RNA–Protein interactions for RNA: ENST00000444440.1

SF3A1-203, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 5

Gene SF3A1, Length 777 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-203ENST00000444440 PMEPA1Q969W9 287 aa10.77□□□□□ -0.69
SF3A1-203ENST00000444440 GRAMD1AQ96CP6 724 aa10.77□□□□□ -0.69
SF3A1-203ENST00000444440 FCRL3Q96P31 734 aaPredicted RBP10.77□□□□□ -0.69
SF3A1-203ENST00000444440 BAG1Q99933 345 aaPredicted RBP10.77□□□□□ -0.69
SF3A1-203ENST00000444440 ADGRE3Q9BY15 652 aa10.77□□□□□ -0.69
SF3A1-203ENST00000444440 MAGEE1Q9HCI5 957 aa10.77□□□□□ -0.69
SF3A1-203ENST00000444440 TMEM9Q9P0T7 183 aa10.77□□□□□ -0.69
SF3A1-203ENST00000444440 VPS18Q9P253 973 aa10.77□□□□□ -0.69
SF3A1-203ENST00000444440 TBC1D29Q9UFV1 150 aa10.77□□□□□ -0.69
SF3A1-203ENST00000444440 ZNHIT2Q9UHR6 403 aa10.77□□□□□ -0.69
SF3A1-203ENST00000444440 KCNK6Q9Y257 313 aa10.77□□□□□ -0.69
SF3A1-203ENST00000444440 SSUH2Q9Y2M2 353 aa10.77□□□□□ -0.69
SF3A1-203ENST00000444440 SNRNP200O75643 2136 aaKnown RBP10.76□□□□□ -0.69
SF3A1-203ENST00000444440 LOC285095A0A1B0GVY8 99 aa10.76□□□□□ -0.69
SF3A1-203ENST00000444440 GAPDHSO14556 408 aaPredicted RBP10.76□□□□□ -0.69
SF3A1-203ENST00000444440 PLD2O14939 933 aa10.76□□□□□ -0.69
SF3A1-203ENST00000444440 ITGA2BP08514 1039 aa10.76□□□□□ -0.69
SF3A1-203ENST00000444440 ACP5P13686 325 aa10.76□□□□□ -0.69
SF3A1-203ENST00000444440 RBL1P28749 1068 aa10.76□□□□□ -0.69
SF3A1-203ENST00000444440 ALDH4A1P30038 563 aa10.76□□□□□ -0.69
SF3A1-203ENST00000444440 SLC5A2P31639 672 aa10.76□□□□□ -0.69
SF3A1-203ENST00000444440 ARSDP51689 593 aa10.76□□□□□ -0.69
SF3A1-203ENST00000444440 NAP1L1P55209 391 aaKnown RBP10.76□□□□□ -0.69
SF3A1-203ENST00000444440 DCDC1P59894 354 aa10.76□□□□□ -0.69
SF3A1-203ENST00000444440 CLN3Q13286 438 aa10.76□□□□□ -0.69
SF3A1-203ENST00000444440 PTPRCAPQ14761 206 aa10.76□□□□□ -0.69
SF3A1-203ENST00000444440 PLA2G4EQ3MJ16 856 aa10.76□□□□□ -0.69
SF3A1-203ENST00000444440 AMZ1Q400G9 498 aa10.76□□□□□ -0.69
SF3A1-203ENST00000444440 USP53Q70EK8 1073 aa10.76□□□□□ -0.69
SF3A1-203ENST00000444440 ADGRG6Q86SQ4 1221 aa10.76□□□□□ -0.69
SF3A1-203ENST00000444440 FBXO39Q8N4B4 442 aa10.76□□□□□ -0.69
SF3A1-203ENST00000444440 SLC25A41Q8N5S1 370 aa10.76□□□□□ -0.69
SF3A1-203ENST00000444440 SPC24Q8NBT2 197 aa10.76□□□□□ -0.69
SF3A1-203ENST00000444440 RCBTB1Q8NDN9 531 aa10.76□□□□□ -0.69
SF3A1-203ENST00000444440 CCHCR1Q8TD31 782 aa10.76□□□□□ -0.69
SF3A1-203ENST00000444440 KCNE4Q8WWG9 221 aa10.76□□□□□ -0.69
SF3A1-203ENST00000444440 HTR3CQ8WXA8 447 aa10.76□□□□□ -0.69
SF3A1-203ENST00000444440 FCRL5Q96RD9 977 aa10.76□□□□□ -0.69
SF3A1-203ENST00000444440 DESI2Q9BSY9 194 aa10.76□□□□□ -0.69
SF3A1-203ENST00000444440 SPATA16Q9BXB7 569 aa10.76□□□□□ -0.69
SF3A1-203ENST00000444440 OR2AG1Q9H205 316 aa10.76□□□□□ -0.69
SF3A1-203ENST00000444440 THSD1Q9NS62 852 aa10.76□□□□□ -0.69
SF3A1-203ENST00000444440 KLHL8Q9P2G9 620 aaPredicted RBP10.76□□□□□ -0.69
SF3A1-203ENST00000444440 NFKBIL1Q9UBC1 381 aaPredicted RBP10.76□□□□□ -0.69
SF3A1-203ENST00000444440 SLC23A2Q9UGH3 650 aa10.76□□□□□ -0.69
SF3A1-203ENST00000444440 FAM153AQ9UHL3 310 aa10.76□□□□□ -0.69
SF3A1-203ENST00000444440 PACSIN2Q9UNF0 486 aaPredicted RBP10.76□□□□□ -0.69
SF3A1-203ENST00000444440 SBDSQ9Y3A5 250 aaKnown RBP eCLIP10.76□□□□□ -0.69
SF3A1-203ENST00000444440 LOXL2Q9Y4K0 774 aa10.76□□□□□ -0.69
SF3A1-203ENST00000444440 PCDHA3Q9Y5H8 950 aa10.76□□□□□ -0.69
SF3A1-203ENST00000444440 IGHV1OR21-1A0A087WYE8 117 aa10.75□□□□□ -0.69
SF3A1-203ENST00000444440 IGHV5-10-1A0A0J9YXX1 117 aa10.75□□□□□ -0.69
SF3A1-203ENST00000444440 RGSL1A5PLK6 1076 aa10.75□□□□□ -0.69
SF3A1-203ENST00000444440 PRR19A6NJB7 356 aa10.75□□□□□ -0.69
SF3A1-203ENST00000444440 RHPN2P1A8MT19 583 aa10.75□□□□□ -0.69
SF3A1-203ENST00000444440 BTNL10A8MVZ5 291 aa10.75□□□□□ -0.69
SF3A1-203ENST00000444440 C9orf172C9J069 976 aa10.75□□□□□ -0.69
SF3A1-203ENST00000444440 APOC4-APOC2K7ER74 178 aa10.75□□□□□ -0.69
SF3A1-203ENST00000444440 PJA2O43164 708 aa10.75□□□□□ -0.69
SF3A1-203ENST00000444440 KLK10O43240 276 aa10.75□□□□□ -0.69
SF3A1-203ENST00000444440 GRID2O43424 1007 aa10.75□□□□□ -0.69
SF3A1-203ENST00000444440 BUD23O43709 281 aaKnown RBP10.75□□□□□ -0.69
SF3A1-203ENST00000444440 NUAK1O60285 661 aa10.75□□□□□ -0.69
SF3A1-203ENST00000444440 APOC2P02655 101 aa10.75□□□□□ -0.69
SF3A1-203ENST00000444440 PRB1P04280 392 aa10.75□□□□□ -0.69
SF3A1-203ENST00000444440 PYGLP06737 847 aa10.75□□□□□ -0.69
