RNA–Protein interactions for RNA: ENST00000409416.5

COL6A2-204, Transcript of collagen type VI alpha 2 chain, humanhuman

TSL 5 BASIC

Gene COL6A2, Length 3,430 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2-204ENST00000409416 ACOT8O14734 319 aa13.31□□□□□ -0.28
COL6A2-204ENST00000409416 OR4F21O95013 312 aa13.31□□□□□ -0.28
COL6A2-204ENST00000409416 ASLP04424 464 aa13.31□□□□□ -0.28
COL6A2-204ENST00000409416 RBP1P09455 135 aa13.31□□□□□ -0.28
COL6A2-204ENST00000409416 COL6A2P12110 1019 aa13.31□□□□□ -0.28
COL6A2-204ENST00000409416 HSPA13P48723 471 aa13.31□□□□□ -0.28
COL6A2-204ENST00000409416 HCAR3P49019 387 aa13.31□□□□□ -0.28
COL6A2-204ENST00000409416 SLC11A2P49281 568 aa13.31□□□□□ -0.28
COL6A2-204ENST00000409416 DGKQP52824 942 aa13.31□□□□□ -0.28
COL6A2-204ENST00000409416 CBLBQ13191 982 aa13.31□□□□□ -0.28
COL6A2-204ENST00000409416 IKBKEQ14164 716 aa13.31□□□□□ -0.28
COL6A2-204ENST00000409416 TECRLQ5HYJ1 363 aa13.31□□□□□ -0.28
COL6A2-204ENST00000409416 CLVS1Q8IUQ0 354 aaPredicted RBP13.31□□□□□ -0.28
COL6A2-204ENST00000409416 CBR4Q8N4T8 237 aa13.31□□□□□ -0.28
COL6A2-204ENST00000409416 C2CD4AQ8NCU7 369 aaPredicted RBP13.31□□□□□ -0.28
COL6A2-204ENST00000409416 PNPT1Q8TCS8 783 aaKnown RBP13.31□□□□□ -0.28
COL6A2-204ENST00000409416 WBP2Q969T9 261 aa13.31□□□□□ -0.28
COL6A2-204ENST00000409416 TSPAN17Q96FV3 270 aa13.31□□□□□ -0.28
COL6A2-204ENST00000409416 HAUS8Q9BT25 410 aa13.31□□□□□ -0.28
COL6A2-204ENST00000409416 CIPCQ9C0C6 399 aa13.31□□□□□ -0.28
COL6A2-204ENST00000409416 NIPSNAP3AQ9UFN0 247 aaPredicted RBP13.31□□□□□ -0.28
COL6A2-204ENST00000409416 SPO11Q9Y5K1 396 aa13.31□□□□□ -0.28
COL6A2-204ENST00000409416 RAD54BQ9Y620 910 aa13.31□□□□□ -0.28
COL6A2-204ENST00000409416 VCANP13611 3396 aa13.31□□□□□ -0.28
COL6A2-204ENST00000409416 DOCK6Q96HP0 2047 aa13.31□□□□□ -0.28
COL6A2-204ENST00000409416 GSTA4O15217 222 aa13.3□□□□□ -0.28
COL6A2-204ENST00000409416 SH3BP5O60239 455 aa13.3□□□□□ -0.28
COL6A2-204ENST00000409416 NPHS1O60500 1241 aa13.3□□□□□ -0.28
COL6A2-204ENST00000409416 SYNCRIPO60506 623 aaKnown RBP13.3□□□□□ -0.28
COL6A2-204ENST00000409416 RPL9P32969 192 aaKnown RBP13.3□□□□□ -0.28
COL6A2-204ENST00000409416 LAPTM4AQ15012 233 aa13.3□□□□□ -0.28
COL6A2-204ENST00000409416 SAMD4BQ5PRF9 694 aaKnown RBP13.3□□□□□ -0.28
COL6A2-204ENST00000409416 CPSF7Q8N684 471 aaKnown RBP13.3□□□□□ -0.28
COL6A2-204ENST00000409416 PCSK9Q8NBP7 692 aaKnown RBP13.3□□□□□ -0.28
COL6A2-204ENST00000409416 OR4L1Q8NH43 312 aa13.3□□□□□ -0.28
COL6A2-204ENST00000409416 FBXO30Q8TB52 745 aa13.3□□□□□ -0.28
COL6A2-204ENST00000409416 CALML6Q8TD86 181 aa13.3□□□□□ -0.28
COL6A2-204ENST00000409416 ADNPQ9H2P0 1102 aa13.3□□□□□ -0.28
COL6A2-204ENST00000409416 MOSPD1Q9UJG1 213 aa13.3□□□□□ -0.28
COL6A2-204ENST00000409416 MYRFQ9Y2G1 1151 aa13.3□□□□□ -0.28
COL6A2-204ENST00000409416 C1orf232A0A0U1RR37 186 aa13.3□□□□□ -0.28
COL6A2-204ENST00000409416 PRSS51A0A1B0GVH4 220 aa13.3□□□□□ -0.28
COL6A2-204ENST00000409416 SYNDIG1LA6NDD5 238 aa13.3□□□□□ -0.28
COL6A2-204ENST00000409416 INHAP05111 366 aa13.3□□□□□ -0.28
COL6A2-204ENST00000409416 SLC2A4P14672 509 aa13.3□□□□□ -0.28
COL6A2-204ENST00000409416 ZNF23P17027 643 aa13.3□□□□□ -0.28
COL6A2-204ENST00000409416 NR1H2P55055 460 aa13.3□□□□□ -0.28
COL6A2-204ENST00000409416 HMGCS1Q01581 520 aa13.3□□□□□ -0.28
COL6A2-204ENST00000409416 LIN28BQ6ZN17 250 aaKnown RBP eCLIP13.3□□□□□ -0.28
COL6A2-204ENST00000409416 PCYOX1LQ8NBM8 494 aa13.3□□□□□ -0.28
COL6A2-204ENST00000409416 FBXO44Q9H4M3 255 aa13.3□□□□□ -0.28
COL6A2-204ENST00000409416 AKTIPQ9H8T0 292 aa13.3□□□□□ -0.28
COL6A2-204ENST00000409416 AGO1Q9UL18 857 aaKnown RBP13.3□□□□□ -0.28
COL6A2-204ENST00000409416 WDR90Q96KV7 1748 aa13.3□□□□□ -0.28
COL6A2-204ENST00000409416 TYW5A2RUC4 315 aaKnown RBP13.3□□□□□ -0.28
COL6A2-204ENST00000409416 HHLA1C9JL84 531 aa13.3□□□□□ -0.28
COL6A2-204ENST00000409416 HSPA7P48741 367 aa13.3□□□□□ -0.28
COL6A2-204ENST00000409416 INHBCP55103 352 aa13.3□□□□□ -0.28
COL6A2-204ENST00000409416 ZNF467Q7Z7K2 595 aaPredicted RBP13.3□□□□□ -0.28
COL6A2-204ENST00000409416 AHI1Q8N157 1196 aa13.3□□□□□ -0.28
COL6A2-204ENST00000409416 TMEM102Q8N9M5 508 aaPredicted RBP13.3□□□□□ -0.28
COL6A2-204ENST00000409416 FIG4Q92562 907 aa13.3□□□□□ -0.28
COL6A2-204ENST00000409416 RNF145Q96MT1 663 aa13.3□□□□□ -0.28
COL6A2-204ENST00000409416 SLC22A12Q96S37 553 aa13.3□□□□□ -0.28
COL6A2-204ENST00000409416 EXD2Q9NVH0 621 aa13.3□□□□□ -0.28
COL6A2-204ENST00000409416 TRPM5Q9NZQ8 1165 aa13.3□□□□□ -0.28
COL6A2-204ENST00000409416 KLQ9UEF7 1012 aa13.3□□□□□ -0.28
COL6A2-204ENST00000409416 C2orf81A6NN90 581 aa13.29□□□□□ -0.28
COL6A2-204ENST00000409416 UBFD1O14562 309 aaKnown RBP13.29□□□□□ -0.28
COL6A2-204ENST00000409416 GMNNO75496 209 aa13.29□□□□□ -0.28
COL6A2-204ENST00000409416 GNAO1P09471 354 aa13.29□□□□□ -0.28
COL6A2-204ENST00000409416 SREBF2Q12772 1141 aa13.29□□□□□ -0.28
COL6A2-204ENST00000409416 FRG1Q14331 258 aaKnown RBP13.29□□□□□ -0.28
COL6A2-204ENST00000409416 CYP51A1Q16850 503 aa13.29□□□□□ -0.28
COL6A2-204ENST00000409416 ZNF648Q5T619 568 aaPredicted RBP13.29□□□□□ -0.28
COL6A2-204ENST00000409416 PTERQ96BW5 349 aa13.29□□□□□ -0.28
COL6A2-204ENST00000409416 RRN3Q9NYV6 651 aa13.29□□□□□ -0.28
COL6A2-204ENST00000409416 PTTG2Q9NZH5 202 aa13.29□□□□□ -0.28
COL6A2-204ENST00000409416 ATXN10Q9UBB4 475 aa13.29□□□□□ -0.28
COL6A2-204ENST00000409416 DMTF1Q9Y222 760 aa13.29□□□□□ -0.28
COL6A2-204ENST00000409416 TARM1B6A8C7 271 aa13.29□□□□□ -0.28
COL6A2-204ENST00000409416 SOCS2O14508 198 aa13.29□□□□□ -0.28
COL6A2-204ENST00000409416 CLASP2O75122 1294 aaKnown RBP13.29□□□□□ -0.28
COL6A2-204ENST00000409416 E2F6O75461 281 aa13.29□□□□□ -0.28
COL6A2-204ENST00000409416 S100BP04271 92 aaPredicted RBP13.29□□□□□ -0.28
COL6A2-204ENST00000409416 ATP6V1B2P21281 511 aa13.29□□□□□ -0.28
COL6A2-204ENST00000409416 XPAP23025 273 aaPredicted RBP13.29□□□□□ -0.28
COL6A2-204ENST00000409416 STK19P49842 368 aaPredicted RBP13.29□□□□□ -0.28
COL6A2-204ENST00000409416 RHDQ02161 417 aa13.29□□□□□ -0.28
COL6A2-204ENST00000409416 SEMA3AQ14563 771 aa13.29□□□□□ -0.28
COL6A2-204ENST00000409416 MBTPS1Q14703 1052 aa13.29□□□□□ -0.28
COL6A2-204ENST00000409416 PM20D1Q6GTS8 502 aa13.29□□□□□ -0.28
COL6A2-204ENST00000409416 PSAPL1Q6NUJ1 521 aa13.29□□□□□ -0.28
COL6A2-204ENST00000409416 FBXO22Q8NEZ5 403 aa13.29□□□□□ -0.28
COL6A2-204ENST00000409416 ING5Q8WYH8 240 aa13.29□□□□□ -0.28
COL6A2-204ENST00000409416 HAPLN3Q96S86 360 aa13.29□□□□□ -0.28
COL6A2-204ENST00000409416 CORO1BQ9BR76 489 aa13.29□□□□□ -0.28
COL6A2-204ENST00000409416 ASB8Q9H765 288 aa13.29□□□□□ -0.28
COL6A2-204ENST00000409416 MRPL40Q9NQ50 206 aaKnown RBP13.29□□□□□ -0.28
COL6A2-204ENST00000409416 BRWD1Q9NSI6 2320 aa13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms