RNA–Protein interactions for RNA: ENST00000454240.1

SMARCC1-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

TSL 3

Gene SMARCC1, Length 636 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-203ENST00000454240 MCUQ8NE86 351 aa27.72■■■□□ 2.03
SMARCC1-203ENST00000454240 CDKN2AIPNLQ96HQ2 116 aa27.72■■■□□ 2.03
SMARCC1-203ENST00000454240 ARFGAP3Q9NP61 516 aa27.72■■■□□ 2.03
SMARCC1-203ENST00000454240 SMOXQ9NWM0 555 aa27.72■■■□□ 2.03
SMARCC1-203ENST00000454240 TRNAU1APQ9NX07 287 aaKnown RBP27.72■■■□□ 2.03
SMARCC1-203ENST00000454240 ATXN10Q9UBB4 475 aa27.72■■■□□ 2.03
SMARCC1-203ENST00000454240 CDC23Q9UJX2 597 aa27.72■■■□□ 2.03
SMARCC1-203ENST00000454240 RIMKLBQ9ULI2 386 aa27.72■■■□□ 2.03
SMARCC1-203ENST00000454240 AGAP14A8MT82 685 aa27.71■■■□□ 2.03
SMARCC1-203ENST00000454240 FFAR2O15552 330 aa27.71■■■□□ 2.03
SMARCC1-203ENST00000454240 GPR39O43194 453 aa27.71■■■□□ 2.03
SMARCC1-203ENST00000454240 TMEM63AO94886 807 aa27.71■■■□□ 2.03
SMARCC1-203ENST00000454240 ADCY8P40145 1251 aa27.71■■■□□ 2.03
SMARCC1-203ENST00000454240 GNPDA1P46926 289 aa27.71■■■□□ 2.03
SMARCC1-203ENST00000454240 SESN2P58004 480 aaPredicted RBP27.71■■■□□ 2.03
SMARCC1-203ENST00000454240 DHX34Q14147 1143 aaKnown RBP27.71■■■□□ 2.03
SMARCC1-203ENST00000454240 TRIP6Q15654 476 aaKnown RBP27.71■■■□□ 2.03
SMARCC1-203ENST00000454240 SKIDA1Q1XH10 827 aa27.71■■■□□ 2.03
SMARCC1-203ENST00000454240 PYCR3Q53H96 274 aa27.71■■■□□ 2.03
SMARCC1-203ENST00000454240 ZNF648Q5T619 568 aaPredicted RBP27.71■■■□□ 2.03
SMARCC1-203ENST00000454240 PSAPL1Q6NUJ1 521 aa27.71■■■□□ 2.03
SMARCC1-203ENST00000454240 ZNF572Q7Z3I7 529 aaPredicted RBP27.71■■■□□ 2.03
SMARCC1-203ENST00000454240 ADGRG6Q86SQ4 1221 aa27.71■■■□□ 2.03
SMARCC1-203ENST00000454240 GLRX5Q86SX6 157 aa27.71■■■□□ 2.03
SMARCC1-203ENST00000454240 JAMLQ86YT9 394 aa27.71■■■□□ 2.03
SMARCC1-203ENST00000454240 KRT12Q99456 494 aa27.71■■■□□ 2.03
SMARCC1-203ENST00000454240 DUSP23Q9BVJ7 150 aa27.71■■■□□ 2.03
SMARCC1-203ENST00000454240 IL22Q9GZX6 179 aa27.71■■■□□ 2.03
SMARCC1-203ENST00000454240 RMI1Q9H9A7 625 aa27.71■■■□□ 2.03
SMARCC1-203ENST00000454240 BFARQ9NZS9 450 aa27.71■■■□□ 2.03
SMARCC1-203ENST00000454240 ASIC3Q9UHC3 531 aa27.71■■■□□ 2.03
SMARCC1-203ENST00000454240 TCAF1Q9Y4C2 921 aa27.71■■■□□ 2.03
SMARCC1-203ENST00000454240 CCL22O00626 93 aa27.7■■■□□ 2.02
SMARCC1-203ENST00000454240 YY2O15391 372 aa27.7■■■□□ 2.02
SMARCC1-203ENST00000454240 NUAK1O60285 661 aa27.7■■■□□ 2.02
SMARCC1-203ENST00000454240 ALPPL2P10696 532 aa27.7■■■□□ 2.02
SMARCC1-203ENST00000454240 IVDP26440 423 aa27.7■■■□□ 2.02
SMARCC1-203ENST00000454240 NFATC2Q13469 925 aa27.7■■■□□ 2.02
SMARCC1-203ENST00000454240 KHDC1Q4VXA5 237 aaKnown RBP27.7■■■□□ 2.02
SMARCC1-203ENST00000454240 PCID2Q5JVF3 399 aa27.7■■■□□ 2.02
SMARCC1-203ENST00000454240 TSTD2Q5T7W7 516 aa27.7■■■□□ 2.02
SMARCC1-203ENST00000454240 LVRNQ6Q4G3 990 aa27.7■■■□□ 2.02
SMARCC1-203ENST00000454240 MARK2Q7KZI7 788 aaKnown RBP27.7■■■□□ 2.02
SMARCC1-203ENST00000454240 NLRP9Q7RTR0 991 aa27.7■■■□□ 2.02
SMARCC1-203ENST00000454240 CAND1Q86VP6 1230 aaKnown RBP27.7■■■□□ 2.02
SMARCC1-203ENST00000454240 ASB8Q9H765 288 aa27.7■■■□□ 2.02
SMARCC1-203ENST00000454240 PCYT1BQ9Y5K3 369 aaPredicted RBP27.7■■■□□ 2.02
SMARCC1-203ENST00000454240 GPR89AB7ZAQ6 455 aa27.69■■■□□ 2.02
SMARCC1-203ENST00000454240 DNALI1O14645 258 aaPredicted RBP27.69■■■□□ 2.02
SMARCC1-203ENST00000454240 TTI1O43156 1089 aa27.69■■■□□ 2.02
SMARCC1-203ENST00000454240 SIGLEC6O43699 453 aa27.69■■■□□ 2.02
SMARCC1-203ENST00000454240 VEGFDO43915 354 aa27.69■■■□□ 2.02
SMARCC1-203ENST00000454240 URI1O94763 535 aaPredicted RBP27.69■■■□□ 2.02
SMARCC1-203ENST00000454240 LDOC1O95751 146 aaPredicted RBP27.69■■■□□ 2.02
SMARCC1-203ENST00000454240 GPR89BP0CG08 455 aa27.69■■■□□ 2.02
SMARCC1-203ENST00000454240 MLNP12872 115 aa27.69■■■□□ 2.02
SMARCC1-203ENST00000454240 ZNF8P17098 575 aaPredicted RBP27.69■■■□□ 2.02
SMARCC1-203ENST00000454240 DEFB133Q30KQ1 61 aa27.69■■■□□ 2.02
SMARCC1-203ENST00000454240 RNASEH2BQ5TBB1 312 aaKnown RBP27.69■■■□□ 2.02
SMARCC1-203ENST00000454240 GKN2Q86XP6 184 aa27.69■■■□□ 2.02
SMARCC1-203ENST00000454240 PPIL6Q8IXY8 311 aa27.69■■■□□ 2.02
SMARCC1-203ENST00000454240 FAM181AQ8N9Y4 354 aa27.69■■■□□ 2.02
SMARCC1-203ENST00000454240 DDHD1Q8NEL9 900 aa27.69■■■□□ 2.02
SMARCC1-203ENST00000454240 OR13J1Q8NGT2 312 aa27.69■■■□□ 2.02
SMARCC1-203ENST00000454240 CCL4L1Q8NHW4 92 aa27.69■■■□□ 2.02
SMARCC1-203ENST00000454240 GPBAR1Q8TDU6 330 aa27.69■■■□□ 2.02
SMARCC1-203ENST00000454240 ZNF592Q92610 1267 aa27.69■■■□□ 2.02
SMARCC1-203ENST00000454240 PEX13Q92968 403 aa27.69■■■□□ 2.02
SMARCC1-203ENST00000454240 ZNF778Q96MU6 729 aa27.69■■■□□ 2.02
SMARCC1-203ENST00000454240 OR2AG1Q9H205 316 aa27.69■■■□□ 2.02
SMARCC1-203ENST00000454240 FTSJ1Q9UET6 329 aa27.69■■■□□ 2.02
SMARCC1-203ENST00000454240 ARHGEF17Q96PE2 2063 aaPredicted RBP27.69■■■□□ 2.02
SMARCC1-203ENST00000454240 CCDC78A2IDD5 438 aa27.68■■■□□ 2.02
SMARCC1-203ENST00000454240 TNFSF14O43557 240 aa27.68■■■□□ 2.02
SMARCC1-203ENST00000454240 MTX2O75431 263 aa27.68■■■□□ 2.02
SMARCC1-203ENST00000454240 ANXA6P08133 673 aa27.68■■■□□ 2.02
SMARCC1-203ENST00000454240 MGAT1P26572 445 aa27.68■■■□□ 2.02
SMARCC1-203ENST00000454240 MC4RP32245 332 aa27.68■■■□□ 2.02
SMARCC1-203ENST00000454240 ARSDP51689 593 aa27.68■■■□□ 2.02
SMARCC1-203ENST00000454240 ACVR1Q04771 509 aa27.68■■■□□ 2.02
SMARCC1-203ENST00000454240 TMEM115Q12893 351 aaPredicted RBP27.68■■■□□ 2.02
SMARCC1-203ENST00000454240 TCEA2Q15560 299 aa27.68■■■□□ 2.02
SMARCC1-203ENST00000454240 PROX2Q3B8N5 592 aa27.68■■■□□ 2.02
SMARCC1-203ENST00000454240 PPM1JQ5JR12 505 aa27.68■■■□□ 2.02
SMARCC1-203ENST00000454240 LDLRAP1Q5SW96 308 aa27.68■■■□□ 2.02
SMARCC1-203ENST00000454240 GPRC6AQ5T6X5 926 aa27.68■■■□□ 2.02
SMARCC1-203ENST00000454240 DGLUCYQ7Z3D6 616 aa27.68■■■□□ 2.02
SMARCC1-203ENST00000454240 SNX20Q7Z614 316 aa27.68■■■□□ 2.02
SMARCC1-203ENST00000454240 NRROSQ86YC3 692 aa27.68■■■□□ 2.02
SMARCC1-203ENST00000454240 GALNT13Q8IUC8 556 aa27.68■■■□□ 2.02
SMARCC1-203ENST00000454240 PPHLN1Q8NEY8 458 aaKnown RBP27.68■■■□□ 2.02
SMARCC1-203ENST00000454240 CNDP2Q96KP4 475 aaKnown RBP27.68■■■□□ 2.02
SMARCC1-203ENST00000454240 OR2M4Q96R27 311 aa27.68■■■□□ 2.02
SMARCC1-203ENST00000454240 SUDS3Q9H7L9 328 aaPredicted RBP27.68■■■□□ 2.02
SMARCC1-203ENST00000454240 CHRAC1Q9NRG0 131 aa27.68■■■□□ 2.02
SMARCC1-203ENST00000454240 GPSM3Q9Y4H4 160 aa27.68■■■□□ 2.02
SMARCC1-203ENST00000454240 ST14Q9Y5Y6 855 aa27.68■■■□□ 2.02
SMARCC1-203ENST00000454240 CHUKO15111 745 aa27.67■■■□□ 2.02
SMARCC1-203ENST00000454240 AVILO75366 819 aa27.67■■■□□ 2.02
SMARCC1-203ENST00000454240 CRADDP78560 199 aa27.67■■■□□ 2.02
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms