RNA–Protein interactions for RNA: ENST00000443839.1

SMPD4P1-203, Transcript of sphingomyelin phosphodiesterase 4 pseudogene 1, humanhuman

TSL 1 (best) BASIC

Gene SMPD4P1, Length 2,108 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4P1-203ENST00000443839 TSNAXIP1Q2TAA8 658 aa9.43□□□□□ -0.9
SMPD4P1-203ENST00000443839 ZNF284Q2VY69 593 aa9.43□□□□□ -0.9
SMPD4P1-203ENST00000443839 ATP13A5Q4VNC0 1218 aa9.43□□□□□ -0.9
SMPD4P1-203ENST00000443839 IER5LQ5T953 404 aa9.43□□□□□ -0.9
SMPD4P1-203ENST00000443839 LIPIQ6XZB0 460 aa9.43□□□□□ -0.9
SMPD4P1-203ENST00000443839 CPLX4Q7Z7G2 160 aa9.43□□□□□ -0.9
SMPD4P1-203ENST00000443839 CENPLQ8N0S6 344 aaPredicted RBP9.43□□□□□ -0.9
SMPD4P1-203ENST00000443839 NXPE1Q8N323 547 aa9.43□□□□□ -0.9
SMPD4P1-203ENST00000443839 SPATA6LQ8N4H0 392 aa9.43□□□□□ -0.9
SMPD4P1-203ENST00000443839 TXNDC5Q8NBS9 432 aaKnown RBP9.43□□□□□ -0.9
SMPD4P1-203ENST00000443839 SCAMP4Q969E2 229 aa9.43□□□□□ -0.9
SMPD4P1-203ENST00000443839 RAB7BQ96AH8 199 aa9.43□□□□□ -0.9
SMPD4P1-203ENST00000443839 MSANTD3Q96H12 275 aa9.43□□□□□ -0.9
SMPD4P1-203ENST00000443839 BIRC8Q96P09 236 aa9.43□□□□□ -0.9
SMPD4P1-203ENST00000443839 ZNF317Q96PQ6 595 aaPredicted RBP9.43□□□□□ -0.9
SMPD4P1-203ENST00000443839 CDH19Q9H159 772 aa9.43□□□□□ -0.9
SMPD4P1-203ENST00000443839 RUVBL2Q9Y230 463 aaKnown RBP9.43□□□□□ -0.9
SMPD4P1-203ENST00000443839 PCDHB1Q9Y5F3 818 aa9.43□□□□□ -0.9
SMPD4P1-203ENST00000443839 VCANP13611 3396 aa9.43□□□□□ -0.9
SMPD4P1-203ENST00000443839 TRBV5-4A0A0C4DH59 114 aa9.43□□□□□ -0.9
SMPD4P1-203ENST00000443839 RGSL1A5PLK6 1076 aa9.43□□□□□ -0.9
SMPD4P1-203ENST00000443839 PSMD11O00231 422 aa9.43□□□□□ -0.9
SMPD4P1-203ENST00000443839 NDUFAB1O14561 156 aa9.43□□□□□ -0.9
SMPD4P1-203ENST00000443839 WNT9AO14904 365 aa9.43□□□□□ -0.9
SMPD4P1-203ENST00000443839 MID1O15344 667 aa9.43□□□□□ -0.9
SMPD4P1-203ENST00000443839 SPINT1O43278 529 aa9.43□□□□□ -0.9
SMPD4P1-203ENST00000443839 MAP3K13O43283 966 aa9.43□□□□□ -0.9
SMPD4P1-203ENST00000443839 VPS26AO75436 327 aa9.43□□□□□ -0.9
SMPD4P1-203ENST00000443839 KLHL2O95198 593 aa9.43□□□□□ -0.9
SMPD4P1-203ENST00000443839 PROCP04070 461 aa9.43□□□□□ -0.9
SMPD4P1-203ENST00000443839 APOA4P06727 396 aa9.43□□□□□ -0.9
SMPD4P1-203ENST00000443839 PYGLP06737 847 aa9.43□□□□□ -0.9
SMPD4P1-203ENST00000443839 CCDC166P0CW27 439 aa9.43□□□□□ -0.9
SMPD4P1-203ENST00000443839 IL9P15248 144 aa9.43□□□□□ -0.9
SMPD4P1-203ENST00000443839 CHRM3P20309 590 aa9.43□□□□□ -0.9
SMPD4P1-203ENST00000443839 C5AR1P21730 350 aa9.43□□□□□ -0.9
SMPD4P1-203ENST00000443839 TFF2Q03403 129 aa9.43□□□□□ -0.9
SMPD4P1-203ENST00000443839 PUS10Q3MIT2 529 aaKnown RBP9.43□□□□□ -0.9
SMPD4P1-203ENST00000443839 AGAP9Q5VTM2 703 aa9.43□□□□□ -0.9
SMPD4P1-203ENST00000443839 ZNF776Q68DI1 518 aaPredicted RBP9.43□□□□□ -0.9
SMPD4P1-203ENST00000443839 PTRHD1Q6GMV3 140 aaKnown RBP9.43□□□□□ -0.9
SMPD4P1-203ENST00000443839 KIAA1211LQ6NV74 962 aa9.43□□□□□ -0.9
SMPD4P1-203ENST00000443839 KLC3Q6P597 504 aa9.43□□□□□ -0.9
SMPD4P1-203ENST00000443839 NUDCD3Q8IVD9 361 aa9.43□□□□□ -0.9
SMPD4P1-203ENST00000443839 OR2T3Q8NH03 318 aa9.43□□□□□ -0.9
SMPD4P1-203ENST00000443839 GANCQ8TET4 914 aa9.43□□□□□ -0.9
SMPD4P1-203ENST00000443839 FAM3CQ92520 227 aa9.43□□□□□ -0.9
SMPD4P1-203ENST00000443839 ULK4Q96C45 1275 aa9.43□□□□□ -0.9
SMPD4P1-203ENST00000443839 NXNL1Q96CM4 212 aa9.43□□□□□ -0.9
SMPD4P1-203ENST00000443839 CCT8L2Q96SF2 557 aa9.43□□□□□ -0.9
SMPD4P1-203ENST00000443839 COPS8Q99627 209 aa9.43□□□□□ -0.9
SMPD4P1-203ENST00000443839 GABRG3Q99928 467 aa9.43□□□□□ -0.9
SMPD4P1-203ENST00000443839 ZSCAN5AQ9BUG6 496 aa9.43□□□□□ -0.9
SMPD4P1-203ENST00000443839 MECRQ9BV79 373 aa9.43□□□□□ -0.9
SMPD4P1-203ENST00000443839 RIOK2Q9BVS4 552 aaKnown RBP9.43□□□□□ -0.9
SMPD4P1-203ENST00000443839 BOCQ9BWV1 1114 aa9.43□□□□□ -0.9
SMPD4P1-203ENST00000443839 C1QTNF1Q9BXJ1 281 aa9.43□□□□□ -0.9
SMPD4P1-203ENST00000443839 UNKQ9C0B0 810 aaKnown RBP9.43□□□□□ -0.9
SMPD4P1-203ENST00000443839 NSRP1Q9H0G5 558 aaKnown RBP9.43□□□□□ -0.9
SMPD4P1-203ENST00000443839 ABCG8Q9H221 673 aa9.43□□□□□ -0.9
SMPD4P1-203ENST00000443839 POPDC3Q9HBV1 291 aa9.43□□□□□ -0.9
SMPD4P1-203ENST00000443839 SLC2A4RGQ9NR83 387 aa9.43□□□□□ -0.9
SMPD4P1-203ENST00000443839 CAMSAP3Q9P1Y5 1249 aaPredicted RBP9.43□□□□□ -0.9
SMPD4P1-203ENST00000443839 CPSF2Q9P2I0 782 aaKnown RBP9.43□□□□□ -0.9
SMPD4P1-203ENST00000443839 GNPTGQ9UJJ9 305 aa9.43□□□□□ -0.9
SMPD4P1-203ENST00000443839 COMMD10Q9Y6G5 202 aa9.43□□□□□ -0.9
SMPD4P1-203ENST00000443839 AGAP14A8MT82 685 aa9.42□□□□□ -0.9
SMPD4P1-203ENST00000443839 ANKRD65E5RJM6 399 aa9.42□□□□□ -0.9
SMPD4P1-203ENST00000443839 BIRC5O15392 142 aa9.42□□□□□ -0.9
SMPD4P1-203ENST00000443839 LZTS3O60299 673 aaPredicted RBP9.42□□□□□ -0.9
SMPD4P1-203ENST00000443839 ADAM23O75077 832 aa9.42□□□□□ -0.9
SMPD4P1-203ENST00000443839 NIPSNAP2O75323 286 aa9.42□□□□□ -0.9
SMPD4P1-203ENST00000443839 FAM107AO95990 144 aa9.42□□□□□ -0.9
SMPD4P1-203ENST00000443839 BPGMP07738 259 aa9.42□□□□□ -0.9
SMPD4P1-203ENST00000443839 LTA4HP09960 611 aaKnown RBP9.42□□□□□ -0.9
SMPD4P1-203ENST00000443839 CPA3P15088 417 aa9.42□□□□□ -0.9
SMPD4P1-203ENST00000443839 TAC1P20366 129 aa9.42□□□□□ -0.9
SMPD4P1-203ENST00000443839 BGNP21810 368 aa9.42□□□□□ -0.9
SMPD4P1-203ENST00000443839 CD72P21854 359 aa9.42□□□□□ -0.9
SMPD4P1-203ENST00000443839 CA5AP35218 305 aa9.42□□□□□ -0.9
SMPD4P1-203ENST00000443839 MRPS21P82921 87 aaKnown RBP9.42□□□□□ -0.9
SMPD4P1-203ENST00000443839 CCDC15Q0P6D6 951 aa9.42□□□□□ -0.9
SMPD4P1-203ENST00000443839 SLC44A4Q53GD3 710 aa9.42□□□□□ -0.9
SMPD4P1-203ENST00000443839 CTSL3PQ5NE16 218 aa9.42□□□□□ -0.9
SMPD4P1-203ENST00000443839 LRRC8EQ6NSJ5 796 aa9.42□□□□□ -0.9
SMPD4P1-203ENST00000443839 LRRC34Q8IZ02 419 aa9.42□□□□□ -0.9
SMPD4P1-203ENST00000443839 AADATQ8N5Z0 425 aa9.42□□□□□ -0.9
SMPD4P1-203ENST00000443839 CLDN19Q8N6F1 224 aa9.42□□□□□ -0.9
SMPD4P1-203ENST00000443839 PPP1R14CQ8TAE6 165 aa9.42□□□□□ -0.9
SMPD4P1-203ENST00000443839 CXorf40AQ8TE69 158 aa9.42□□□□□ -0.9
SMPD4P1-203ENST00000443839 HEXDCQ8WVB3 486 aa9.42□□□□□ -0.9
SMPD4P1-203ENST00000443839 ZNF75CPQ92670 426 aaPredicted RBP9.42□□□□□ -0.9
SMPD4P1-203ENST00000443839 KCNJ9Q92806 393 aa9.42□□□□□ -0.9
SMPD4P1-203ENST00000443839 AP2M1Q96CW1 435 aa9.42□□□□□ -0.9
SMPD4P1-203ENST00000443839 GPR21Q99679 349 aa9.42□□□□□ -0.9
SMPD4P1-203ENST00000443839 MKRN2Q9H000 416 aaKnown RBP9.42□□□□□ -0.9
SMPD4P1-203ENST00000443839 P2RY12Q9H244 342 aa9.42□□□□□ -0.9
SMPD4P1-203ENST00000443839 MANSC1Q9H8J5 431 aa9.42□□□□□ -0.9
SMPD4P1-203ENST00000443839 FBRSQ9HAH7 460 aa9.42□□□□□ -0.9
SMPD4P1-203ENST00000443839 SARS2Q9NP81 518 aaKnown RBP9.42□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms