RNA–Protein interactions for RNA: ENST00000412393.5

LINC00342-201, long intergenic non-protein coding RNA 342, humanhuman

TSL 3 BASIC

Gene LINC00342, Length 654 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00342-201ENST00000412393 ZNF419Q96HQ0 510 aaPredicted RBP5.37□□□□□ -1.55
LINC00342-201ENST00000412393 LMLNQ96KR4 655 aa5.37□□□□□ -1.55
LINC00342-201ENST00000412393 BTN2A3PQ96KV6 586 aa5.37□□□□□ -1.55
LINC00342-201ENST00000412393 SLC2A13Q96QE2 648 aa5.37□□□□□ -1.55
LINC00342-201ENST00000412393 SPAG5Q96R06 1193 aa5.37□□□□□ -1.55
LINC00342-201ENST00000412393 ROPN1BQ9BZX4 212 aaPredicted RBP5.37□□□□□ -1.55
LINC00342-201ENST00000412393 TMEM245Q9H330 911 aa5.37□□□□□ -1.55
LINC00342-201ENST00000412393 SYNCQ9H7C4 482 aa5.37□□□□□ -1.55
LINC00342-201ENST00000412393 ROPN1Q9HAT0 212 aaPredicted RBP5.37□□□□□ -1.55
LINC00342-201ENST00000412393 NOD2Q9HC29 1040 aa5.37□□□□□ -1.55
LINC00342-201ENST00000412393 CAPN10Q9HC96 672 aa5.37□□□□□ -1.55
LINC00342-201ENST00000412393 PRSS16Q9NQE7 514 aa5.37□□□□□ -1.55
LINC00342-201ENST00000412393 DDIT4Q9NX09 232 aa5.37□□□□□ -1.55
LINC00342-201ENST00000412393 COX16Q9P0S2 106 aa5.37□□□□□ -1.55
LINC00342-201ENST00000412393 KIAA1522Q9P206 1035 aaPredicted RBP5.37□□□□□ -1.55
LINC00342-201ENST00000412393 SUN2Q9UH99 717 aa5.37□□□□□ -1.55
LINC00342-201ENST00000412393 XPO7Q9UIA9 1087 aaKnown RBP5.37□□□□□ -1.55
LINC00342-201ENST00000412393 INTS6Q9UL03 887 aaKnown RBP5.37□□□□□ -1.55
LINC00342-201ENST00000412393 PLAAQ9Y263 795 aa5.37□□□□□ -1.55
LINC00342-201ENST00000412393 COA3Q9Y2R0 106 aaPredicted RBP5.37□□□□□ -1.55
LINC00342-201ENST00000412393 TPRP12270 2363 aaKnown RBP5.37□□□□□ -1.55
LINC00342-201ENST00000412393 NCOR2Q9Y618 2525 aa5.37□□□□□ -1.55
LINC00342-201ENST00000412393 LAMA1P25391 3075 aa5.37□□□□□ -1.55
LINC00342-201ENST00000412393 CHD5Q8TDI0 1954 aa5.36□□□□□ -1.55
LINC00342-201ENST00000412393 TDRD6O60522 2096 aaKnown RBP5.36□□□□□ -1.55
LINC00342-201ENST00000412393 A0A1B0GVM2 712 aa5.36□□□□□ -1.55
LINC00342-201ENST00000412393 MACROD2A1Z1Q3 448 aa5.36□□□□□ -1.55
LINC00342-201ENST00000412393 M0QYT0 321 aa5.36□□□□□ -1.55
LINC00342-201ENST00000412393 AKR1B10O60218 316 aa5.36□□□□□ -1.55
LINC00342-201ENST00000412393 DAB1O75553 588 aa5.36□□□□□ -1.55
LINC00342-201ENST00000412393 TCEA3O75764 348 aa5.36□□□□□ -1.55
LINC00342-201ENST00000412393 ATP5HO75947 161 aa5.36□□□□□ -1.55
LINC00342-201ENST00000412393 ANP32DO95626 131 aa5.36□□□□□ -1.55
LINC00342-201ENST00000412393 AGTP01019 485 aa5.36□□□□□ -1.55
LINC00342-201ENST00000412393 IGLV3-19P01714 112 aa5.36□□□□□ -1.55
LINC00342-201ENST00000412393 DNTTP04053 509 aa5.36□□□□□ -1.55
LINC00342-201ENST00000412393 SRPRAP08240 638 aaKnown RBP5.36□□□□□ -1.55
LINC00342-201ENST00000412393 UCHL3P15374 230 aa5.36□□□□□ -1.55
LINC00342-201ENST00000412393 CYP11B1P15538 503 aa5.36□□□□□ -1.55
LINC00342-201ENST00000412393 CSRP1P21291 193 aaKnown RBP5.36□□□□□ -1.55
LINC00342-201ENST00000412393 ABCB4P21439 1286 aa5.36□□□□□ -1.55
LINC00342-201ENST00000412393 CCR1P32246 355 aa5.36□□□□□ -1.55
LINC00342-201ENST00000412393 CDH5P33151 784 aaPredicted RBP5.36□□□□□ -1.55
LINC00342-201ENST00000412393 NOVA1P51513 510 aaKnown RBP5.36□□□□□ -1.55
LINC00342-201ENST00000412393 HADHBP55084 474 aaKnown RBP5.36□□□□□ -1.55
LINC00342-201ENST00000412393 RNASE9P60153 205 aaKnown RBP5.36□□□□□ -1.55
LINC00342-201ENST00000412393 RPS14P62263 151 aaKnown RBP5.36□□□□□ -1.55
LINC00342-201ENST00000412393 ZBTB16Q05516 673 aa5.36□□□□□ -1.55
LINC00342-201ENST00000412393 BNIP1Q12981 228 aa5.36□□□□□ -1.55
LINC00342-201ENST00000412393 NME3Q13232 169 aa5.36□□□□□ -1.55
LINC00342-201ENST00000412393 MTA1Q13330 715 aa5.36□□□□□ -1.55
LINC00342-201ENST00000412393 PARP6Q2NL67 630 aa5.36□□□□□ -1.55
LINC00342-201ENST00000412393 HNRNPA1L2Q32P51 320 aaKnown RBP5.36□□□□□ -1.55
LINC00342-201ENST00000412393 PLEKHG6Q3KR16 790 aa5.36□□□□□ -1.55
LINC00342-201ENST00000412393 KRTAP15-1Q3LI76 137 aa5.36□□□□□ -1.55
LINC00342-201ENST00000412393 FSCBQ5H9T9 825 aa5.36□□□□□ -1.55
LINC00342-201ENST00000412393 PITRM1Q5JRX3 1037 aa5.36□□□□□ -1.55
LINC00342-201ENST00000412393 RABGAP1LQ5R372 815 aa5.36□□□□□ -1.55
LINC00342-201ENST00000412393 N4BP2L1Q5TBK1 243 aaPredicted RBP5.36□□□□□ -1.55
LINC00342-201ENST00000412393 RNF219Q5W0B1 726 aaPredicted RBP5.36□□□□□ -1.55
LINC00342-201ENST00000412393 ZNF776Q68DI1 518 aaPredicted RBP5.36□□□□□ -1.55
LINC00342-201ENST00000412393 IGFL4Q6B9Z1 124 aa5.36□□□□□ -1.55
LINC00342-201ENST00000412393 OLFML1Q6UWY5 402 aa5.36□□□□□ -1.55
LINC00342-201ENST00000412393 BZW1Q7L1Q6 419 aaKnown RBP5.36□□□□□ -1.55
LINC00342-201ENST00000412393 ASRGL1Q7L266 308 aa5.36□□□□□ -1.55
LINC00342-201ENST00000412393 SDCCAG8Q86SQ7 713 aaPredicted RBP5.36□□□□□ -1.55
LINC00342-201ENST00000412393 ERICH1Q86X53 443 aa5.36□□□□□ -1.55
LINC00342-201ENST00000412393 ZDHHC17Q8IUH5 632 aa5.36□□□□□ -1.55
LINC00342-201ENST00000412393 APCDD1Q8J025 514 aa5.36□□□□□ -1.55
LINC00342-201ENST00000412393 HDDC3Q8N4P3 179 aa5.36□□□□□ -1.55
LINC00342-201ENST00000412393 SH2D3CQ8N5H7 860 aa5.36□□□□□ -1.55
LINC00342-201ENST00000412393 MINDY1Q8N5J2 469 aa5.36□□□□□ -1.55
LINC00342-201ENST00000412393 LRRC57Q8N9N7 239 aa5.36□□□□□ -1.55
LINC00342-201ENST00000412393 TMEM35BQ8NCS4 154 aa5.36□□□□□ -1.55
LINC00342-201ENST00000412393 CADM4Q8NFZ8 388 aa5.36□□□□□ -1.55
LINC00342-201ENST00000412393 PHOSPHO1Q8TCT1 267 aa5.36□□□□□ -1.55
LINC00342-201ENST00000412393 DNASE2BQ8WZ79 361 aa5.36□□□□□ -1.55
LINC00342-201ENST00000412393 GRAMD1AQ96CP6 724 aa5.36□□□□□ -1.55
LINC00342-201ENST00000412393 C18orf8Q96DM3 657 aa5.36□□□□□ -1.55
LINC00342-201ENST00000412393 AJUBAQ96IF1 538 aa5.36□□□□□ -1.55
LINC00342-201ENST00000412393 MRGPRX3Q96LB0 322 aa5.36□□□□□ -1.55
LINC00342-201ENST00000412393 GDAP1L1Q96MZ0 367 aa5.36□□□□□ -1.55
LINC00342-201ENST00000412393 TMEM237Q96Q45 408 aa5.36□□□□□ -1.55
LINC00342-201ENST00000412393 PRMT1Q99873 361 aaKnown RBP5.36□□□□□ -1.55
LINC00342-201ENST00000412393 CCDC28BQ9BUN5 200 aa5.36□□□□□ -1.55
LINC00342-201ENST00000412393 GTPBP2Q9BX10 602 aaKnown RBP5.36□□□□□ -1.55
LINC00342-201ENST00000412393 STK33Q9BYT3 514 aa5.36□□□□□ -1.55
LINC00342-201ENST00000412393 STMN4Q9H169 189 aaPredicted RBP5.36□□□□□ -1.55
LINC00342-201ENST00000412393 GANQ9H2C0 597 aa5.36□□□□□ -1.55
LINC00342-201ENST00000412393 MTG2Q9H4K7 406 aa5.36□□□□□ -1.55
LINC00342-201ENST00000412393 MSL2Q9HCI7 577 aa5.36□□□□□ -1.55
LINC00342-201ENST00000412393 FSCN3Q9NQT6 498 aa5.36□□□□□ -1.55
LINC00342-201ENST00000412393 SPATS2LQ9NUQ6 558 aaKnown RBP5.36□□□□□ -1.55
LINC00342-201ENST00000412393 HAUS2Q9NVX0 235 aa5.36□□□□□ -1.55
LINC00342-201ENST00000412393 RRN3Q9NYV6 651 aa5.36□□□□□ -1.55
LINC00342-201ENST00000412393 ERVW-1Q9UQF0 538 aa5.36□□□□□ -1.55
LINC00342-201ENST00000412393 DNAH14Q0VDD8 3507 aa5.36□□□□□ -1.55
LINC00342-201ENST00000412393 TRPM6Q9BX84 2022 aa5.35□□□□□ -1.55
LINC00342-201ENST00000412393 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP5.35□□□□□ -1.55
LINC00342-201ENST00000412393 EDDM13A0A1B0GTR0 161 aa5.35□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms