RNA–Protein interactions for RNA: ENST00000409727.5

CHMP3-204, Transcript of charged multivesicular body protein 3, humanhuman

TSL 2 BASIC

Gene CHMP3, Length 1,851 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-204ENST00000409727 HOXB2P14652 356 aa12.36□□□□□ -0.43
CHMP3-204ENST00000409727 ZNF7P17097 686 aaPredicted RBP12.36□□□□□ -0.43
CHMP3-204ENST00000409727 DRD1P21728 446 aa12.36□□□□□ -0.43
CHMP3-204ENST00000409727 PPARGP37231 505 aaPredicted RBP12.36□□□□□ -0.43
CHMP3-204ENST00000409727 ELP6Q0PNE2 266 aa12.36□□□□□ -0.43
CHMP3-204ENST00000409727 TDGQ13569 410 aa12.36□□□□□ -0.43
CHMP3-204ENST00000409727 STARD3Q14849 445 aa12.36□□□□□ -0.43
CHMP3-204ENST00000409727 SLC44A4Q53GD3 710 aa12.36□□□□□ -0.43
CHMP3-204ENST00000409727 PTRHD1Q6GMV3 140 aaKnown RBP12.36□□□□□ -0.43
CHMP3-204ENST00000409727 LRRC8EQ6NSJ5 796 aa12.36□□□□□ -0.43
CHMP3-204ENST00000409727 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP12.36□□□□□ -0.43
CHMP3-204ENST00000409727 ZCCHC23Q6ZST2 131 aa12.36□□□□□ -0.43
CHMP3-204ENST00000409727 RBFAQ8N0V3 343 aa12.36□□□□□ -0.43
CHMP3-204ENST00000409727 NXPE1Q8N323 547 aa12.36□□□□□ -0.43
CHMP3-204ENST00000409727 SIDT2Q8NBJ9 832 aaKnown RBP12.36□□□□□ -0.43
CHMP3-204ENST00000409727 SCG3Q8WXD2 468 aaKnown RBP12.36□□□□□ -0.43
CHMP3-204ENST00000409727 FAM3CQ92520 227 aa12.36□□□□□ -0.43
CHMP3-204ENST00000409727 SGF29Q96ES7 293 aa12.36□□□□□ -0.43
CHMP3-204ENST00000409727 GPR21Q99679 349 aa12.36□□□□□ -0.43
CHMP3-204ENST00000409727 MKRN2Q9H000 416 aaKnown RBP12.36□□□□□ -0.43
CHMP3-204ENST00000409727 MANSC1Q9H8J5 431 aa12.36□□□□□ -0.43
CHMP3-204ENST00000409727 SLCO1B3Q9NPD5 702 aa12.36□□□□□ -0.43
CHMP3-204ENST00000409727 IGSF5Q9NSI5 407 aa12.36□□□□□ -0.43
CHMP3-204ENST00000409727 TAS2R13Q9NYV9 303 aa12.36□□□□□ -0.43
CHMP3-204ENST00000409727 SERGEFQ9UGK8 458 aa12.36□□□□□ -0.43
CHMP3-204ENST00000409727 TSR3Q9UJK0 312 aaKnown RBP12.36□□□□□ -0.43
CHMP3-204ENST00000409727 ZNF106Q9H2Y7 1883 aaKnown RBP12.35□□□□□ -0.43
CHMP3-204ENST00000409727 PRMT5O14744 637 aaPredicted RBP12.35□□□□□ -0.43
CHMP3-204ENST00000409727 WNT9AO14904 365 aa12.35□□□□□ -0.43
CHMP3-204ENST00000409727 MTX2O75431 263 aa12.35□□□□□ -0.43
CHMP3-204ENST00000409727 VPS26AO75436 327 aa12.35□□□□□ -0.43
CHMP3-204ENST00000409727 KLHL2O95198 593 aa12.35□□□□□ -0.43
CHMP3-204ENST00000409727 BPGMP07738 259 aa12.35□□□□□ -0.43
CHMP3-204ENST00000409727 LTA4HP09960 611 aaKnown RBP12.35□□□□□ -0.43
CHMP3-204ENST00000409727 COL9A1P20849 921 aa12.35□□□□□ -0.43
CHMP3-204ENST00000409727 DRD4P21917 467 aa12.35□□□□□ -0.43
CHMP3-204ENST00000409727 ALDH3A1P30838 453 aa12.35□□□□□ -0.43
CHMP3-204ENST00000409727 DRD3P35462 400 aa12.35□□□□□ -0.43
CHMP3-204ENST00000409727 CHI3L2Q15782 390 aa12.35□□□□□ -0.43
CHMP3-204ENST00000409727 CCDC153Q494R4 210 aa12.35□□□□□ -0.43
CHMP3-204ENST00000409727 GPR33Q49SQ1 333 aa12.35□□□□□ -0.43
CHMP3-204ENST00000409727 PIP5KL1Q5T9C9 394 aa12.35□□□□□ -0.43
CHMP3-204ENST00000409727 ZDHHC20Q5W0Z9 365 aa12.35□□□□□ -0.43
CHMP3-204ENST00000409727 PAQR3Q6TCH7 311 aa12.35□□□□□ -0.43
CHMP3-204ENST00000409727 DET1Q7L5Y6 550 aa12.35□□□□□ -0.43
CHMP3-204ENST00000409727 FSTL5Q8N475 847 aaPredicted RBP12.35□□□□□ -0.43
CHMP3-204ENST00000409727 HDDC3Q8N4P3 179 aa12.35□□□□□ -0.43
CHMP3-204ENST00000409727 RPLP0P6Q8NHW5 317 aa12.35□□□□□ -0.43
CHMP3-204ENST00000409727 PPP1R14CQ8TAE6 165 aa12.35□□□□□ -0.43
CHMP3-204ENST00000409727 THOC1Q96FV9 657 aaKnown RBP12.35□□□□□ -0.43
CHMP3-204ENST00000409727 SLC30A3Q99726 388 aa12.35□□□□□ -0.43
CHMP3-204ENST00000409727 C19orf43Q9BQ61 176 aa12.35□□□□□ -0.43
CHMP3-204ENST00000409727 HDAC8Q9BY41 377 aa12.35□□□□□ -0.43
CHMP3-204ENST00000409727 XPR1Q9UBH6 696 aa12.35□□□□□ -0.43
CHMP3-204ENST00000409727 MED16Q9Y2X0 877 aa12.35□□□□□ -0.43
CHMP3-204ENST00000409727 TRBV5-4A0A0C4DH59 114 aa12.34□□□□□ -0.43
CHMP3-204ENST00000409727 PRR23AA6NEV1 266 aa12.34□□□□□ -0.43
CHMP3-204ENST00000409727 AREL1O15033 823 aa12.34□□□□□ -0.43
CHMP3-204ENST00000409727 LZTS3O60299 673 aaPredicted RBP12.34□□□□□ -0.43
CHMP3-204ENST00000409727 RNASEH2AO75792 299 aaKnown RBP12.34□□□□□ -0.43
CHMP3-204ENST00000409727 TRIM16O95361 564 aa12.34□□□□□ -0.43
CHMP3-204ENST00000409727 FAM107AO95990 144 aa12.34□□□□□ -0.43
CHMP3-204ENST00000409727 ESR1P03372 595 aa12.34□□□□□ -0.43
CHMP3-204ENST00000409727 SRFP11831 508 aa12.34□□□□□ -0.43
CHMP3-204ENST00000409727 COL6A2P12110 1019 aa12.34□□□□□ -0.43
CHMP3-204ENST00000409727 C6P13671 934 aa12.34□□□□□ -0.43
CHMP3-204ENST00000409727 CPA3P15088 417 aa12.34□□□□□ -0.43
CHMP3-204ENST00000409727 GM2AP17900 193 aa12.34□□□□□ -0.43
CHMP3-204ENST00000409727 AKT1P31749 480 aa12.34□□□□□ -0.43
CHMP3-204ENST00000409727 COPAP53621 1224 aa12.34□□□□□ -0.43
CHMP3-204ENST00000409727 PTPN5P54829 565 aa12.34□□□□□ -0.43
CHMP3-204ENST00000409727 RPS14P62263 151 aaKnown RBP12.34□□□□□ -0.43
CHMP3-204ENST00000409727 ITGA9Q13797 1035 aa12.34□□□□□ -0.43
CHMP3-204ENST00000409727 PCLAFQ15004 111 aa12.34□□□□□ -0.43
CHMP3-204ENST00000409727 E2F5Q15329 346 aa12.34□□□□□ -0.43
CHMP3-204ENST00000409727 FAM83EQ2M2I3 478 aa12.34□□□□□ -0.43
CHMP3-204ENST00000409727 ZNF284Q2VY69 593 aa12.34□□□□□ -0.43
CHMP3-204ENST00000409727 ZNF648Q5T619 568 aaPredicted RBP12.34□□□□□ -0.43
CHMP3-204ENST00000409727 LYPLAL1Q5VWZ2 237 aa12.34□□□□□ -0.43
CHMP3-204ENST00000409727 ZNF776Q68DI1 518 aaPredicted RBP12.34□□□□□ -0.43
CHMP3-204ENST00000409727 TECPR1Q7Z6L1 1165 aa12.34□□□□□ -0.43
CHMP3-204ENST00000409727 C10orf107Q8IVU9 208 aa12.34□□□□□ -0.43
CHMP3-204ENST00000409727 CXorf40AQ8TE69 158 aa12.34□□□□□ -0.43
CHMP3-204ENST00000409727 ZNF473Q8WTR7 871 aaKnown RBP12.34□□□□□ -0.43
CHMP3-204ENST00000409727 AP2M1Q96CW1 435 aa12.34□□□□□ -0.43
CHMP3-204ENST00000409727 GPR78Q96P69 363 aa12.34□□□□□ -0.43
CHMP3-204ENST00000409727 GABRG3Q99928 467 aa12.34□□□□□ -0.43
CHMP3-204ENST00000409727 P2RY12Q9H244 342 aa12.34□□□□□ -0.43
CHMP3-204ENST00000409727 ACSS2Q9NR19 701 aa12.34□□□□□ -0.43
CHMP3-204ENST00000409727 COPG2Q9UBF2 871 aa12.34□□□□□ -0.43
CHMP3-204ENST00000409727 TMPRSS11EQ9UL52 423 aa12.34□□□□□ -0.43
CHMP3-204ENST00000409727 CA14Q9ULX7 337 aa12.34□□□□□ -0.43
CHMP3-204ENST00000409727 A0A1W2PQF6 199 aa12.34□□□□□ -0.43
CHMP3-204ENST00000409727 ERICH4A6NGS2 130 aa12.34□□□□□ -0.43
CHMP3-204ENST00000409727 SHISA7A6NL88 538 aa12.34□□□□□ -0.43
CHMP3-204ENST00000409727 FADS2P1A8MWK0 482 aa12.34□□□□□ -0.43
CHMP3-204ENST00000409727 INPP4BO15327 924 aa12.34□□□□□ -0.43
CHMP3-204ENST00000409727 RECQL5O94762 991 aaPredicted RBP12.34□□□□□ -0.43
CHMP3-204ENST00000409727 PCDH8O95206 1070 aa12.34□□□□□ -0.43
CHMP3-204ENST00000409727 ADH1BP00325 375 aa12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms