RNA–Protein interactions for RNA: ENST00000431429.1

HMGB1P27-201, Transcript of high mobility group box 1 pseudogene 27, humanhuman

BASIC

Gene HMGB1P27, Length 603 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P27-201ENST00000431429 OR2AK2Q8NG84 335 aa3.14□□□□□ -1.91
HMGB1P27-201ENST00000431429 HM13Q8TCT9 377 aa3.14□□□□□ -1.91
HMGB1P27-201ENST00000431429 TAS1R2Q8TE23 839 aa3.14□□□□□ -1.91
HMGB1P27-201ENST00000431429 ZG16BQ96DA0 208 aa3.14□□□□□ -1.91
HMGB1P27-201ENST00000431429 CFAP57Q96MR6 1250 aa3.14□□□□□ -1.91
HMGB1P27-201ENST00000431429 RTN4RQ9BZR6 473 aa3.14□□□□□ -1.91
HMGB1P27-201ENST00000431429 SPRTNQ9H040 489 aaPredicted RBP3.14□□□□□ -1.91
HMGB1P27-201ENST00000431429 SPATC1LQ9H0A9 340 aa3.14□□□□□ -1.91
HMGB1P27-201ENST00000431429 MMP27Q9H306 513 aa3.14□□□□□ -1.91
HMGB1P27-201ENST00000431429 TMPRSS5Q9H3S3 457 aa3.14□□□□□ -1.91
HMGB1P27-201ENST00000431429 C17orf75Q9HAS0 396 aa3.14□□□□□ -1.91
HMGB1P27-201ENST00000431429 NRIP3Q9NQ35 241 aa3.14□□□□□ -1.91
HMGB1P27-201ENST00000431429 CNGB3Q9NQW8 809 aa3.14□□□□□ -1.91
HMGB1P27-201ENST00000431429 OLAHQ9NV23 265 aa3.14□□□□□ -1.91
HMGB1P27-201ENST00000431429 TAB2Q9NYJ8 693 aa3.14□□□□□ -1.91
HMGB1P27-201ENST00000431429 SELENONQ9NZV5 590 aa3.14□□□□□ -1.91
HMGB1P27-201ENST00000431429 RCOR1Q9UKL0 485 aa3.14□□□□□ -1.91
HMGB1P27-201ENST00000431429 AGO1Q9UL18 857 aaKnown RBP3.14□□□□□ -1.91
HMGB1P27-201ENST00000431429 PADI3Q9ULW8 664 aa3.14□□□□□ -1.91
HMGB1P27-201ENST00000431429 FEZF1A0PJY2 475 aa3.13□□□□□ -1.91
HMGB1P27-201ENST00000431429 GOLGA6L9A6NEM1 432 aa3.13□□□□□ -1.91
HMGB1P27-201ENST00000431429 B4DGG1 531 aa3.13□□□□□ -1.91
HMGB1P27-201ENST00000431429 INAFM1C9JVW0 142 aa3.13□□□□□ -1.91
HMGB1P27-201ENST00000431429 PI4K2BG5E9Z4 385 aa3.13□□□□□ -1.91
HMGB1P27-201ENST00000431429 H0YGN5 161 aa3.13□□□□□ -1.91
HMGB1P27-201ENST00000431429 VWA5AO00534 786 aa3.13□□□□□ -1.91
HMGB1P27-201ENST00000431429 KCNN4O15554 427 aa3.13□□□□□ -1.91
HMGB1P27-201ENST00000431429 SPRY1O43609 319 aaPredicted RBP3.13□□□□□ -1.91
HMGB1P27-201ENST00000431429 ZIC3O60481 467 aa3.13□□□□□ -1.91
HMGB1P27-201ENST00000431429 GPC4O75487 556 aa3.13□□□□□ -1.91
HMGB1P27-201ENST00000431429 RSL1D1O76021 490 aaKnown RBP3.13□□□□□ -1.91
HMGB1P27-201ENST00000431429 HSPA4LO95757 839 aa3.13□□□□□ -1.91
HMGB1P27-201ENST00000431429 GH2P01242 217 aa3.13□□□□□ -1.91
HMGB1P27-201ENST00000431429 MYBL1P10243 752 aa3.13□□□□□ -1.91
HMGB1P27-201ENST00000431429 IFNAR1P17181 557 aa3.13□□□□□ -1.91
HMGB1P27-201ENST00000431429 CPT2P23786 658 aa3.13□□□□□ -1.91
HMGB1P27-201ENST00000431429 NR2F2P24468 414 aa3.13□□□□□ -1.91
HMGB1P27-201ENST00000431429 LMO1P25800 156 aa3.13□□□□□ -1.91
HMGB1P27-201ENST00000431429 CAPZA2P47755 286 aa3.13□□□□□ -1.91
HMGB1P27-201ENST00000431429 AMTP48728 403 aa3.13□□□□□ -1.91
HMGB1P27-201ENST00000431429 LMAN1P49257 510 aa3.13□□□□□ -1.91
HMGB1P27-201ENST00000431429 ARSEP51690 589 aa3.13□□□□□ -1.91
HMGB1P27-201ENST00000431429 NUDT6P53370 316 aa3.13□□□□□ -1.91
HMGB1P27-201ENST00000431429 C21orf58P58505 322 aa3.13□□□□□ -1.91
HMGB1P27-201ENST00000431429 CSNK2A1P68400 391 aaPredicted RBP3.13□□□□□ -1.91
HMGB1P27-201ENST00000431429 ROR2Q01974 943 aaKnown RBP3.13□□□□□ -1.91
HMGB1P27-201ENST00000431429 TFCP2Q12800 502 aa3.13□□□□□ -1.91
HMGB1P27-201ENST00000431429 GRSF1Q12849 480 aaKnown RBP eCLIP3.13□□□□□ -1.91
HMGB1P27-201ENST00000431429 CBWD6Q4V339 395 aa3.13□□□□□ -1.91
HMGB1P27-201ENST00000431429 SETMARQ53H47 684 aaPredicted RBP3.13□□□□□ -1.91
HMGB1P27-201ENST00000431429 CBWD3Q5JTY5 395 aa3.13□□□□□ -1.91
HMGB1P27-201ENST00000431429 DNTTIP2Q5QJE6 756 aaKnown RBP3.13□□□□□ -1.91
HMGB1P27-201ENST00000431429 HECTD3Q5T447 861 aa3.13□□□□□ -1.91
HMGB1P27-201ENST00000431429 C8orf82Q6P1X6 216 aaPredicted RBP3.13□□□□□ -1.91
HMGB1P27-201ENST00000431429 BRAT1Q6PJG6 821 aa3.13□□□□□ -1.91
HMGB1P27-201ENST00000431429 LDB1Q86U70 411 aaPredicted RBP3.13□□□□□ -1.91
HMGB1P27-201ENST00000431429 VSIG1Q86XK7 387 aa3.13□□□□□ -1.91
HMGB1P27-201ENST00000431429 MAML2Q8IZL2 1156 aaPredicted RBP3.13□□□□□ -1.91
HMGB1P27-201ENST00000431429 RASGEF1CQ8N431 466 aa3.13□□□□□ -1.91
HMGB1P27-201ENST00000431429 PCDH20Q8N6Y1 951 aaKnown RBP3.13□□□□□ -1.91
HMGB1P27-201ENST00000431429 NANOGP1Q8N7R0 232 aa3.13□□□□□ -1.91
HMGB1P27-201ENST00000431429 NRACQ8N912 160 aa3.13□□□□□ -1.91
HMGB1P27-201ENST00000431429 CSNK2A3Q8NEV1 391 aa3.13□□□□□ -1.91
HMGB1P27-201ENST00000431429 NSMCE1Q8WV22 266 aa3.13□□□□□ -1.91
HMGB1P27-201ENST00000431429 LPGAT1Q92604 370 aa3.13□□□□□ -1.91
HMGB1P27-201ENST00000431429 RPL36ALQ969Q0 106 aaKnown RBP3.13□□□□□ -1.91
HMGB1P27-201ENST00000431429 SLC25A28Q96A46 364 aa3.13□□□□□ -1.91
HMGB1P27-201ENST00000431429 LINC00615Q96LM1 132 aaPredicted RBP3.13□□□□□ -1.91
HMGB1P27-201ENST00000431429 MMTAG2Q9BU76 263 aaKnown RBP3.13□□□□□ -1.91
HMGB1P27-201ENST00000431429 TMEM39BQ9GZU3 492 aa3.13□□□□□ -1.91
HMGB1P27-201ENST00000431429 FAM234AQ9H0X4 552 aa3.13□□□□□ -1.91
HMGB1P27-201ENST00000431429 SIL1Q9H173 461 aa3.13□□□□□ -1.91
HMGB1P27-201ENST00000431429 KCNK15Q9H427 330 aa3.13□□□□□ -1.91
HMGB1P27-201ENST00000431429 PCDH9Q9HC56 1237 aa3.13□□□□□ -1.91
HMGB1P27-201ENST00000431429 C1RLQ9NZP8 487 aa3.13□□□□□ -1.91
HMGB1P27-201ENST00000431429 PTGFRNQ9P2B2 879 aa3.13□□□□□ -1.91
HMGB1P27-201ENST00000431429 LARSQ9P2J5 1176 aaKnown RBP3.13□□□□□ -1.91
HMGB1P27-201ENST00000431429 STK39Q9UEW8 545 aa3.13□□□□□ -1.91
HMGB1P27-201ENST00000431429 AMACRQ9UHK6 382 aa3.13□□□□□ -1.91
HMGB1P27-201ENST00000431429 TTC7AQ9ULT0 858 aaPredicted RBP3.13□□□□□ -1.91
HMGB1P27-201ENST00000431429 EVPLQ92817 2033 aa3.13□□□□□ -1.91
HMGB1P27-201ENST00000431429 DISP3Q9P2K9 1392 aa3.12□□□□□ -1.91
HMGB1P27-201ENST00000431429 KIF21AQ7Z4S6 1674 aa3.12□□□□□ -1.91
HMGB1P27-201ENST00000431429 A0A0U1RQJ8 604 aa3.12□□□□□ -1.91
HMGB1P27-201ENST00000431429 URADA6NGE7 173 aa3.12□□□□□ -1.91
HMGB1P27-201ENST00000431429 CCDC188H7C350 402 aa3.12□□□□□ -1.91
HMGB1P27-201ENST00000431429 CCER2I3L3R5 266 aa3.12□□□□□ -1.91
HMGB1P27-201ENST00000431429 SPINT2O43291 252 aa3.12□□□□□ -1.91
HMGB1P27-201ENST00000431429 PLPP2O43688 288 aa3.12□□□□□ -1.91
HMGB1P27-201ENST00000431429 ITM2AO43736 263 aa3.12□□□□□ -1.91
HMGB1P27-201ENST00000431429 ZNF217O75362 1048 aa3.12□□□□□ -1.91
HMGB1P27-201ENST00000431429 GAGE7O76087 117 aa3.12□□□□□ -1.91
HMGB1P27-201ENST00000431429 RECQL5O94762 991 aaPredicted RBP3.12□□□□□ -1.91
HMGB1P27-201ENST00000431429 EGFP01133 1207 aa3.12□□□□□ -1.91
HMGB1P27-201ENST00000431429 AFPP02771 609 aaKnown RBP3.12□□□□□ -1.91
HMGB1P27-201ENST00000431429 TMEM191BP0C7N4 346 aa3.12□□□□□ -1.91
HMGB1P27-201ENST00000431429 GAGE12FP0CL80 117 aa3.12□□□□□ -1.91
HMGB1P27-201ENST00000431429 GAGE12GP0CL81 117 aa3.12□□□□□ -1.91
HMGB1P27-201ENST00000431429 GAGE12IP0CL82 117 aa3.12□□□□□ -1.91
HMGB1P27-201ENST00000431429 SCG2P13521 617 aa3.12□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 58.4 ms