SF3A1-203ENST00000444440 CCL4P13236 92 aa10.75□□□□□ -0.69
SF3A1-203ENST00000444440 MPSTP25325 297 aa10.75□□□□□ -0.69
SF3A1-203ENST00000444440 CTNNA2P26232 953 aa10.75□□□□□ -0.69
SF3A1-203ENST00000444440 RBMS1P29558 406 aaKnown RBP10.75□□□□□ -0.69
SF3A1-203ENST00000444440 VAV2P52735 878 aa10.75□□□□□ -0.69
SF3A1-203ENST00000444440 CXADRP78310 365 aa10.75□□□□□ -0.69
SF3A1-203ENST00000444440 OTUD4Q01804 1114 aaKnown RBP10.75□□□□□ -0.69
SF3A1-203ENST00000444440 TGIF1Q15583 401 aa10.75□□□□□ -0.69
SF3A1-203ENST00000444440 MAP9Q49MG5 647 aa10.75□□□□□ -0.69
SF3A1-203ENST00000444440 ATP13A5Q4VNC0 1218 aa10.75□□□□□ -0.69
SF3A1-203ENST00000444440 ZNF569Q5MCW4 686 aa10.75□□□□□ -0.69
SF3A1-203ENST00000444440 CHCHD2P9Q5T1J5 151 aaPredicted RBP10.75□□□□□ -0.69
SF3A1-203ENST00000444440 PHF19Q5T6S3 580 aa10.75□□□□□ -0.69
SF3A1-203ENST00000444440 CRTC3Q6UUV7 619 aa10.75□□□□□ -0.69
SF3A1-203ENST00000444440 PID1Q7Z2X4 250 aa10.75□□□□□ -0.69
SF3A1-203ENST00000444440 KIAA1328Q86T90 577 aa10.75□□□□□ -0.69
SF3A1-203ENST00000444440 ZNF547Q8IVP9 402 aa10.75□□□□□ -0.69
SF3A1-203ENST00000444440 SFRP1Q8N474 314 aa10.75□□□□□ -0.69
SF3A1-203ENST00000444440 TRAM1L1Q8N609 369 aa10.75□□□□□ -0.69
SF3A1-203ENST00000444440 ACTL9Q8TC94 416 aa10.75□□□□□ -0.69
SF3A1-203ENST00000444440 GLYATL1Q969I3 302 aa10.75□□□□□ -0.69
SF3A1-203ENST00000444440 RBM41Q96IZ5 413 aaKnown RBP10.75□□□□□ -0.69
SF3A1-203ENST00000444440 CCDC74BQ96LY2 380 aa10.75□□□□□ -0.69
SF3A1-203ENST00000444440 TMEM74Q96NL1 305 aa10.75□□□□□ -0.69
SF3A1-203ENST00000444440 OSBPL8Q9BZF1 889 aa10.75□□□□□ -0.69
SF3A1-203ENST00000444440 GPR63Q9BZJ6 419 aa10.75□□□□□ -0.69
SF3A1-203ENST00000444440 CARD9Q9H257 536 aa10.75□□□□□ -0.69
SF3A1-203ENST00000444440 FOXJ2Q9P0K8 574 aa10.75□□□□□ -0.69
SF3A1-203ENST00000444440 SCHIP1Q9P0W5 487 aaPredicted RBP10.75□□□□□ -0.69
SF3A1-203ENST00000444440 PISDQ9UG56 409 aa10.75□□□□□ -0.69
SF3A1-203ENST00000444440 ATRXP46100 2492 aa10.75□□□□□ -0.69
SF3A1-203ENST00000444440 SPENQ96T58 3664 aaKnown RBP10.74□□□□□ -0.69
SF3A1-203ENST00000444440 PRAMEF33A0A0G2JMD5 474 aa10.74□□□□□ -0.69
SF3A1-203ENST00000444440 HACD1B0YJ81 288 aa10.74□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms