RNA–Protein interactions for RNA: ENST00000436336.6

CPSF4-204, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CPSF4, Length 1,738 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-204ENST00000436336 ZNF217O75362 1048 aa22.82■■□□□ 1.24
CPSF4-204ENST00000436336 PYGLP06737 847 aa22.82■■□□□ 1.24
CPSF4-204ENST00000436336 ZNF7P17097 686 aaPredicted RBP22.82■■□□□ 1.24
CPSF4-204ENST00000436336 OXTRP30559 389 aa22.82■■□□□ 1.24
CPSF4-204ENST00000436336 MAMSTRQ6ZN01 415 aa22.82■■□□□ 1.24
CPSF4-204ENST00000436336 SRRM1Q8IYB3 904 aaKnown RBP22.82■■□□□ 1.24
CPSF4-204ENST00000436336 RBFAQ8N0V3 343 aa22.82■■□□□ 1.24
CPSF4-204ENST00000436336 ISL2Q96A47 359 aa22.82■■□□□ 1.24
CPSF4-204ENST00000436336 ZDHHC3Q9NYG2 299 aa22.82■■□□□ 1.24
CPSF4-204ENST00000436336 DLGAP2Q9P1A6 1054 aa22.82■■□□□ 1.24
CPSF4-204ENST00000436336 FAM47DPA6NHR8 397 aa22.82■■□□□ 1.24
CPSF4-204ENST00000436336 PDGFBP01127 241 aaPredicted RBP22.82■■□□□ 1.24
CPSF4-204ENST00000436336 CXCL12P48061 93 aa22.82■■□□□ 1.24
CPSF4-204ENST00000436336 CCR3P51677 355 aa22.82■■□□□ 1.24
CPSF4-204ENST00000436336 SGCGQ13326 291 aa22.82■■□□□ 1.24
CPSF4-204ENST00000436336 GPATCH11Q8N954 259 aa22.82■■□□□ 1.24
CPSF4-204ENST00000436336 BTN2A2Q8WVV5 523 aa22.82■■□□□ 1.24
CPSF4-204ENST00000436336 ASB12Q8WXK4 309 aa22.82■■□□□ 1.24
CPSF4-204ENST00000436336 SLC17A9Q9BYT1 436 aa22.82■■□□□ 1.24
CPSF4-204ENST00000436336 TMPRSS11EQ9UL52 423 aa22.82■■□□□ 1.24
CPSF4-204ENST00000436336 TECTAO75443 2155 aa22.81■■□□□ 1.24
CPSF4-204ENST00000436336 OR1I1O60431 355 aa22.81■■□□□ 1.24
CPSF4-204ENST00000436336 RFPL1O75677 317 aa22.81■■□□□ 1.24
CPSF4-204ENST00000436336 SOD1P00441 154 aa22.81■■□□□ 1.24
CPSF4-204ENST00000436336 ALDOAP04075 364 aaKnown RBP22.81■■□□□ 1.24
CPSF4-204ENST00000436336 GPR1P46091 355 aa22.81■■□□□ 1.24
CPSF4-204ENST00000436336 SERPINB8P50452 374 aa22.81■■□□□ 1.24
CPSF4-204ENST00000436336 POU4F1Q01851 419 aa22.81■■□□□ 1.24
CPSF4-204ENST00000436336 RBM20Q5T481 1227 aaKnown RBP22.81■■□□□ 1.24
CPSF4-204ENST00000436336 RAET1GQ6H3X3 334 aa22.81■■□□□ 1.24
CPSF4-204ENST00000436336 FAM45BPQ6NSW5 357 aa22.81■■□□□ 1.24
CPSF4-204ENST00000436336 TRIM69Q86WT6 500 aa22.81■■□□□ 1.24
CPSF4-204ENST00000436336 FAM45AQ8TCE6 357 aa22.81■■□□□ 1.24
CPSF4-204ENST00000436336 ELMO2Q96JJ3 720 aa22.81■■□□□ 1.24
CPSF4-204ENST00000436336 SERAC1Q96JX3 654 aa22.81■■□□□ 1.24
CPSF4-204ENST00000436336 COPS8Q99627 209 aa22.81■■□□□ 1.24
CPSF4-204ENST00000436336 C1QTNF7Q9BXJ2 289 aa22.81■■□□□ 1.24
CPSF4-204ENST00000436336 CCDC68Q9H2F9 335 aa22.81■■□□□ 1.24
CPSF4-204ENST00000436336 SLC39A10Q9ULF5 831 aa22.81■■□□□ 1.24
CPSF4-204ENST00000436336 CYP8B1Q9UNU6 501 aa22.81■■□□□ 1.24
CPSF4-204ENST00000436336 PCDHB1Q9Y5F3 818 aa22.81■■□□□ 1.24
CPSF4-204ENST00000436336 COMMD10Q9Y6G5 202 aa22.81■■□□□ 1.24
CPSF4-204ENST00000436336 EML5Q05BV3 1969 aa22.8■■□□□ 1.24
CPSF4-204ENST00000436336 IGLV3-16A0A075B6K0 115 aa22.8■■□□□ 1.24
CPSF4-204ENST00000436336 PRMT5O14744 637 aaPredicted RBP22.8■■□□□ 1.24
CPSF4-204ENST00000436336 TPP1O14773 563 aa22.8■■□□□ 1.24
CPSF4-204ENST00000436336 SEMA4FO95754 770 aa22.8■■□□□ 1.24
CPSF4-204ENST00000436336 AOC1P19801 751 aa22.8■■□□□ 1.24
CPSF4-204ENST00000436336 RPS3P23396 243 aaKnown RBP eCLIP22.8■■□□□ 1.24
CPSF4-204ENST00000436336 FGL2Q14314 439 aa22.8■■□□□ 1.24
CPSF4-204ENST00000436336 USP10Q14694 798 aaKnown RBP22.8■■□□□ 1.24
CPSF4-204ENST00000436336 TMEM31Q5JXX7 168 aa22.8■■□□□ 1.24
CPSF4-204ENST00000436336 GPRC6AQ5T6X5 926 aa22.8■■□□□ 1.24
CPSF4-204ENST00000436336 ZNF549Q6P9A3 640 aa22.8■■□□□ 1.24
CPSF4-204ENST00000436336 DDHD1Q8NEL9 900 aa22.8■■□□□ 1.24
CPSF4-204ENST00000436336 ACVR1CQ8NER5 493 aa22.8■■□□□ 1.24
CPSF4-204ENST00000436336 GLYATL1Q969I3 302 aa22.8■■□□□ 1.24
CPSF4-204ENST00000436336 BIRC8Q96P09 236 aa22.8■■□□□ 1.24
CPSF4-204ENST00000436336 SMC6Q96SB8 1091 aa22.8■■□□□ 1.24
CPSF4-204ENST00000436336 NDNQ99608 321 aa22.8■■□□□ 1.24
CPSF4-204ENST00000436336 AARSD1Q9BTE6 412 aaKnown RBP22.8■■□□□ 1.24
CPSF4-204ENST00000436336 P2RY12Q9H244 342 aa22.8■■□□□ 1.24
CPSF4-204ENST00000436336 PAK4O96013 591 aaPredicted RBP22.79■■□□□ 1.24
CPSF4-204ENST00000436336 ESR1P03372 595 aa22.79■■□□□ 1.24
CPSF4-204ENST00000436336 KRT4P19013 534 aa22.79■■□□□ 1.24
CPSF4-204ENST00000436336 TYK2P29597 1187 aa22.79■■□□□ 1.24
CPSF4-204ENST00000436336 FMO4P31512 558 aa22.79■■□□□ 1.24
CPSF4-204ENST00000436336 NSG1P42857 185 aa22.79■■□□□ 1.24
CPSF4-204ENST00000436336 MAGEA12P43365 314 aa22.79■■□□□ 1.24
CPSF4-204ENST00000436336 PPP2CBP62714 309 aa22.79■■□□□ 1.24
CPSF4-204ENST00000436336 PPP2CAP67775 309 aa22.79■■□□□ 1.24
CPSF4-204ENST00000436336 LRRC14Q15048 493 aa22.79■■□□□ 1.24
CPSF4-204ENST00000436336 WSCD2Q2TBF2 565 aa22.79■■□□□ 1.24
CPSF4-204ENST00000436336 LDLRAP1Q5SW96 308 aa22.79■■□□□ 1.24
CPSF4-204ENST00000436336 HECTD2Q5U5R9 776 aa22.79■■□□□ 1.24
CPSF4-204ENST00000436336 SLC41A1Q8IVJ1 513 aa22.79■■□□□ 1.24
CPSF4-204ENST00000436336 PELI3Q8N2H9 469 aa22.79■■□□□ 1.24
CPSF4-204ENST00000436336 ACMSDQ8TDX5 336 aa22.79■■□□□ 1.24
CPSF4-204ENST00000436336 HEXDCQ8WVB3 486 aa22.79■■□□□ 1.24
CPSF4-204ENST00000436336 BOCQ9BWV1 1114 aa22.79■■□□□ 1.24
CPSF4-204ENST00000436336 TPSD1Q9BZJ3 242 aa22.79■■□□□ 1.24
CPSF4-204ENST00000436336 CLPBQ9H078 707 aa22.79■■□□□ 1.24
CPSF4-204ENST00000436336 CAB39LQ9H9S4 337 aa22.79■■□□□ 1.24
CPSF4-204ENST00000436336 SNX15Q9NRS6 342 aa22.79■■□□□ 1.24
CPSF4-204ENST00000436336 VWA7Q9Y334 891 aa22.79■■□□□ 1.24
CPSF4-204ENST00000436336 K7ESM1 405 aa22.79■■□□□ 1.24
CPSF4-204ENST00000436336 PI15O43692 258 aa22.79■■□□□ 1.24
CPSF4-204ENST00000436336 PKMP14618 531 aaKnown RBP22.79■■□□□ 1.24
CPSF4-204ENST00000436336 OAS2P29728 719 aaKnown RBP22.79■■□□□ 1.24
CPSF4-204ENST00000436336 CD6P30203 668 aa22.79■■□□□ 1.24
CPSF4-204ENST00000436336 SLC12A2P55011 1212 aa22.79■■□□□ 1.24
CPSF4-204ENST00000436336 PNCKQ6P2M8 343 aa22.79■■□□□ 1.24
CPSF4-204ENST00000436336 SH2D5Q6ZV89 423 aa22.79■■□□□ 1.24
CPSF4-204ENST00000436336 PHYKPLQ8IUZ5 450 aa22.79■■□□□ 1.24
CPSF4-204ENST00000436336 C4orf33Q8N1A6 199 aa22.79■■□□□ 1.24
CPSF4-204ENST00000436336 TP53I13Q8NBR0 393 aaPredicted RBP22.79■■□□□ 1.24
CPSF4-204ENST00000436336 GDAP1Q8TB36 358 aa22.79■■□□□ 1.24
CPSF4-204ENST00000436336 KLK6Q92876 244 aa22.79■■□□□ 1.24
CPSF4-204ENST00000436336 ALKBH8Q96BT7 664 aaKnown RBP22.79■■□□□ 1.24
CPSF4-204ENST00000436336 TSPAN17Q96FV3 270 aa22.79■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms