RNA–Protein interactions for RNA: ENST00000454859.7

ECHDC1-210, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene ECHDC1, Length 2,341 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-210ENST00000454859 CAB39LQ9H9S4 337 aa6.78□□□□□ -1.32
ECHDC1-210ENST00000454859 SLCO1B3Q9NPD5 702 aa6.78□□□□□ -1.32
ECHDC1-210ENST00000454859 HPS4Q9NQG7 708 aa6.78□□□□□ -1.32
ECHDC1-210ENST00000454859 SPATS2LQ9NUQ6 558 aaKnown RBP6.78□□□□□ -1.32
ECHDC1-210ENST00000454859 NUDT4Q9NZJ9 180 aa6.78□□□□□ -1.32
ECHDC1-210ENST00000454859 SLC17A6Q9P2U8 582 aa6.78□□□□□ -1.32
ECHDC1-210ENST00000454859 XPR1Q9UBH6 696 aa6.78□□□□□ -1.32
ECHDC1-210ENST00000454859 PPM1HQ9ULR3 514 aa6.78□□□□□ -1.32
ECHDC1-210ENST00000454859 RRP15Q9Y3B9 282 aaKnown RBP6.78□□□□□ -1.32
ECHDC1-210ENST00000454859 TTC24A2A3L6 582 aaPredicted RBP6.78□□□□□ -1.32
ECHDC1-210ENST00000454859 E5RI56 91 aa6.78□□□□□ -1.32
ECHDC1-210ENST00000454859 GOLGA8TH3BQL2 631 aa6.78□□□□□ -1.32
ECHDC1-210ENST00000454859 GAPDHSO14556 408 aaPredicted RBP6.78□□□□□ -1.32
ECHDC1-210ENST00000454859 PHGDHO43175 533 aaKnown RBP6.78□□□□□ -1.32
ECHDC1-210ENST00000454859 DLX3O60479 287 aa6.78□□□□□ -1.32
ECHDC1-210ENST00000454859 RNASEH1O60930 286 aaKnown RBP6.78□□□□□ -1.32
ECHDC1-210ENST00000454859 ADH1BP00325 375 aa6.78□□□□□ -1.32
ECHDC1-210ENST00000454859 FTH1P02794 183 aa6.78□□□□□ -1.32
ECHDC1-210ENST00000454859 TIMP2P16035 220 aa6.78□□□□□ -1.32
ECHDC1-210ENST00000454859 MMP12P39900 470 aa6.78□□□□□ -1.32
ECHDC1-210ENST00000454859 CTSOP43234 321 aaPredicted RBP6.78□□□□□ -1.32
ECHDC1-210ENST00000454859 NUMBP49757 651 aa6.78□□□□□ -1.32
ECHDC1-210ENST00000454859 COPAP53621 1224 aa6.78□□□□□ -1.32
ECHDC1-210ENST00000454859 ALDH18A1P54886 795 aaKnown RBP6.78□□□□□ -1.32
ECHDC1-210ENST00000454859 CDKN2DP55273 166 aa6.78□□□□□ -1.32
ECHDC1-210ENST00000454859 PTSQ03393 145 aa6.78□□□□□ -1.32
ECHDC1-210ENST00000454859 ZBTB16Q05516 673 aa6.78□□□□□ -1.32
ECHDC1-210ENST00000454859 ZNF33BQ06732 778 aa6.78□□□□□ -1.32
ECHDC1-210ENST00000454859 ZNF284Q2VY69 593 aa6.78□□□□□ -1.32
ECHDC1-210ENST00000454859 RBM20Q5T481 1227 aaKnown RBP6.78□□□□□ -1.32
ECHDC1-210ENST00000454859 ZNF697Q5TEC3 545 aa6.78□□□□□ -1.32
ECHDC1-210ENST00000454859 LRRC66Q68CR7 880 aa6.78□□□□□ -1.32
ECHDC1-210ENST00000454859 TMEM215Q68D42 235 aa6.78□□□□□ -1.32
ECHDC1-210ENST00000454859 PTRHD1Q6GMV3 140 aaKnown RBP6.78□□□□□ -1.32
ECHDC1-210ENST00000454859 GET4Q7L5D6 327 aaPredicted RBP6.78□□□□□ -1.32
ECHDC1-210ENST00000454859 SERPINA9Q86WD7 417 aa6.78□□□□□ -1.32
ECHDC1-210ENST00000454859 PARP9Q8IXQ6 854 aa6.78□□□□□ -1.32
ECHDC1-210ENST00000454859 DDHD1Q8NEL9 900 aa6.78□□□□□ -1.32
ECHDC1-210ENST00000454859 ASB12Q8WXK4 309 aa6.78□□□□□ -1.32
ECHDC1-210ENST00000454859 PPM1EQ8WY54 764 aa6.78□□□□□ -1.32
ECHDC1-210ENST00000454859 SUSD6Q92537 303 aa6.78□□□□□ -1.32
ECHDC1-210ENST00000454859 RSPRY1Q96DX4 576 aa6.78□□□□□ -1.32
ECHDC1-210ENST00000454859 KLHL32Q96NJ5 620 aa6.78□□□□□ -1.32
ECHDC1-210ENST00000454859 COPS8Q99627 209 aa6.78□□□□□ -1.32
ECHDC1-210ENST00000454859 GATA5Q9BWX5 397 aaPredicted RBP6.78□□□□□ -1.32
ECHDC1-210ENST00000454859 NUSAP1Q9BXS6 441 aaKnown RBP6.78□□□□□ -1.32
ECHDC1-210ENST00000454859 TNKS2Q9H2K2 1166 aa6.78□□□□□ -1.32
ECHDC1-210ENST00000454859 PRO3102Q9H379 93 aa6.78□□□□□ -1.32
ECHDC1-210ENST00000454859 FAM83DQ9H4H8 585 aa6.78□□□□□ -1.32
ECHDC1-210ENST00000454859 KCNK13Q9HB14 408 aa6.78□□□□□ -1.32
ECHDC1-210ENST00000454859 NPHS2Q9NP85 383 aa6.78□□□□□ -1.32
ECHDC1-210ENST00000454859 DYRK4Q9NR20 520 aa6.78□□□□□ -1.32
ECHDC1-210ENST00000454859 IL1RAPL1Q9NZN1 696 aa6.78□□□□□ -1.32
ECHDC1-210ENST00000454859 SLCO3A1Q9UIG8 710 aa6.78□□□□□ -1.32
ECHDC1-210ENST00000454859 CRLS1Q9UJA2 301 aa6.78□□□□□ -1.32
ECHDC1-210ENST00000454859 ACTL7AQ9Y615 435 aa6.78□□□□□ -1.32
ECHDC1-210ENST00000454859 DNMT3AQ9Y6K1 912 aaPredicted RBP6.78□□□□□ -1.32
ECHDC1-210ENST00000454859 COL4A2P08572 1712 aa6.77□□□□□ -1.33
ECHDC1-210ENST00000454859 UBA6A0AVT1 1052 aaPredicted RBP6.77□□□□□ -1.33
ECHDC1-210ENST00000454859 WDR91A4D1P6 747 aa6.77□□□□□ -1.33
ECHDC1-210ENST00000454859 NPIPB15A6NHN6 443 aaPredicted RBP6.77□□□□□ -1.33
ECHDC1-210ENST00000454859 C16orf96A6NNT2 1141 aa6.77□□□□□ -1.33
ECHDC1-210ENST00000454859 MATN2O00339 956 aa6.77□□□□□ -1.33
ECHDC1-210ENST00000454859 AURKAO14965 403 aa6.77□□□□□ -1.33
ECHDC1-210ENST00000454859 TSPAN6O43657 245 aa6.77□□□□□ -1.33
ECHDC1-210ENST00000454859 GJB3O75712 270 aa6.77□□□□□ -1.33
ECHDC1-210ENST00000454859 UNC5CO95185 931 aa6.77□□□□□ -1.33
ECHDC1-210ENST00000454859 PIGNO95427 931 aa6.77□□□□□ -1.33
ECHDC1-210ENST00000454859 UGT2B4P06133 528 aa6.77□□□□□ -1.33
ECHDC1-210ENST00000454859 C8GP07360 202 aa6.77□□□□□ -1.33
ECHDC1-210ENST00000454859 SBK3P0C264 359 aa6.77□□□□□ -1.33
ECHDC1-210ENST00000454859 TFEBP19484 476 aa6.77□□□□□ -1.33
ECHDC1-210ENST00000454859 CALB2P22676 271 aa6.77□□□□□ -1.33
ECHDC1-210ENST00000454859 MRPL19P49406 292 aaKnown RBP6.77□□□□□ -1.33
ECHDC1-210ENST00000454859 STK19P49842 368 aaPredicted RBP6.77□□□□□ -1.33
ECHDC1-210ENST00000454859 CLCN7P51798 805 aa6.77□□□□□ -1.33
ECHDC1-210ENST00000454859 INHBCP55103 352 aa6.77□□□□□ -1.33
ECHDC1-210ENST00000454859 PKNOX1P55347 436 aa6.77□□□□□ -1.33
ECHDC1-210ENST00000454859 TIAL1Q01085 375 aaKnown RBP eCLIP6.77□□□□□ -1.33
ECHDC1-210ENST00000454859 CSHL1Q14406 222 aa6.77□□□□□ -1.33
ECHDC1-210ENST00000454859 GBX1Q14549 363 aa6.77□□□□□ -1.33
ECHDC1-210ENST00000454859 SEMA3AQ14563 771 aa6.77□□□□□ -1.33
ECHDC1-210ENST00000454859 CBX2Q14781 532 aaPredicted RBP6.77□□□□□ -1.33
ECHDC1-210ENST00000454859 SMU1Q2TAY7 513 aa6.77□□□□□ -1.33
ECHDC1-210ENST00000454859 FNDC3BQ53EP0 1204 aaKnown RBP6.77□□□□□ -1.33
ECHDC1-210ENST00000454859 C9orf64Q5T6V5 341 aa6.77□□□□□ -1.33
ECHDC1-210ENST00000454859 C16orf46Q6P387 395 aa6.77□□□□□ -1.33
ECHDC1-210ENST00000454859 FRMD7Q6ZUT3 714 aa6.77□□□□□ -1.33
ECHDC1-210ENST00000454859 Q6ZVU0 165 aa6.77□□□□□ -1.33
ECHDC1-210ENST00000454859 TAS2R42Q7RTR8 314 aa6.77□□□□□ -1.33
ECHDC1-210ENST00000454859 RALGPS2Q86X27 583 aaPredicted RBP6.77□□□□□ -1.33
ECHDC1-210ENST00000454859 PHC3Q8NDX5 983 aa6.77□□□□□ -1.33
ECHDC1-210ENST00000454859 ACTRT2Q8TDY3 377 aa6.77□□□□□ -1.33
ECHDC1-210ENST00000454859 UBTD2Q8WUN7 234 aa6.77□□□□□ -1.33
ECHDC1-210ENST00000454859 FAM131CQ96AQ9 280 aa6.77□□□□□ -1.33
ECHDC1-210ENST00000454859 DCUN1D1Q96GG9 259 aa6.77□□□□□ -1.33
ECHDC1-210ENST00000454859 LRRC3BQ96PB8 259 aa6.77□□□□□ -1.33
ECHDC1-210ENST00000454859 ATOH8Q96SQ7 321 aa6.77□□□□□ -1.33
ECHDC1-210ENST00000454859 SORT1Q99523 831 aa6.77□□□□□ -1.33
ECHDC1-210ENST00000454859 TMEM120AQ9BXJ8 343 aa6.77□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms