RNA–Protein interactions for RNA: ENST00000417664.6

SSBP3-205, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 5 BASIC

Gene SSBP3, Length 1,666 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-205ENST00000417664 GDF15Q99988 308 aa16.66■□□□□ 0.26
SSBP3-205ENST00000417664 ERVK-6Q9BXR3 956 aa16.66■□□□□ 0.26
SSBP3-205ENST00000417664 ZFP14Q9HCL3 533 aa16.66■□□□□ 0.26
SSBP3-205ENST00000417664 IL36AQ9UHA7 158 aa16.66■□□□□ 0.26
SSBP3-205ENST00000417664 CRLS1Q9UJA2 301 aa16.66■□□□□ 0.26
SSBP3-205ENST00000417664 CDH7Q9ULB5 785 aa16.66■□□□□ 0.26
SSBP3-205ENST00000417664 NEMP2A6NFY4 417 aa16.65■□□□□ 0.26
SSBP3-205ENST00000417664 TTC34A8MYJ7 566 aa16.65■□□□□ 0.26
SSBP3-205ENST00000417664 TRIM24O15164 1050 aa16.65■□□□□ 0.26
SSBP3-205ENST00000417664 NIPSNAP2O75323 286 aa16.65■□□□□ 0.26
SSBP3-205ENST00000417664 RASSF9O75901 435 aa16.65■□□□□ 0.26
SSBP3-205ENST00000417664 CBX6O95503 412 aa16.65■□□□□ 0.26
SSBP3-205ENST00000417664 CHRM1P11229 460 aaPredicted RBP16.65■□□□□ 0.26
SSBP3-205ENST00000417664 KCNA5P22460 613 aa16.65■□□□□ 0.26
SSBP3-205ENST00000417664 SP100P23497 879 aaPredicted RBP16.65■□□□□ 0.26
SSBP3-205ENST00000417664 MPSTP25325 297 aa16.65■□□□□ 0.26
SSBP3-205ENST00000417664 ARHGEF7Q14155 803 aa16.65■□□□□ 0.26
SSBP3-205ENST00000417664 CHRNA6Q15825 494 aa16.65■□□□□ 0.26
SSBP3-205ENST00000417664 ZNF805Q5CZA5 627 aa16.65■□□□□ 0.26
SSBP3-205ENST00000417664 ZNF678Q5SXM1 525 aa16.65■□□□□ 0.26
SSBP3-205ENST00000417664 PTRHD1Q6GMV3 140 aaKnown RBP16.65■□□□□ 0.26
SSBP3-205ENST00000417664 MACC1Q6ZN28 852 aa16.65■□□□□ 0.26
SSBP3-205ENST00000417664 GET4Q7L5D6 327 aaPredicted RBP16.65■□□□□ 0.26
SSBP3-205ENST00000417664 NXPE1Q8N323 547 aa16.65■□□□□ 0.26
SSBP3-205ENST00000417664 PTCD3Q96EY7 689 aaKnown RBP16.65■□□□□ 0.26
SSBP3-205ENST00000417664 NSUN3Q9H649 340 aaKnown RBP16.65■□□□□ 0.26
SSBP3-205ENST00000417664 SLC40A1Q9NP59 571 aa16.65■□□□□ 0.26
SSBP3-205ENST00000417664 PKD2L2Q9NZM6 624 aa16.65■□□□□ 0.26
SSBP3-205ENST00000417664 KLHL42Q9P2K6 505 aa16.65■□□□□ 0.26
SSBP3-205ENST00000417664 B4GALT6Q9UBX8 382 aa16.65■□□□□ 0.26
SSBP3-205ENST00000417664 ZDHHC2Q9UIJ5 367 aa16.65■□□□□ 0.26
SSBP3-205ENST00000417664 TRIM33Q9UPN9 1127 aa16.65■□□□□ 0.26
SSBP3-205ENST00000417664 RGSL1A5PLK6 1076 aa16.65■□□□□ 0.26
SSBP3-205ENST00000417664 TRPC5OSA6NMA1 111 aa16.65■□□□□ 0.26
SSBP3-205ENST00000417664 DIAPH2O60879 1101 aa16.65■□□□□ 0.26
SSBP3-205ENST00000417664 LEFTY1O75610 366 aa16.65■□□□□ 0.26
SSBP3-205ENST00000417664 ESRRAP11474 423 aaPredicted RBP16.65■□□□□ 0.26
SSBP3-205ENST00000417664 ARSAP15289 507 aa16.65■□□□□ 0.26
SSBP3-205ENST00000417664 AOC1P19801 751 aa16.65■□□□□ 0.26
SSBP3-205ENST00000417664 LHCGRP22888 699 aa16.65■□□□□ 0.26
SSBP3-205ENST00000417664 VIPR1P32241 457 aa16.65■□□□□ 0.26
SSBP3-205ENST00000417664 NSG1P42857 185 aa16.65■□□□□ 0.26
SSBP3-205ENST00000417664 KCNC1P48547 511 aa16.65■□□□□ 0.26
SSBP3-205ENST00000417664 SPINT3P49223 89 aa16.65■□□□□ 0.26
SSBP3-205ENST00000417664 CLCN7P51798 805 aa16.65■□□□□ 0.26
SSBP3-205ENST00000417664 FCHO2Q0JRZ9 810 aa16.65■□□□□ 0.26
SSBP3-205ENST00000417664 TCEAL5Q5H9L2 206 aa16.65■□□□□ 0.26
SSBP3-205ENST00000417664 ANKRD54Q6NXT1 300 aa16.65■□□□□ 0.26
SSBP3-205ENST00000417664 TTC7BQ86TV6 843 aa16.65■□□□□ 0.26
SSBP3-205ENST00000417664 RAVER1Q8IY67 606 aaKnown RBP16.65■□□□□ 0.26
SSBP3-205ENST00000417664 GPR26Q8NDV2 337 aa16.65■□□□□ 0.26
SSBP3-205ENST00000417664 SLC7A6OSQ96CW6 309 aaPredicted RBP16.65■□□□□ 0.26
SSBP3-205ENST00000417664 PHF21BQ96EK2 531 aa16.65■□□□□ 0.26
SSBP3-205ENST00000417664 CCDC106Q9BWC9 280 aa16.65■□□□□ 0.26
SSBP3-205ENST00000417664 EBF3Q9H4W6 596 aa16.65■□□□□ 0.26
SSBP3-205ENST00000417664 IGFLR1Q9H665 355 aa16.65■□□□□ 0.26
SSBP3-205ENST00000417664 MRGBPQ9NV56 204 aa16.65■□□□□ 0.26
SSBP3-205ENST00000417664 NFKBIL1Q9UBC1 381 aaPredicted RBP16.65■□□□□ 0.26
SSBP3-205ENST00000417664 RNF112Q9ULX5 631 aa16.65■□□□□ 0.26
SSBP3-205ENST00000417664 EPOPA6NHQ4 379 aa16.64■□□□□ 0.25
SSBP3-205ENST00000417664 UPK3BL1B0FP48 263 aa16.64■□□□□ 0.25
SSBP3-205ENST00000417664 UPK3BL2E5RIL1 263 aa16.64■□□□□ 0.25
SSBP3-205ENST00000417664 TSPAN12O95859 305 aa16.64■□□□□ 0.25
SSBP3-205ENST00000417664 MTHFD2P13995 350 aa16.64■□□□□ 0.25
SSBP3-205ENST00000417664 FCARP24071 287 aa16.64■□□□□ 0.25
SSBP3-205ENST00000417664 DCDC1P59894 354 aa16.64■□□□□ 0.25
SSBP3-205ENST00000417664 OR4D1Q15615 310 aa16.64■□□□□ 0.25
SSBP3-205ENST00000417664 PREPLQ4J6C6 727 aaPredicted RBP16.64■□□□□ 0.25
SSBP3-205ENST00000417664 ARSIQ5FYB1 569 aa16.64■□□□□ 0.25
SSBP3-205ENST00000417664 TXNDC11Q6PKC3 985 aa16.64■□□□□ 0.25
SSBP3-205ENST00000417664 ACAD11Q709F0 780 aa16.64■□□□□ 0.25
SSBP3-205ENST00000417664 C12orf40Q86WS4 652 aa16.64■□□□□ 0.25
SSBP3-205ENST00000417664 CPA6Q8N4T0 437 aa16.64■□□□□ 0.25
SSBP3-205ENST00000417664 SIDT2Q8NBJ9 832 aaKnown RBP16.64■□□□□ 0.25
SSBP3-205ENST00000417664 SORCS1Q8WY21 1168 aa16.64■□□□□ 0.25
SSBP3-205ENST00000417664 CCDC28BQ9BUN5 200 aa16.64■□□□□ 0.25
SSBP3-205ENST00000417664 CYP4F12Q9HCS2 524 aa16.64■□□□□ 0.25
SSBP3-205ENST00000417664 TCF7L2Q9NQB0 619 aa16.64■□□□□ 0.25
SSBP3-205ENST00000417664 LATS2Q9NRM7 1088 aa16.64■□□□□ 0.25
SSBP3-205ENST00000417664 ARL8BQ9NVJ2 186 aa16.64■□□□□ 0.25
SSBP3-205ENST00000417664 ZDHHC3Q9NYG2 299 aa16.64■□□□□ 0.25
SSBP3-205ENST00000417664 STX16-NPEPL1H3BU86 382 aa16.63■□□□□ 0.25
SSBP3-205ENST00000417664 STX16O14662 325 aa16.63■□□□□ 0.25
SSBP3-205ENST00000417664 KLK8O60259 260 aa16.63■□□□□ 0.25
SSBP3-205ENST00000417664 PRNPP04156 253 aa16.63■□□□□ 0.25
SSBP3-205ENST00000417664 RGS4P49798 205 aa16.63■□□□□ 0.25
SSBP3-205ENST00000417664 MNAT1P51948 309 aa16.63■□□□□ 0.25
SSBP3-205ENST00000417664 ALDH18A1P54886 795 aaKnown RBP16.63■□□□□ 0.25
SSBP3-205ENST00000417664 SATB1Q01826 763 aa16.63■□□□□ 0.25
SSBP3-205ENST00000417664 GAB4Q2WGN9 574 aa16.63■□□□□ 0.25
SSBP3-205ENST00000417664 SYCE2Q6PIF2 218 aa16.63■□□□□ 0.25
SSBP3-205ENST00000417664 FUBP1Q96AE4 644 aaKnown RBP16.63■□□□□ 0.25
SSBP3-205ENST00000417664 FAM136AQ96C01 138 aa16.63■□□□□ 0.25
SSBP3-205ENST00000417664 GSTO2Q9H4Y5 243 aa16.63■□□□□ 0.25
SSBP3-205ENST00000417664 SMOXQ9NWM0 555 aa16.63■□□□□ 0.25
SSBP3-205ENST00000417664 TAGLN3Q9UI15 199 aa16.63■□□□□ 0.25
SSBP3-205ENST00000417664 PRRC2BQ5JSZ5 2229 aaKnown RBP16.63■□□□□ 0.25
SSBP3-205ENST00000417664 IGLV3-16A0A075B6K0 115 aa16.62■□□□□ 0.25
SSBP3-205ENST00000417664 BTN3A1O00481 513 aa16.62■□□□□ 0.25
SSBP3-205ENST00000417664 SLC22A2O15244 555 aa16.62■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms