RNA–Protein interactions for RNA: ENST00000431390.5

HMGN1-206, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 1,552 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-206ENST00000431390 RFLNAQ6ZTI6 216 aa18.1■□□□□ 0.49
HMGN1-206ENST00000431390 Q6ZVL8 140 aa18.1■□□□□ 0.49
HMGN1-206ENST00000431390 CMC1Q7Z7K0 106 aa18.1■□□□□ 0.49
HMGN1-206ENST00000431390 SLC41A1Q8IVJ1 513 aa18.1■□□□□ 0.49
HMGN1-206ENST00000431390 PNPLA1Q8N8W4 532 aa18.1■□□□□ 0.49
HMGN1-206ENST00000431390 ACVR1CQ8NER5 493 aa18.1■□□□□ 0.49
HMGN1-206ENST00000431390 PJA1Q8NG27 643 aa18.1■□□□□ 0.49
HMGN1-206ENST00000431390 CXorf40AQ8TE69 158 aa18.1■□□□□ 0.49
HMGN1-206ENST00000431390 ULK4Q96C45 1275 aa18.1■□□□□ 0.49
HMGN1-206ENST00000431390 TSPAN17Q96FV3 270 aa18.1■□□□□ 0.49
HMGN1-206ENST00000431390 CAB39LQ9H9S4 337 aa18.1■□□□□ 0.49
HMGN1-206ENST00000431390 CAMSAP3Q9P1Y5 1249 aaPredicted RBP18.1■□□□□ 0.49
HMGN1-206ENST00000431390 CRLS1Q9UJA2 301 aa18.1■□□□□ 0.49
HMGN1-206ENST00000431390 ADAM21Q9UKJ8 722 aa18.1■□□□□ 0.49
HMGN1-206ENST00000431390 CRYL1Q9Y2S2 319 aa18.1■□□□□ 0.49
HMGN1-206ENST00000431390 COMMD10Q9Y6G5 202 aa18.1■□□□□ 0.49
HMGN1-206ENST00000431390 OTOGLQ3ZCN5 2332 aa18.09■□□□□ 0.49
HMGN1-206ENST00000431390 WNT9AO14904 365 aa18.09■□□□□ 0.49
HMGN1-206ENST00000431390 TSPAN6O43657 245 aa18.09■□□□□ 0.49
HMGN1-206ENST00000431390 CHN1P15882 459 aa18.09■□□□□ 0.49
HMGN1-206ENST00000431390 STMN1P16949 149 aa18.09■□□□□ 0.49
HMGN1-206ENST00000431390 GM2AP17900 193 aa18.09■□□□□ 0.49
HMGN1-206ENST00000431390 ACRV1P26436 265 aa18.09■□□□□ 0.49
HMGN1-206ENST00000431390 CRABP2P29373 138 aa18.09■□□□□ 0.49
HMGN1-206ENST00000431390 CRHR1P34998 444 aa18.09■□□□□ 0.49
HMGN1-206ENST00000431390 ETV3P41162 512 aa18.09■□□□□ 0.49
HMGN1-206ENST00000431390 SLC12A2P55011 1212 aa18.09■□□□□ 0.49
HMGN1-206ENST00000431390 RAB10P61026 200 aa18.09■□□□□ 0.49
HMGN1-206ENST00000431390 SFSWAPQ12872 951 aaKnown RBP18.09■□□□□ 0.49
HMGN1-206ENST00000431390 PDE1CQ14123 709 aaPredicted RBP18.09■□□□□ 0.49
HMGN1-206ENST00000431390 MPP2Q14168 576 aa18.09■□□□□ 0.49
HMGN1-206ENST00000431390 ITIH4Q14624 930 aa18.09■□□□□ 0.49
HMGN1-206ENST00000431390 ACOX1Q15067 660 aa18.09■□□□□ 0.49
HMGN1-206ENST00000431390 TTC31Q49AM3 519 aaPredicted RBP18.09■□□□□ 0.49
HMGN1-206ENST00000431390 HENMT1Q5T8I9 393 aaKnown RBP18.09■□□□□ 0.49
HMGN1-206ENST00000431390 HECTD2Q5U5R9 776 aa18.09■□□□□ 0.49
HMGN1-206ENST00000431390 ZNF765Q7L2R6 523 aa18.09■□□□□ 0.49
HMGN1-206ENST00000431390 CCDC91Q7Z6B0 441 aa18.09■□□□□ 0.49
HMGN1-206ENST00000431390 SERPINA9Q86WD7 417 aa18.09■□□□□ 0.49
HMGN1-206ENST00000431390 NXPE1Q8N323 547 aa18.09■□□□□ 0.49
HMGN1-206ENST00000431390 TRAM1L1Q8N609 369 aa18.09■□□□□ 0.49
HMGN1-206ENST00000431390 DTD2Q96FN9 168 aa18.09■□□□□ 0.49
HMGN1-206ENST00000431390 AARSD1Q9BTE6 412 aaKnown RBP18.09■□□□□ 0.49
HMGN1-206ENST00000431390 ZSCAN5AQ9BUG6 496 aa18.09■□□□□ 0.49
HMGN1-206ENST00000431390 WRAP53Q9BUR4 548 aaKnown RBP18.09■□□□□ 0.49
HMGN1-206ENST00000431390 SMOXQ9NWM0 555 aa18.09■□□□□ 0.49
HMGN1-206ENST00000431390 ANKRD6Q9Y2G4 727 aa18.09■□□□□ 0.49
HMGN1-206ENST00000431390 VWA7Q9Y334 891 aa18.09■□□□□ 0.49
HMGN1-206ENST00000431390 DNAH14Q0VDD8 3507 aa18.09■□□□□ 0.49
HMGN1-206ENST00000431390 A0A096LPK6 155 aa18.08■□□□□ 0.49
HMGN1-206ENST00000431390 A0A1W2PP55 124 aa18.08■□□□□ 0.49
HMGN1-206ENST00000431390 UBA6A0AVT1 1052 aaPredicted RBP18.08■□□□□ 0.49
HMGN1-206ENST00000431390 A6NNZ2 444 aa18.08■□□□□ 0.49
HMGN1-206ENST00000431390 CHURC1-FNTBB4DL54 471 aa18.08■□□□□ 0.49
HMGN1-206ENST00000431390 GPR39O43194 453 aa18.08■□□□□ 0.49
HMGN1-206ENST00000431390 GLRA3O75311 464 aa18.08■□□□□ 0.49
HMGN1-206ENST00000431390 C2P06681 752 aa18.08■□□□□ 0.49
HMGN1-206ENST00000431390 GSTA1P08263 222 aa18.08■□□□□ 0.49
HMGN1-206ENST00000431390 C6P13671 934 aa18.08■□□□□ 0.49
HMGN1-206ENST00000431390 ZNF7P17097 686 aaPredicted RBP18.08■□□□□ 0.49
HMGN1-206ENST00000431390 RPA3P35244 121 aaPredicted RBP18.08■□□□□ 0.49
HMGN1-206ENST00000431390 MDH1P40925 334 aaKnown RBP18.08■□□□□ 0.49
HMGN1-206ENST00000431390 TAS2R39P59534 338 aa18.08■□□□□ 0.49
HMGN1-206ENST00000431390 DBN1Q16643 649 aa18.08■□□□□ 0.49
HMGN1-206ENST00000431390 INSCQ1MX18 579 aa18.08■□□□□ 0.49
HMGN1-206ENST00000431390 ZNF284Q2VY69 593 aa18.08■□□□□ 0.49
HMGN1-206ENST00000431390 TUBB8Q3ZCM7 444 aa18.08■□□□□ 0.49
HMGN1-206ENST00000431390 TAF1BQ53T94 588 aaPredicted RBP18.08■□□□□ 0.49
HMGN1-206ENST00000431390 ZNF549Q6P9A3 640 aa18.08■□□□□ 0.49
HMGN1-206ENST00000431390 TMEM92Q6UXU6 159 aa18.08■□□□□ 0.49
HMGN1-206ENST00000431390 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP18.08■□□□□ 0.49
HMGN1-206ENST00000431390 LCA5Q86VQ0 697 aa18.08■□□□□ 0.49
HMGN1-206ENST00000431390 CACUL1Q86Y37 369 aa18.08■□□□□ 0.49
HMGN1-206ENST00000431390 RBFAQ8N0V3 343 aa18.08■□□□□ 0.49
HMGN1-206ENST00000431390 MDM1Q8TC05 714 aa18.08■□□□□ 0.49
HMGN1-206ENST00000431390 DENND1AQ8TEH3 1009 aa18.08■□□□□ 0.49
HMGN1-206ENST00000431390 SIPA1Q96FS4 1042 aa18.08■□□□□ 0.49
HMGN1-206ENST00000431390 NELL2Q99435 816 aa18.08■□□□□ 0.49
HMGN1-206ENST00000431390 NDNQ99608 321 aa18.08■□□□□ 0.49
HMGN1-206ENST00000431390 SPATA16Q9BXB7 569 aa18.08■□□□□ 0.49
HMGN1-206ENST00000431390 IQCGQ9H095 443 aaKnown RBP18.08■□□□□ 0.49
HMGN1-206ENST00000431390 ABCG8Q9H221 673 aa18.08■□□□□ 0.49
HMGN1-206ENST00000431390 CCDC68Q9H2F9 335 aa18.08■□□□□ 0.49
HMGN1-206ENST00000431390 LTB4R2Q9NPC1 389 aa18.08■□□□□ 0.49
HMGN1-206ENST00000431390 INTS9Q9NV88 658 aaKnown RBP18.08■□□□□ 0.49
HMGN1-206ENST00000431390 KCTD5Q9NXV2 234 aa18.08■□□□□ 0.49
HMGN1-206ENST00000431390 DCDC2Q9UHG0 476 aa18.08■□□□□ 0.49
HMGN1-206ENST00000431390 CD84Q9UIB8 345 aa18.08■□□□□ 0.49
HMGN1-206ENST00000431390 TLK1Q9UKI8 766 aa18.08■□□□□ 0.49
HMGN1-206ENST00000431390 PCDHB1Q9Y5F3 818 aa18.08■□□□□ 0.49
HMGN1-206ENST00000431390 WDR87Q6ZQQ6 2873 aa18.08■□□□□ 0.49
HMGN1-206ENST00000431390 PRMT5O14744 637 aaPredicted RBP18.08■□□□□ 0.48
HMGN1-206ENST00000431390 RNASEH2AO75792 299 aaKnown RBP18.08■□□□□ 0.48
HMGN1-206ENST00000431390 ESR1P03372 595 aa18.08■□□□□ 0.48
HMGN1-206ENST00000431390 UGT1A6P19224 532 aa18.08■□□□□ 0.48
HMGN1-206ENST00000431390 CD9P21926 228 aa18.08■□□□□ 0.48
HMGN1-206ENST00000431390 UGT1A1P22309 533 aa18.08■□□□□ 0.48
HMGN1-206ENST00000431390 UGT1A4P22310 534 aa18.08■□□□□ 0.48
HMGN1-206ENST00000431390 FDXRP22570 491 aa18.08■□□□□ 0.48
HMGN1-206ENST00000431390 RPS3P23396 243 aaKnown RBP eCLIP18.08■□□□□ 0.481e-8■□□□□ 8.7
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms