RNA–Protein interactions for RNA: ENST00000430889.2

HOXC4-202, Transcript of homeobox C4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXC4, Length 1,666 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC4-202ENST00000430889 CREMQ03060 361 aa13.85□□□□□ -0.19
HOXC4-202ENST00000430889 STX5Q13190 355 aa13.85□□□□□ -0.19
HOXC4-202ENST00000430889 ART3Q13508 389 aa13.85□□□□□ -0.19
HOXC4-202ENST00000430889 AGKQ53H12 422 aa13.85□□□□□ -0.19
HOXC4-202ENST00000430889 ZRANB3Q5FWF4 1079 aa13.85□□□□□ -0.19
HOXC4-202ENST00000430889 ARMC12Q5T9G4 340 aa13.85□□□□□ -0.19
HOXC4-202ENST00000430889 TXNDC11Q6PKC3 985 aa13.85□□□□□ -0.19
HOXC4-202ENST00000430889 IZUMO2Q6UXV1 221 aa13.85□□□□□ -0.19
HOXC4-202ENST00000430889 PDSS2Q86YH6 399 aa13.85□□□□□ -0.19
HOXC4-202ENST00000430889 HS6ST3Q8IZP7 471 aa13.85□□□□□ -0.19
HOXC4-202ENST00000430889 STK40Q8N2I9 435 aa13.85□□□□□ -0.19
HOXC4-202ENST00000430889 USP13Q92995 863 aaPredicted RBP13.85□□□□□ -0.19
HOXC4-202ENST00000430889 ACDQ96AP0 544 aa13.85□□□□□ -0.19
HOXC4-202ENST00000430889 C2orf49Q9BVC5 232 aaPredicted RBP13.85□□□□□ -0.19
HOXC4-202ENST00000430889 ZNF225Q9UK10 706 aa13.85□□□□□ -0.19
HOXC4-202ENST00000430889 PCTPQ9UKL6 214 aa13.85□□□□□ -0.19
HOXC4-202ENST00000430889 INTS6Q9UL03 887 aaKnown RBP13.85□□□□□ -0.19
HOXC4-202ENST00000430889 TMCO1Q9UM00 188 aa13.85□□□□□ -0.19
HOXC4-202ENST00000430889 ST14Q9Y5Y6 855 aa13.85□□□□□ -0.19
HOXC4-202ENST00000430889 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP13.84□□□□□ -0.19
HOXC4-202ENST00000430889 TRIM38O00635 465 aa13.84□□□□□ -0.19
HOXC4-202ENST00000430889 GPR39O43194 453 aa13.84□□□□□ -0.19
HOXC4-202ENST00000430889 PEX1O43933 1283 aa13.84□□□□□ -0.19
HOXC4-202ENST00000430889 SOCS5O75159 536 aa13.84□□□□□ -0.19
HOXC4-202ENST00000430889 CAPNS1P04632 268 aa13.84□□□□□ -0.19
HOXC4-202ENST00000430889 SNRPB2P08579 225 aaKnown RBP13.84□□□□□ -0.19
HOXC4-202ENST00000430889 PSME3P61289 254 aa13.84□□□□□ -0.19
HOXC4-202ENST00000430889 MRPS35P82673 323 aaKnown RBP13.84□□□□□ -0.19
HOXC4-202ENST00000430889 KLC1Q07866 573 aa13.84□□□□□ -0.19
HOXC4-202ENST00000430889 LMAN2Q12907 356 aa13.84□□□□□ -0.19
HOXC4-202ENST00000430889 OGFRL1Q5TC84 451 aaPredicted RBP13.84□□□□□ -0.19
HOXC4-202ENST00000430889 ANKS6Q68DC2 871 aa13.84□□□□□ -0.19
HOXC4-202ENST00000430889 OGFOD2Q6N063 350 aa13.84□□□□□ -0.19
HOXC4-202ENST00000430889 CAMK1DQ8IU85 385 aa13.84□□□□□ -0.19
HOXC4-202ENST00000430889 BBS7Q8IWZ6 715 aa13.84□□□□□ -0.19
HOXC4-202ENST00000430889 FIBINQ8TAL6 211 aa13.84□□□□□ -0.19
HOXC4-202ENST00000430889 TRPC4APQ8TEL6 797 aa13.84□□□□□ -0.19
HOXC4-202ENST00000430889 EEF1AKMT1Q8WVE0 214 aa13.84□□□□□ -0.19
HOXC4-202ENST00000430889 UCMAQ8WVF2 138 aa13.84□□□□□ -0.19
HOXC4-202ENST00000430889 GATA6Q92908 595 aa13.84□□□□□ -0.19
HOXC4-202ENST00000430889 CCDC97Q96F63 343 aaPredicted RBP13.84□□□□□ -0.19
HOXC4-202ENST00000430889 PLEKHG4BQ96PX9 1271 aa13.84□□□□□ -0.19
HOXC4-202ENST00000430889 KCNA7Q96RP8 456 aa13.84□□□□□ -0.19
HOXC4-202ENST00000430889 SLC25A23Q9BV35 468 aa13.84□□□□□ -0.19
HOXC4-202ENST00000430889 MRPL1Q9BYD6 325 aaKnown RBP13.84□□□□□ -0.19
HOXC4-202ENST00000430889 SUCOQ9UBS9 1254 aaKnown RBP13.84□□□□□ -0.19
HOXC4-202ENST00000430889 CD300AQ9UGN4 299 aa13.84□□□□□ -0.19
HOXC4-202ENST00000430889 TRMT6Q9UJA5 497 aaKnown RBP13.84□□□□□ -0.19
HOXC4-202ENST00000430889 ZNF510Q9Y2H8 683 aa13.84□□□□□ -0.19
HOXC4-202ENST00000430889 DHRS7Q9Y394 339 aa13.84□□□□□ -0.19
HOXC4-202ENST00000430889 PTGDR2Q9Y5Y4 395 aa13.84□□□□□ -0.19
HOXC4-202ENST00000430889 A0A0J9YYE9 177 aa13.83□□□□□ -0.2
HOXC4-202ENST00000430889 PRSS51A0A1B0GVH4 220 aa13.83□□□□□ -0.2
HOXC4-202ENST00000430889 ATP6AP2A0A1C7CYW4 349 aa13.83□□□□□ -0.2
HOXC4-202ENST00000430889 TRIM43BA6NCK2 446 aa13.83□□□□□ -0.2
HOXC4-202ENST00000430889 BTN3A1O00481 513 aa13.83□□□□□ -0.2
HOXC4-202ENST00000430889 EFCAB14O75071 495 aa13.83□□□□□ -0.2
HOXC4-202ENST00000430889 GPC4O75487 556 aa13.83□□□□□ -0.2
HOXC4-202ENST00000430889 ATP6AP2O75787 350 aa13.83□□□□□ -0.2
HOXC4-202ENST00000430889 TIMP1P01033 207 aa13.83□□□□□ -0.2
HOXC4-202ENST00000430889 TRBC1P01850 177 aa13.83□□□□□ -0.2
HOXC4-202ENST00000430889 ALPIP09923 528 aa13.83□□□□□ -0.2
HOXC4-202ENST00000430889 SPATA31D3P0C874 917 aa13.83□□□□□ -0.2
HOXC4-202ENST00000430889 CSF2RAP15509 400 aa13.83□□□□□ -0.2
HOXC4-202ENST00000430889 CTPS1P17812 591 aa13.83□□□□□ -0.2
HOXC4-202ENST00000430889 AGTR2P50052 363 aa13.83□□□□□ -0.2
HOXC4-202ENST00000430889 IL2P60568 153 aa13.83□□□□□ -0.2
HOXC4-202ENST00000430889 IRX1P78414 480 aaPredicted RBP13.83□□□□□ -0.2
HOXC4-202ENST00000430889 GRB7Q14451 532 aa13.83□□□□□ -0.2
HOXC4-202ENST00000430889 GSTA3Q16772 222 aa13.83□□□□□ -0.2
HOXC4-202ENST00000430889 EML3Q32P44 896 aa13.83□□□□□ -0.2
HOXC4-202ENST00000430889 SFT2D3Q587I9 215 aa13.83□□□□□ -0.2
HOXC4-202ENST00000430889 XKR7Q5GH72 579 aa13.83□□□□□ -0.2
HOXC4-202ENST00000430889 RETSATQ6NUM9 610 aa13.83□□□□□ -0.2
HOXC4-202ENST00000430889 CERS6Q6ZMG9 384 aa13.83□□□□□ -0.2
HOXC4-202ENST00000430889 SPATA31D4Q6ZUB0 917 aa13.83□□□□□ -0.2
HOXC4-202ENST00000430889 SYVN1Q86TM6 617 aa13.83□□□□□ -0.2
HOXC4-202ENST00000430889 CPNE9Q8IYJ1 553 aa13.83□□□□□ -0.2
HOXC4-202ENST00000430889 OR9I1Q8NGQ6 314 aa13.83□□□□□ -0.2
HOXC4-202ENST00000430889 TRIM43Q96BQ3 446 aaPredicted RBP13.83□□□□□ -0.2
HOXC4-202ENST00000430889 LINGO1Q96FE5 620 aa13.83□□□□□ -0.2
HOXC4-202ENST00000430889 MYCBPQ99417 103 aaPredicted RBP13.83□□□□□ -0.2
HOXC4-202ENST00000430889 NUSAP1Q9BXS6 441 aaKnown RBP13.83□□□□□ -0.2
HOXC4-202ENST00000430889 TM6SF2Q9BZW4 377 aa13.83□□□□□ -0.2
HOXC4-202ENST00000430889 SLC52A3Q9NQ40 469 aa13.83□□□□□ -0.2
HOXC4-202ENST00000430889 ABCB8Q9NUT2 735 aa13.83□□□□□ -0.2
HOXC4-202ENST00000430889 CCDC167Q9P0B6 97 aa13.83□□□□□ -0.2
HOXC4-202ENST00000430889 C6orf203Q9P0P8 240 aaPredicted RBP13.83□□□□□ -0.2
HOXC4-202ENST00000430889 CFAP97Q9P2B7 532 aa13.83□□□□□ -0.2
HOXC4-202ENST00000430889 POLG2Q9UHN1 485 aa13.83□□□□□ -0.2
HOXC4-202ENST00000430889 EVLQ9UI08 416 aaPredicted RBP13.83□□□□□ -0.2
HOXC4-202ENST00000430889 LSM7Q9UK45 103 aaKnown RBP13.83□□□□□ -0.2
HOXC4-202ENST00000430889 PKP3Q9Y446 797 aa13.83□□□□□ -0.2
HOXC4-202ENST00000430889 PCDHB1Q9Y5F3 818 aa13.83□□□□□ -0.2
HOXC4-202ENST00000430889 PIKFYVEQ9Y2I7 2098 aa13.83□□□□□ -0.2
HOXC4-202ENST00000430889 MYOFQ9NZM1 2061 aa13.83□□□□□ -0.2
HOXC4-202ENST00000430889 E7ENX8 843 aa13.82□□□□□ -0.2
HOXC4-202ENST00000430889 E2F3O00716 465 aa13.82□□□□□ -0.2
HOXC4-202ENST00000430889 PRMT5O14744 637 aaPredicted RBP13.82□□□□□ -0.2
HOXC4-202ENST00000430889 CFLARO15519 480 aa13.82□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 68.3 ms