HDAC3-202ENST00000459727 OTCP00480 354 aa8.78□□□□□ -1
HDAC3-202ENST00000459727 ENO2P09104 434 aaPredicted RBP8.78□□□□□ -1
HDAC3-202ENST00000459727 ALDOCP09972 364 aaKnown RBP8.78□□□□□ -1
HDAC3-202ENST00000459727 CR2P20023 1033 aa8.78□□□□□ -1
HDAC3-202ENST00000459727 RPS3P23396 243 aaKnown RBP eCLIP8.78□□□□□ -1
HDAC3-202ENST00000459727 MYF6P23409 242 aa8.78□□□□□ -1
HDAC3-202ENST00000459727 HTR1EP28566 365 aa8.78□□□□□ -1
HDAC3-202ENST00000459727 GRK4P32298 578 aa8.78□□□□□ -1
HDAC3-202ENST00000459727 GRIA3P42263 894 aa8.78□□□□□ -1
HDAC3-202ENST00000459727 PGFP49763 221 aa8.78□□□□□ -1
HDAC3-202ENST00000459727 PTPN5P54829 565 aa8.78□□□□□ -1
HDAC3-202ENST00000459727 AP1S1P61966 158 aa8.78□□□□□ -1
HDAC3-202ENST00000459727 MYBPC1Q00872 1141 aa8.78□□□□□ -1
HDAC3-202ENST00000459727 CACNG1Q06432 222 aa8.78□□□□□ -1
HDAC3-202ENST00000459727 CACNB2Q08289 660 aaPredicted RBP8.78□□□□□ -1
HDAC3-202ENST00000459727 PRKG2Q13237 762 aa8.78□□□□□ -1
HDAC3-202ENST00000459727 GALNT3Q14435 633 aa8.78□□□□□ -1
HDAC3-202ENST00000459727 PCBP2Q15366 365 aaKnown RBP eCLIP8.78□□□□□ -1
HDAC3-202ENST00000459727 OR4D1Q15615 310 aa8.78□□□□□ -1
HDAC3-202ENST00000459727 FXNQ16595 210 aa8.78□□□□□ -1
HDAC3-202ENST00000459727 NADK2Q4G0N4 442 aa8.78□□□□□ -1
HDAC3-202ENST00000459727 INO80DQ53TQ3 878 aaPredicted RBP8.78□□□□□ -1
HDAC3-202ENST00000459727 HECTD3Q5T447 861 aa8.78□□□□□ -1
HDAC3-202ENST00000459727 C6orf52Q5T4I8 152 aa8.78□□□□□ -1
HDAC3-202ENST00000459727 FUT10Q6P4F1 479 aa8.78□□□□□ -1
HDAC3-202ENST00000459727 RBM44Q6ZP01 1051 aaKnown RBP8.78□□□□□ -1
HDAC3-202ENST00000459727 FRA10AC1Q70Z53 315 aa8.78□□□□□ -1
HDAC3-202ENST00000459727 ZNF280BQ86YH2 543 aa8.78□□□□□ -1
HDAC3-202ENST00000459727 FUNDC1Q8IVP5 155 aa8.78□□□□□ -1
HDAC3-202ENST00000459727 GALNT4Q8N4A0 578 aa8.78□□□□□ -1
HDAC3-202ENST00000459727 TMEM199Q8N511 208 aa8.78□□□□□ -1
HDAC3-202ENST00000459727 DPP10Q8N608 796 aa8.78□□□□□ -1
HDAC3-202ENST00000459727 GLB1L3Q8NCI6 653 aaPredicted RBP8.78□□□□□ -1
HDAC3-202ENST00000459727 TRPV3Q8NET8 790 aa8.78□□□□□ -1
HDAC3-202ENST00000459727 LRTOMTQ8WZ04 291 aa8.78□□□□□ -1
HDAC3-202ENST00000459727 EXT2Q93063 718 aa8.78□□□□□ -1
HDAC3-202ENST00000459727 FUBP1Q96AE4 644 aaKnown RBP8.78□□□□□ -1
HDAC3-202ENST00000459727 MAGEB10Q96LZ2 347 aaPredicted RBP8.78□□□□□ -1
HDAC3-202ENST00000459727 PPP3R2Q96LZ3 170 aa8.78□□□□□ -1
HDAC3-202ENST00000459727 RDH12Q96NR8 316 aa8.78□□□□□ -1
HDAC3-202ENST00000459727 BIRC8Q96P09 236 aa8.78□□□□□ -1
HDAC3-202ENST00000459727 ZBTB18Q99592 522 aa8.78□□□□□ -1
HDAC3-202ENST00000459727 KCTD14Q9BQ13 255 aaPredicted RBP8.78□□□□□ -1
HDAC3-202ENST00000459727 HGH1Q9BTY7 390 aa8.78□□□□□ -1
HDAC3-202ENST00000459727 BDH2Q9BUT1 245 aa8.78□□□□□ -1
HDAC3-202ENST00000459727 LRRC3Q9BY71 257 aa8.78□□□□□ -1
HDAC3-202ENST00000459727 RBM38Q9H0Z9 239 aaKnown RBP8.78□□□□□ -1
HDAC3-202ENST00000459727 ALG2Q9H553 416 aa8.78□□□□□ -1
HDAC3-202ENST00000459727 COQ10BQ9H8M1 238 aa8.78□□□□□ -1
HDAC3-202ENST00000459727 PIDD1Q9HB75 910 aa8.78□□□□□ -1
HDAC3-202ENST00000459727 HEBP1Q9NRV9 189 aa8.78□□□□□ -1
HDAC3-202ENST00000459727 AGPAT4Q9NRZ5 378 aa8.78□□□□□ -1
HDAC3-202ENST00000459727 UBAP1Q9NZ09 502 aa8.78□□□□□ -1
HDAC3-202ENST00000459727 KLHL42Q9P2K6 505 aa8.78□□□□□ -1
HDAC3-202ENST00000459727 RSL24D1Q9UHA3 163 aaKnown RBP8.78□□□□□ -1
HDAC3-202ENST00000459727 ANAPC2Q9UJX6 822 aa8.78□□□□□ -1
HDAC3-202ENST00000459727 PCTPQ9UKL6 214 aa8.78□□□□□ -1
HDAC3-202ENST00000459727 PACSIN3Q9UKS6 424 aa8.78□□□□□ -1
HDAC3-202ENST00000459727 LRFN2Q9ULH4 789 aa8.78□□□□□ -1
HDAC3-202ENST00000459727 MAFFQ9ULX9 164 aa8.78□□□□□ -1
HDAC3-202ENST00000459727 GPR45Q9Y5Y3 372 aa8.78□□□□□ -1
HDAC3-202ENST00000459727 BACE2Q9Y5Z0 518 aa8.78□□□□□ -1
HDAC3-202ENST00000459727 AK5Q9Y6K8 562 aa8.78□□□□□ -1
HDAC3-202ENST00000459727 TRIP12Q14669 1992 aaPredicted RBP8.78□□□□□ -1
HDAC3-202ENST00000459727 ZNF638Q14966 1978 aaKnown RBP8.78□□□□□ -1
HDAC3-202ENST00000459727 FRMPD3Q5JV73 1810 aa8.77□□□□□ -1
HDAC3-202ENST00000459727 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP8.77□□□□□ -1.01
HDAC3-202ENST00000459727 OR51F1A6NGY5 319 aa8.77□□□□□ -1.01
HDAC3-202ENST00000459727 ZNF839A8K0R7 811 aa8.77□□□□□ -1.01
HDAC3-202ENST00000459727 H0YAE9 185 aa8.77□□□□□ -1.01
HDAC3-202ENST00000459727 EIF3FO00303 357 aaPredicted RBP8.77□□□□□ -1.01
HDAC3-202ENST00000459727 ARNTLO00327 626 aa8.77□□□□□ -1.01
HDAC3-202ENST00000459727 NME4O00746 187 aa8.77□□□□□ -1.01
HDAC3-202ENST00000459727 HTRA2O43464 458 aaPredicted RBP8.77□□□□□ -1.01
HDAC3-202ENST00000459727 KATNA1O75449 491 aa8.77□□□□□ -1.01
HDAC3-202ENST00000459727 WDR47O94967 919 aa8.77□□□□□ -1.01
HDAC3-202ENST00000459727 UPP2O95045 317 aa8.77□□□□□ -1.01
HDAC3-202ENST00000459727 RASAL1O95294 804 aa8.77□□□□□ -1.01
HDAC3-202ENST00000459727 PGM3O95394 542 aa8.77□□□□□ -1.01
HDAC3-202ENST00000459727 LDLRP01130 860 aa8.77□□□□□ -1.01
HDAC3-202ENST00000459727 PRKAR2AP13861 404 aaKnown RBP8.77□□□□□ -1.01
HDAC3-202ENST00000459727 SELPP16109 830 aa8.77□□□□□ -1.01
HDAC3-202ENST00000459727 ZNF7P17097 686 aaPredicted RBP8.77□□□□□ -1.01
HDAC3-202ENST00000459727 CAPN3P20807 821 aa8.77□□□□□ -1.01
HDAC3-202ENST00000459727 SLC6A2P23975 617 aa8.77□□□□□ -1.01
HDAC3-202ENST00000459727 FMO4P31512 558 aa8.77□□□□□ -1.01
HDAC3-202ENST00000459727 ACVRL1P37023 503 aa8.77□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 62.5 ms