RNA–Protein interactions for RNA: ENST00000436412.1

NIF3L1-208, Transcript of NGG1 interacting factor 3 like 1, humanhuman

TSL 3

Gene NIF3L1, Length 479 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-208ENST00000436412 MMP12P39900 470 aa8.4□□□□□ -1.06
NIF3L1-208ENST00000436412 LIG3P49916 1009 aa8.4□□□□□ -1.06
NIF3L1-208ENST00000436412 CLCN7P51798 805 aa8.4□□□□□ -1.06
NIF3L1-208ENST00000436412 COPB1P53618 953 aaKnown RBP8.4□□□□□ -1.06
NIF3L1-208ENST00000436412 BPIFB4P59827 614 aa8.4□□□□□ -1.06
NIF3L1-208ENST00000436412 RHOAP61586 193 aa8.4□□□□□ -1.06
NIF3L1-208ENST00000436412 RPS26P62854 115 aaKnown RBP8.4□□□□□ -1.06
NIF3L1-208ENST00000436412 ABHD18Q0P651 414 aa8.4□□□□□ -1.06
NIF3L1-208ENST00000436412 ILF3Q12906 894 aaKnown RBP eCLIP8.4□□□□□ -1.06
NIF3L1-208ENST00000436412 BIRC2Q13490 618 aa8.4□□□□□ -1.06
NIF3L1-208ENST00000436412 RAPGEF1Q13905 1077 aa8.4□□□□□ -1.06
NIF3L1-208ENST00000436412 ARHGAP44Q17R89 818 aa8.4□□□□□ -1.06
NIF3L1-208ENST00000436412 DEFB109BQ30KR1 87 aa8.4□□□□□ -1.06
NIF3L1-208ENST00000436412 FAM102AQ5T9C2 384 aaPredicted RBP8.4□□□□□ -1.06
NIF3L1-208ENST00000436412 MANEALQ5VSG8 457 aa8.4□□□□□ -1.06
NIF3L1-208ENST00000436412 RWDD4Q6NW29 188 aaKnown RBP8.4□□□□□ -1.06
NIF3L1-208ENST00000436412 TTI2Q6NXR4 508 aa8.4□□□□□ -1.06
NIF3L1-208ENST00000436412 TRIM65Q6PJ69 517 aa8.4□□□□□ -1.06
NIF3L1-208ENST00000436412 CEACAM20Q6UY09 585 aa8.4□□□□□ -1.06
NIF3L1-208ENST00000436412 C22orf34Q6ZV56 151 aa8.4□□□□□ -1.06
NIF3L1-208ENST00000436412 TMEM35BQ8NCS4 154 aa8.4□□□□□ -1.06
NIF3L1-208ENST00000436412 RCBTB1Q8NDN9 531 aa8.4□□□□□ -1.06
NIF3L1-208ENST00000436412 SSC4DQ8WTU2 575 aa8.4□□□□□ -1.06
NIF3L1-208ENST00000436412 FAM168AQ92567 244 aa8.4□□□□□ -1.06
NIF3L1-208ENST00000436412 FUBP1Q96AE4 644 aaKnown RBP8.4□□□□□ -1.06
NIF3L1-208ENST00000436412 C18orf8Q96DM3 657 aa8.4□□□□□ -1.06
NIF3L1-208ENST00000436412 ZNF641Q96N77 438 aaPredicted RBP8.4□□□□□ -1.06
NIF3L1-208ENST00000436412 NUDT22Q9BRQ3 303 aa8.4□□□□□ -1.06
NIF3L1-208ENST00000436412 GSDMCQ9BYG8 508 aa8.4□□□□□ -1.06
NIF3L1-208ENST00000436412 SPRY4Q9C004 299 aa8.4□□□□□ -1.06
NIF3L1-208ENST00000436412 PCDH12Q9NPG4 1184 aa8.4□□□□□ -1.06
NIF3L1-208ENST00000436412 SEMA3GQ9NS98 782 aa8.4□□□□□ -1.06
NIF3L1-208ENST00000436412 APEX2Q9UBZ4 518 aa8.4□□□□□ -1.06
NIF3L1-208ENST00000436412 VPS4AQ9UN37 437 aa8.4□□□□□ -1.06
NIF3L1-208ENST00000436412 DAAM1Q9Y4D1 1078 aa8.4□□□□□ -1.06
NIF3L1-208ENST00000436412 ATP6V1DQ9Y5K8 247 aa8.4□□□□□ -1.06
NIF3L1-208ENST00000436412 TACC2O95359 2948 aa8.4□□□□□ -1.06
NIF3L1-208ENST00000436412 SHANK1Q9Y566 2161 aa8.39□□□□□ -1.07
NIF3L1-208ENST00000436412 PRSS38A1L453 326 aa8.39□□□□□ -1.07
NIF3L1-208ENST00000436412 EFCAB7A8K855 629 aa8.39□□□□□ -1.07
NIF3L1-208ENST00000436412 DUX1O43812 170 aa8.39□□□□□ -1.07
NIF3L1-208ENST00000436412 PCCBP05166 539 aa8.39□□□□□ -1.07
NIF3L1-208ENST00000436412 FGF1P05230 155 aa8.39□□□□□ -1.07
NIF3L1-208ENST00000436412 TCN2P20062 427 aa8.39□□□□□ -1.07
NIF3L1-208ENST00000436412 CDH5P33151 784 aaPredicted RBP8.39□□□□□ -1.07
NIF3L1-208ENST00000436412 ADRA1BP35368 520 aa8.39□□□□□ -1.07
NIF3L1-208ENST00000436412 FLT3P36888 993 aa8.39□□□□□ -1.07
NIF3L1-208ENST00000436412 NOP2P46087 812 aaKnown RBP8.39□□□□□ -1.07
NIF3L1-208ENST00000436412 CFAP58Q5T655 872 aa8.39□□□□□ -1.07
NIF3L1-208ENST00000436412 KCTD16Q68DU8 428 aa8.39□□□□□ -1.07
NIF3L1-208ENST00000436412 TMEM71Q6P5X7 295 aa8.39□□□□□ -1.07
NIF3L1-208ENST00000436412 HEATR4Q86WZ0 1026 aa8.39□□□□□ -1.07
NIF3L1-208ENST00000436412 FAM131BQ86XD5 332 aa8.39□□□□□ -1.07
NIF3L1-208ENST00000436412 XYLT1Q86Y38 959 aa8.39□□□□□ -1.07
NIF3L1-208ENST00000436412 DNAAF5Q86Y56 855 aa8.39□□□□□ -1.07
NIF3L1-208ENST00000436412 SFTPA2Q8IWL1 248 aa8.39□□□□□ -1.07
NIF3L1-208ENST00000436412 HSCBQ8IWL3 235 aa8.39□□□□□ -1.07
NIF3L1-208ENST00000436412 MSANTD4Q8NCY6 345 aa8.39□□□□□ -1.07
NIF3L1-208ENST00000436412 NCAPGQ9BPX3 1015 aa8.39□□□□□ -1.07
NIF3L1-208ENST00000436412 WDR26Q9H7D7 661 aa8.39□□□□□ -1.07
NIF3L1-208ENST00000436412 MRPL40Q9NQ50 206 aaKnown RBP8.39□□□□□ -1.07
NIF3L1-208ENST00000436412 SPATS2LQ9NUQ6 558 aaKnown RBP8.39□□□□□ -1.07
NIF3L1-208ENST00000436412 TRNAU1APQ9NX07 287 aaKnown RBP8.39□□□□□ -1.07
NIF3L1-208ENST00000436412 KCTD5Q9NXV2 234 aa8.39□□□□□ -1.07
NIF3L1-208ENST00000436412 PDP2Q9P2J9 529 aa8.39□□□□□ -1.07
NIF3L1-208ENST00000436412 DNAI1Q9UI46 699 aa8.39□□□□□ -1.07
NIF3L1-208ENST00000436412 ATP8A1Q9Y2Q0 1164 aa8.39□□□□□ -1.07
NIF3L1-208ENST00000436412 ANKRD36A6QL64 1941 aa8.39□□□□□ -1.07
NIF3L1-208ENST00000436412 CELSR1Q9NYQ6 3014 aa8.38□□□□□ -1.07
NIF3L1-208ENST00000436412 IGHV1OR21-1A0A087WYE8 117 aa8.38□□□□□ -1.07
NIF3L1-208ENST00000436412 LOC101059948A0A1B0GTJ6 334 aa8.38□□□□□ -1.07
NIF3L1-208ENST00000436412 GTPBP10A4D1E9 387 aaKnown RBP8.38□□□□□ -1.07
NIF3L1-208ENST00000436412 ANKRD33BA6NCL7 494 aa8.38□□□□□ -1.07
NIF3L1-208ENST00000436412 RECQL5O94762 991 aaPredicted RBP8.38□□□□□ -1.07
NIF3L1-208ENST00000436412 FGFR1OPO95684 399 aaKnown RBP8.38□□□□□ -1.07
NIF3L1-208ENST00000436412 DDAH2O95865 285 aa8.38□□□□□ -1.07
NIF3L1-208ENST00000436412 PRKCGP05129 697 aa8.38□□□□□ -1.07
NIF3L1-208ENST00000436412 KRT7P08729 469 aa8.38□□□□□ -1.07
NIF3L1-208ENST00000436412 PRKAR1AP10644 381 aa8.38□□□□□ -1.07
NIF3L1-208ENST00000436412 OAS2P29728 719 aaKnown RBP8.38□□□□□ -1.07
NIF3L1-208ENST00000436412 MLLT10P55197 1068 aa8.38□□□□□ -1.07
NIF3L1-208ENST00000436412 MAZP56270 477 aaKnown RBP8.38□□□□□ -1.07
NIF3L1-208ENST00000436412 YBEYP58557 167 aaPredicted RBP8.38□□□□□ -1.07
NIF3L1-208ENST00000436412 MC2RQ01718 297 aa8.38□□□□□ -1.07
NIF3L1-208ENST00000436412 IKZF1Q13422 519 aa8.38□□□□□ -1.07
NIF3L1-208ENST00000436412 HIST2H2BCQ6DN03 193 aa8.38□□□□□ -1.07
NIF3L1-208ENST00000436412 CAPRIN2Q6IMN6 1127 aaKnown RBP8.38□□□□□ -1.07
NIF3L1-208ENST00000436412 GJB7Q6PEY0 223 aa8.38□□□□□ -1.07
NIF3L1-208ENST00000436412 LEKR1Q6ZMV7 388 aa8.38□□□□□ -1.07
NIF3L1-208ENST00000436412 GBP6Q6ZN66 633 aa8.38□□□□□ -1.07
NIF3L1-208ENST00000436412 ASB18Q6ZVZ8 466 aa8.38□□□□□ -1.07
NIF3L1-208ENST00000436412 FAM129CQ86XR2 697 aa8.38□□□□□ -1.07
NIF3L1-208ENST00000436412 ZNF354CQ86Y25 554 aa8.38□□□□□ -1.07
NIF3L1-208ENST00000436412 CCDC13Q8IYE1 715 aa8.38□□□□□ -1.07
NIF3L1-208ENST00000436412 NRSN1Q8IZ57 195 aa8.38□□□□□ -1.07
NIF3L1-208ENST00000436412 ESX1Q8N693 406 aa8.38□□□□□ -1.07
NIF3L1-208ENST00000436412 BMPERQ8N8U9 685 aa8.38□□□□□ -1.07
NIF3L1-208ENST00000436412 PLA2G15Q8NCC3 412 aa8.38□□□□□ -1.07
NIF3L1-208ENST00000436412 CCL4L1Q8NHW4 92 aa8.38□□□□□ -1.07
NIF3L1-208ENST00000436412 NELFBQ8WX92 580 aa8.38□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms