RNA–Protein interactions for RNA: ENST00000425942.3

TPM3P4-201, Transcript of tropomyosin 3 pseudogene 4, humanhuman

BASIC

Gene TPM3P4, Length 755 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3P4-201ENST00000425942 C17orf53Q8N3J3 647 aaPredicted RBP8.9□□□□□ -0.98
TPM3P4-201ENST00000425942 FSTL5Q8N475 847 aaPredicted RBP8.9□□□□□ -0.98
TPM3P4-201ENST00000425942 DCLK2Q8N568 766 aa8.9□□□□□ -0.98
TPM3P4-201ENST00000425942 SLC25A41Q8N5S1 370 aa8.9□□□□□ -0.98
TPM3P4-201ENST00000425942 GLIS1Q8NBF1 620 aa8.9□□□□□ -0.98
TPM3P4-201ENST00000425942 BBOF1Q8ND07 529 aa8.9□□□□□ -0.98
TPM3P4-201ENST00000425942 MCUQ8NE86 351 aa8.9□□□□□ -0.98
TPM3P4-201ENST00000425942 MNS1Q8NEH6 495 aa8.9□□□□□ -0.98
TPM3P4-201ENST00000425942 PPHLN1Q8NEY8 458 aaKnown RBP8.9□□□□□ -0.98
TPM3P4-201ENST00000425942 OR56A4Q8NGH8 313 aa8.9□□□□□ -0.98
TPM3P4-201ENST00000425942 KIF18AQ8NI77 898 aa8.9□□□□□ -0.98
TPM3P4-201ENST00000425942 STYXQ8WUJ0 223 aa8.9□□□□□ -0.98
TPM3P4-201ENST00000425942 FUBP1Q96AE4 644 aaKnown RBP8.9□□□□□ -0.98
TPM3P4-201ENST00000425942 ULK4Q96C45 1275 aa8.9□□□□□ -0.98
TPM3P4-201ENST00000425942 ZNF837Q96EG3 531 aaPredicted RBP8.9□□□□□ -0.98
TPM3P4-201ENST00000425942 COX14Q96I36 57 aa8.9□□□□□ -0.98
TPM3P4-201ENST00000425942 HIC2Q96JB3 615 aa8.9□□□□□ -0.98
TPM3P4-201ENST00000425942 DUSP23Q9BVJ7 150 aa8.9□□□□□ -0.98
TPM3P4-201ENST00000425942 MBNL1Q9NR56 388 aaKnown RBP8.9□□□□□ -0.98
TPM3P4-201ENST00000425942 TM7SF3Q9NS93 570 aa8.9□□□□□ -0.98
TPM3P4-201ENST00000425942 NCKIPSDQ9NZQ3 722 aa8.9□□□□□ -0.98
TPM3P4-201ENST00000425942 KLQ9UEF7 1012 aa8.9□□□□□ -0.98
TPM3P4-201ENST00000425942 APOBEC3BQ9UH17 382 aaKnown RBP8.9□□□□□ -0.98
TPM3P4-201ENST00000425942 ASIC3Q9UHC3 531 aa8.9□□□□□ -0.98
TPM3P4-201ENST00000425942 SPO11Q9Y5K1 396 aa8.9□□□□□ -0.98
TPM3P4-201ENST00000425942 CSNK1G3Q9Y6M4 447 aa8.9□□□□□ -0.98
TPM3P4-201ENST00000425942 GLYATL1P3A0A0U1RQE8 302 aa8.89□□□□□ -0.99
TPM3P4-201ENST00000425942 LOC105378220A0A1B0GUY1 285 aaPredicted RBP8.89□□□□□ -0.99
TPM3P4-201ENST00000425942 PRSS38A1L453 326 aa8.89□□□□□ -0.99
TPM3P4-201ENST00000425942 KLHL33A6NCF5 533 aa8.89□□□□□ -0.99
TPM3P4-201ENST00000425942 NEMP2A6NFY4 417 aa8.89□□□□□ -0.99
TPM3P4-201ENST00000425942 A8MX80 341 aa8.89□□□□□ -0.99
TPM3P4-201ENST00000425942 DNALI1O14645 258 aaPredicted RBP8.89□□□□□ -0.99
TPM3P4-201ENST00000425942 VEGFDO43915 354 aa8.89□□□□□ -0.99
TPM3P4-201ENST00000425942 USP12O75317 370 aa8.89□□□□□ -0.99
TPM3P4-201ENST00000425942 PIAS2O75928 621 aa8.89□□□□□ -0.99
TPM3P4-201ENST00000425942 PRAMEF1O95521 474 aa8.89□□□□□ -0.99
TPM3P4-201ENST00000425942 SLC4A1P02730 911 aa8.89□□□□□ -0.99
TPM3P4-201ENST00000425942 IVLP07476 585 aa8.89□□□□□ -0.99
TPM3P4-201ENST00000425942 PIRTP0C851 137 aa8.89□□□□□ -0.99
TPM3P4-201ENST00000425942 ITGALP20701 1170 aa8.89□□□□□ -0.99
TPM3P4-201ENST00000425942 CSRP1P21291 193 aaKnown RBP8.89□□□□□ -0.99
TPM3P4-201ENST00000425942 HK3P52790 923 aa8.89□□□□□ -0.99
TPM3P4-201ENST00000425942 PPARDQ03181 441 aa8.89□□□□□ -0.99
TPM3P4-201ENST00000425942 ACVR1Q04771 509 aa8.89□□□□□ -0.99
TPM3P4-201ENST00000425942 MSLNQ13421 630 aaPredicted RBP8.89□□□□□ -0.99
TPM3P4-201ENST00000425942 LRP8Q14114 963 aa8.89□□□□□ -0.99
TPM3P4-201ENST00000425942 FZD2Q14332 565 aa8.89□□□□□ -0.99
TPM3P4-201ENST00000425942 MORF4L2Q15014 288 aa8.89□□□□□ -0.99
TPM3P4-201ENST00000425942 LDLRAP1Q5SW96 308 aa8.89□□□□□ -0.99
TPM3P4-201ENST00000425942 SPATS2Q86XZ4 545 aaKnown RBP8.89□□□□□ -0.99
TPM3P4-201ENST00000425942 JAMLQ86YT9 394 aa8.89□□□□□ -0.99
TPM3P4-201ENST00000425942 KIAA2013Q8IYS2 634 aa8.89□□□□□ -0.99
TPM3P4-201ENST00000425942 PHACTR4Q8IZ21 702 aa8.89□□□□□ -0.99
TPM3P4-201ENST00000425942 DDHD1Q8NEL9 900 aa8.89□□□□□ -0.99
TPM3P4-201ENST00000425942 SPATA4Q8NEY3 305 aa8.89□□□□□ -0.99
TPM3P4-201ENST00000425942 HEXDCQ8WVB3 486 aa8.89□□□□□ -0.99
TPM3P4-201ENST00000425942 GLYATL1Q969I3 302 aa8.89□□□□□ -0.99
TPM3P4-201ENST00000425942 TBRG4Q969Z0 631 aaKnown RBP eCLIP8.89□□□□□ -0.99
TPM3P4-201ENST00000425942 SGSM3Q96HU1 749 aa8.89□□□□□ -0.99
TPM3P4-201ENST00000425942 RIOK2Q9BVS4 552 aaKnown RBP8.89□□□□□ -0.99
TPM3P4-201ENST00000425942 SPATA16Q9BXB7 569 aa8.89□□□□□ -0.99
TPM3P4-201ENST00000425942 SLC13A1Q9BZW2 595 aa8.89□□□□□ -0.99
TPM3P4-201ENST00000425942 PHACTR1Q9C0D0 580 aa8.89□□□□□ -0.99
TPM3P4-201ENST00000425942 RAB17Q9H0T7 212 aa8.89□□□□□ -0.99
TPM3P4-201ENST00000425942 SLC32A1Q9H598 525 aa8.89□□□□□ -0.99
TPM3P4-201ENST00000425942 NLE1Q9NVX2 485 aaPredicted RBP8.89□□□□□ -0.99
TPM3P4-201ENST00000425942 SMARCAL1Q9NZC9 954 aa8.89□□□□□ -0.99
TPM3P4-201ENST00000425942 BFARQ9NZS9 450 aa8.89□□□□□ -0.99
TPM3P4-201ENST00000425942 SPASTQ9UBP0 616 aa8.89□□□□□ -0.99
TPM3P4-201ENST00000425942 SLC17A4Q9Y2C5 497 aa8.89□□□□□ -0.99
TPM3P4-201ENST00000425942 CA5BQ9Y2D0 317 aa8.89□□□□□ -0.99
TPM3P4-201ENST00000425942 FNDC3AQ9Y2H6 1198 aaKnown RBP8.89□□□□□ -0.99
TPM3P4-201ENST00000425942 TCAF1Q9Y4C2 921 aa8.89□□□□□ -0.99
TPM3P4-201ENST00000425942 OR1A2Q9Y585 309 aa8.89□□□□□ -0.99
TPM3P4-201ENST00000425942 MRFAP1Q9Y605 127 aa8.89□□□□□ -0.99
TPM3P4-201ENST00000425942 PTPRZ1P23471 2315 aaPredicted RBP8.89□□□□□ -0.99
TPM3P4-201ENST00000425942 ARHGEF17Q96PE2 2063 aaPredicted RBP8.89□□□□□ -0.99
TPM3P4-201ENST00000425942 DCHS1Q96JQ0 3298 aa8.88□□□□□ -0.99
TPM3P4-201ENST00000425942 KNL1Q8NG31 2342 aa8.88□□□□□ -0.99
TPM3P4-201ENST00000425942 ARID1BQ8NFD5 2236 aaPredicted RBP8.88□□□□□ -0.99
TPM3P4-201ENST00000425942 MROH6A6NGR9 719 aa8.88□□□□□ -0.99
TPM3P4-201ENST00000425942 AGAP14A8MT82 685 aa8.88□□□□□ -0.99
TPM3P4-201ENST00000425942 F8W8V4 182 aa8.88□□□□□ -0.99
TPM3P4-201ENST00000425942 K7ESM1 405 aa8.88□□□□□ -0.99
TPM3P4-201ENST00000425942 QSOX1O00391 747 aa8.88□□□□□ -0.99
TPM3P4-201ENST00000425942 TPP1O14773 563 aa8.88□□□□□ -0.99
TPM3P4-201ENST00000425942 LDB2O43679 373 aa8.88□□□□□ -0.99
TPM3P4-201ENST00000425942 TMEM63AO94886 807 aa8.88□□□□□ -0.99
TPM3P4-201ENST00000425942 ZSCAN5DPP0CG00 497 aa8.88□□□□□ -0.99
TPM3P4-201ENST00000425942 ETS1P14921 441 aa8.88□□□□□ -0.99
TPM3P4-201ENST00000425942 PAMP19021 973 aa8.88□□□□□ -0.99
TPM3P4-201ENST00000425942 ADRA1DP25100 572 aa8.88□□□□□ -0.99
TPM3P4-201ENST00000425942 PPARGP37231 505 aaPredicted RBP8.88□□□□□ -0.99
TPM3P4-201ENST00000425942 MAGEA3P43357 314 aa8.88□□□□□ -0.99
TPM3P4-201ENST00000425942 NPY2RP49146 381 aa8.88□□□□□ -0.99
TPM3P4-201ENST00000425942 SEMG2Q02383 582 aa8.88□□□□□ -0.99
TPM3P4-201ENST00000425942 SEPT6Q14141 434 aa8.88□□□□□ -0.99
TPM3P4-201ENST00000425942 PUM1Q14671 1186 aaKnown RBP eCLIP8.88□□□□□ -0.99
TPM3P4-201ENST00000425942 POU6F1Q14863 301 aa8.88□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms