RNA–Protein interactions for RNA: ENST00000427724.6

TCOF1-204, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 5

Gene TCOF1, Length 4,272 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-204ENST00000427724 ZNF542PQ5EBM4 170 aa10.6□□□□□ -0.71
TCOF1-204ENST00000427724 OLFML1Q6UWY5 402 aa10.6□□□□□ -0.71
TCOF1-204ENST00000427724 LRRTM3Q86VH5 581 aa10.6□□□□□ -0.71
TCOF1-204ENST00000427724 IFNLR1Q8IU57 520 aaPredicted RBP10.6□□□□□ -0.71
TCOF1-204ENST00000427724 CLVS1Q8IUQ0 354 aaPredicted RBP10.6□□□□□ -0.71
TCOF1-204ENST00000427724 RERGQ96A58 199 aaPredicted RBP10.6□□□□□ -0.71
TCOF1-204ENST00000427724 PHF12Q96QT6 1004 aa10.6□□□□□ -0.71
TCOF1-204ENST00000427724 HGH1Q9BTY7 390 aa10.6□□□□□ -0.71
TCOF1-204ENST00000427724 PHF7Q9BWX1 381 aaPredicted RBP10.6□□□□□ -0.71
TCOF1-204ENST00000427724 KLHL25Q9H0H3 589 aa10.6□□□□□ -0.71
TCOF1-204ENST00000427724 WDR26Q9H7D7 661 aa10.6□□□□□ -0.71
TCOF1-204ENST00000427724 UGT1A7Q9HAW7 530 aa10.6□□□□□ -0.71
TCOF1-204ENST00000427724 UGT1A10Q9HAW8 530 aa10.6□□□□□ -0.71
TCOF1-204ENST00000427724 UGT1A8Q9HAW9 530 aa10.6□□□□□ -0.71
TCOF1-204ENST00000427724 CYLDQ9NQC7 956 aa10.6□□□□□ -0.71
TCOF1-204ENST00000427724 HPS4Q9NQG7 708 aa10.6□□□□□ -0.71
TCOF1-204ENST00000427724 SLC2A4RGQ9NR83 387 aa10.6□□□□□ -0.71
TCOF1-204ENST00000427724 PIGVQ9NUD9 493 aa10.6□□□□□ -0.71
TCOF1-204ENST00000427724 PNPOQ9NVS9 261 aa10.6□□□□□ -0.71
TCOF1-204ENST00000427724 SELENONQ9NZV5 590 aa10.6□□□□□ -0.71
TCOF1-204ENST00000427724 SLCO3A1Q9UIG8 710 aa10.6□□□□□ -0.71
TCOF1-204ENST00000427724 EFR3BQ9Y2G0 817 aa10.6□□□□□ -0.71
TCOF1-204ENST00000427724 TRIM13O60858 407 aa10.59□□□□□ -0.71
TCOF1-204ENST00000427724 TNFAIP8O95379 198 aa10.59□□□□□ -0.71
TCOF1-204ENST00000427724 JMJD7P0C870 316 aa10.59□□□□□ -0.71
TCOF1-204ENST00000427724 ACP5P13686 325 aa10.59□□□□□ -0.71
TCOF1-204ENST00000427724 NELFEP18615 380 aaKnown RBP10.59□□□□□ -0.71
TCOF1-204ENST00000427724 MLLT6P55198 1093 aaPredicted RBP10.59□□□□□ -0.71
TCOF1-204ENST00000427724 DPY19L2P1Q6NXN4 242 aa10.59□□□□□ -0.71
TCOF1-204ENST00000427724 TRMT10BQ6PF06 316 aaKnown RBP10.59□□□□□ -0.71
TCOF1-204ENST00000427724 GDPD4Q6W3E5 623 aa10.59□□□□□ -0.71
TCOF1-204ENST00000427724 GPR141Q7Z602 305 aa10.59□□□□□ -0.71
TCOF1-204ENST00000427724 Q8N9G6 341 aaPredicted RBP10.59□□□□□ -0.71
TCOF1-204ENST00000427724 CYGBQ8WWM9 190 aa10.59□□□□□ -0.71
TCOF1-204ENST00000427724 DGCR14Q96DF8 476 aaKnown RBP10.59□□□□□ -0.71
TCOF1-204ENST00000427724 KCTD15Q96SI1 283 aaPredicted RBP10.59□□□□□ -0.71
TCOF1-204ENST00000427724 CDRT15Q96T59 188 aa10.59□□□□□ -0.71
TCOF1-204ENST00000427724 CDX2Q99626 313 aaPredicted RBP10.59□□□□□ -0.71
TCOF1-204ENST00000427724 NDEL1Q9GZM8 345 aa10.59□□□□□ -0.71
TCOF1-204ENST00000427724 CDH19Q9H159 772 aa10.59□□□□□ -0.71
TCOF1-204ENST00000427724 V9GYQ6 96 aa10.59□□□□□ -0.71
TCOF1-204ENST00000427724 SMCHD1A6NHR9 2005 aa10.59□□□□□ -0.71
TCOF1-204ENST00000427724 GLYATL1P3A0A0U1RQE8 302 aa10.59□□□□□ -0.71
TCOF1-204ENST00000427724 ANKDD1BA6NHY2 528 aa10.59□□□□□ -0.71
TCOF1-204ENST00000427724 INSIG1O15503 277 aa10.59□□□□□ -0.71
TCOF1-204ENST00000427724 MFSD11O43934 449 aa10.59□□□□□ -0.71
TCOF1-204ENST00000427724 E2F6O75461 281 aa10.59□□□□□ -0.71
TCOF1-204ENST00000427724 ARSAP15289 507 aa10.59□□□□□ -0.71
TCOF1-204ENST00000427724 PGAM1P18669 254 aa10.59□□□□□ -0.71
TCOF1-204ENST00000427724 ACVRL1P37023 503 aa10.59□□□□□ -0.71
TCOF1-204ENST00000427724 MRPS22P82650 360 aaKnown RBP10.59□□□□□ -0.71
TCOF1-204ENST00000427724 TP53BP2Q13625 1128 aa10.59□□□□□ -0.71
TCOF1-204ENST00000427724 TCEAL1Q15170 157 aa10.59□□□□□ -0.71
TCOF1-204ENST00000427724 TMEM173Q86WV6 379 aaPredicted RBP10.59□□□□□ -0.71
TCOF1-204ENST00000427724 VPS37AQ8NEZ2 397 aa10.59□□□□□ -0.71
TCOF1-204ENST00000427724 EFCAB1Q9HAE3 211 aa10.59□□□□□ -0.71
TCOF1-204ENST00000427724 GID8Q9NWU2 228 aa10.59□□□□□ -0.71
TCOF1-204ENST00000427724 ZNF180Q9UJW8 692 aa10.59□□□□□ -0.71
TCOF1-204ENST00000427724 RPL26L1Q9UNX3 145 aaKnown RBP10.59□□□□□ -0.71
TCOF1-204ENST00000427724 MGAT4DA6NG13 374 aa10.59□□□□□ -0.71
TCOF1-204ENST00000427724 BPGMP07738 259 aa10.59□□□□□ -0.71
TCOF1-204ENST00000427724 OCM2P0CE71 109 aa10.59□□□□□ -0.71
TCOF1-204ENST00000427724 OCMP0CE72 109 aaPredicted RBP10.59□□□□□ -0.71
TCOF1-204ENST00000427724 JUPP14923 745 aa10.59□□□□□ -0.71
TCOF1-204ENST00000427724 TSHRP16473 764 aa10.59□□□□□ -0.71
TCOF1-204ENST00000427724 MSX2P35548 267 aaPredicted RBP10.59□□□□□ -0.71
TCOF1-204ENST00000427724 PTPN9P43378 593 aa10.59□□□□□ -0.71
TCOF1-204ENST00000427724 CCR3P51677 355 aa10.59□□□□□ -0.71
TCOF1-204ENST00000427724 PLOD1Q02809 727 aaPredicted RBP10.59□□□□□ -0.71
TCOF1-204ENST00000427724 TFF2Q03403 129 aa10.59□□□□□ -0.71
TCOF1-204ENST00000427724 TEX44Q53QW1 395 aa10.59□□□□□ -0.71
TCOF1-204ENST00000427724 TTC33Q6PID6 262 aaPredicted RBP10.59□□□□□ -0.71
TCOF1-204ENST00000427724 NET1Q7Z628 596 aaPredicted RBP10.59□□□□□ -0.71
TCOF1-204ENST00000427724 ZNF655Q8N720 491 aaPredicted RBP10.59□□□□□ -0.71
TCOF1-204ENST00000427724 NAT8LQ8N9F0 302 aa10.59□□□□□ -0.71
TCOF1-204ENST00000427724 OR2AP1Q8NGE2 309 aa10.59□□□□□ -0.71
TCOF1-204ENST00000427724 SPATA22Q8NHS9 363 aa10.59□□□□□ -0.71
TCOF1-204ENST00000427724 LCN9Q8WX39 176 aa10.59□□□□□ -0.71
TCOF1-204ENST00000427724 IL36AQ9UHA7 158 aa10.59□□□□□ -0.71
TCOF1-204ENST00000427724 NUMA1Q14980 2115 aa10.59□□□□□ -0.71
TCOF1-204ENST00000427724 CCL22O00626 93 aa10.58□□□□□ -0.72
TCOF1-204ENST00000427724 RAD51BO15315 384 aa10.58□□□□□ -0.72
TCOF1-204ENST00000427724 NDST3O95803 873 aa10.58□□□□□ -0.72
TCOF1-204ENST00000427724 STK19P49842 368 aaPredicted RBP10.58□□□□□ -0.72
TCOF1-204ENST00000427724 IL2P60568 153 aa10.58□□□□□ -0.72
TCOF1-204ENST00000427724 IRF8Q02556 426 aa10.58□□□□□ -0.72
TCOF1-204ENST00000427724 MAPRE2Q15555 327 aa10.58□□□□□ -0.72
TCOF1-204ENST00000427724 MINDY4Q4G0A6 757 aa10.58□□□□□ -0.72
TCOF1-204ENST00000427724 STXBP5Q5T5C0 1151 aa10.58□□□□□ -0.72
TCOF1-204ENST00000427724 ALKBH2Q6NS38 261 aa10.58□□□□□ -0.72
TCOF1-204ENST00000427724 ZNF554Q86TJ5 538 aa10.58□□□□□ -0.72
TCOF1-204ENST00000427724 C10orf107Q8IVU9 208 aa10.58□□□□□ -0.72
TCOF1-204ENST00000427724 KYQ8NBH2 561 aa10.58□□□□□ -0.72
TCOF1-204ENST00000427724 C3orf58Q8NDZ4 430 aa10.58□□□□□ -0.72
TCOF1-204ENST00000427724 ZFAND2BQ8WV99 257 aa10.58□□□□□ -0.72
TCOF1-204ENST00000427724 MARK4Q96L34 752 aa10.58□□□□□ -0.72
TCOF1-204ENST00000427724 STRA6Q9BX79 667 aa10.58□□□□□ -0.72
TCOF1-204ENST00000427724 SLC39A8Q9C0K1 460 aa10.58□□□□□ -0.72
TCOF1-204ENST00000427724 SLC32A1Q9H598 525 aa10.58□□□□□ -0.72
TCOF1-204ENST00000427724 MRPL40Q9NQ50 206 aaKnown RBP10.58□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms