RNA–Protein interactions for RNA: ENST00000406109.5

RPA3-204, Transcript of replication protein A3, humanhuman

TSL 3 BASIC

Gene RPA3, Length 434 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPA3-204ENST00000406109 PIM3Q86V86 326 aa6.18□□□□□ -1.42
RPA3-204ENST00000406109 ZSWIM9Q86XI8 627 aa6.18□□□□□ -1.42
RPA3-204ENST00000406109 NRROSQ86YC3 692 aa6.18□□□□□ -1.42
RPA3-204ENST00000406109 KATNAL2Q8IYT4 538 aa6.18□□□□□ -1.42
RPA3-204ENST00000406109 CACNA2D3Q8IZS8 1091 aa6.18□□□□□ -1.42
RPA3-204ENST00000406109 SYCE1Q8N0S2 351 aa6.18□□□□□ -1.42
RPA3-204ENST00000406109 BBS5Q8N3I7 341 aa6.18□□□□□ -1.42
RPA3-204ENST00000406109 ATPAF2Q8N5M1 289 aa6.18□□□□□ -1.42
RPA3-204ENST00000406109 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP6.18□□□□□ -1.42
RPA3-204ENST00000406109 RNF10Q8N5U6 811 aaKnown RBP6.18□□□□□ -1.42
RPA3-204ENST00000406109 IL22RA1Q8N6P7 574 aa6.18□□□□□ -1.42
RPA3-204ENST00000406109 PLD5Q8N7P1 536 aa6.18□□□□□ -1.42
RPA3-204ENST00000406109 BMPERQ8N8U9 685 aa6.18□□□□□ -1.42
RPA3-204ENST00000406109 TSEN2Q8NCE0 465 aaKnown RBP6.18□□□□□ -1.42
RPA3-204ENST00000406109 EXD1Q8NHP7 514 aa6.18□□□□□ -1.42
RPA3-204ENST00000406109 C9orf43Q8TAL5 461 aaPredicted RBP6.18□□□□□ -1.42
RPA3-204ENST00000406109 GPBAR1Q8TDU6 330 aa6.18□□□□□ -1.42
RPA3-204ENST00000406109 CXorf40AQ8TE69 158 aa6.18□□□□□ -1.42
RPA3-204ENST00000406109 KRT35Q92764 455 aa6.18□□□□□ -1.42
RPA3-204ENST00000406109 FAF2Q96CS3 445 aa6.18□□□□□ -1.42
RPA3-204ENST00000406109 CCDC74BQ96LY2 380 aa6.18□□□□□ -1.42
RPA3-204ENST00000406109 WDR92Q96MX6 357 aa6.18□□□□□ -1.42
RPA3-204ENST00000406109 GDAP1L1Q96MZ0 367 aa6.18□□□□□ -1.42
RPA3-204ENST00000406109 ZNF599Q96NL3 588 aa6.18□□□□□ -1.42
RPA3-204ENST00000406109 LGR4Q9BXB1 951 aa6.18□□□□□ -1.42
RPA3-204ENST00000406109 C1QTNF7Q9BXJ2 289 aa6.18□□□□□ -1.42
RPA3-204ENST00000406109 HEMGNQ9BXL5 484 aa6.18□□□□□ -1.42
RPA3-204ENST00000406109 OSBPL1AQ9BXW6 950 aa6.18□□□□□ -1.42
RPA3-204ENST00000406109 TSGA10Q9BZW7 698 aa6.18□□□□□ -1.42
RPA3-204ENST00000406109 LRRC4CQ9HCJ2 640 aa6.18□□□□□ -1.42
RPA3-204ENST00000406109 LZTFL1Q9NQ48 299 aa6.18□□□□□ -1.42
RPA3-204ENST00000406109 NPDC1Q9NQX5 325 aaPredicted RBP6.18□□□□□ -1.42
RPA3-204ENST00000406109 SPATS2LQ9NUQ6 558 aaKnown RBP6.18□□□□□ -1.42
RPA3-204ENST00000406109 RBM22Q9NW64 420 aaKnown RBP eCLIP6.18□□□□□ -1.42
RPA3-204ENST00000406109 OCIAD1Q9NX40 245 aa6.18□□□□□ -1.42
RPA3-204ENST00000406109 TMEM9Q9P0T7 183 aa6.18□□□□□ -1.42
RPA3-204ENST00000406109 SAE1Q9UBE0 346 aaPredicted RBP6.18□□□□□ -1.42
RPA3-204ENST00000406109 LHX3Q9UBR4 397 aa6.18□□□□□ -1.42
RPA3-204ENST00000406109 SPTBP11277 2137 aa6.17□□□□□ -1.42
RPA3-204ENST00000406109 SVILO95425 2214 aa6.17□□□□□ -1.42
RPA3-204ENST00000406109 PKDREJQ9NTG1 2253 aa6.17□□□□□ -1.42
RPA3-204ENST00000406109 LOC101059948A0A1B0GTJ6 334 aa6.17□□□□□ -1.42
RPA3-204ENST00000406109 TSPAN11A1L157 253 aa6.17□□□□□ -1.42
RPA3-204ENST00000406109 CCDC66A2RUB6 948 aa6.17□□□□□ -1.42
RPA3-204ENST00000406109 PRR19A6NJB7 356 aa6.17□□□□□ -1.42
RPA3-204ENST00000406109 ZNF891A8MT65 544 aaPredicted RBP6.17□□□□□ -1.42
RPA3-204ENST00000406109 ZNF487B1APH4 448 aa6.17□□□□□ -1.42
RPA3-204ENST00000406109 B4DGG1 531 aa6.17□□□□□ -1.42
RPA3-204ENST00000406109 MATN3O15232 486 aa6.17□□□□□ -1.42
RPA3-204ENST00000406109 PPM1DO15297 605 aa6.17□□□□□ -1.42
RPA3-204ENST00000406109 MFSD11O43934 449 aa6.17□□□□□ -1.42
RPA3-204ENST00000406109 PIGNO95427 931 aa6.17□□□□□ -1.42
RPA3-204ENST00000406109 FTCDO95954 541 aa6.17□□□□□ -1.42
RPA3-204ENST00000406109 TNFP01375 233 aa6.17□□□□□ -1.42
RPA3-204ENST00000406109 JCHAINP01591 159 aa6.17□□□□□ -1.42
RPA3-204ENST00000406109 HOXC4P09017 264 aaPredicted RBP6.17□□□□□ -1.42
RPA3-204ENST00000406109 PRKAR1AP10644 381 aa6.17□□□□□ -1.42
RPA3-204ENST00000406109 THRAP10827 490 aa6.17□□□□□ -1.42
RPA3-204ENST00000406109 PYGMP11217 842 aa6.17□□□□□ -1.42
RPA3-204ENST00000406109 NR1D1P20393 614 aa6.17□□□□□ -1.42
RPA3-204ENST00000406109 XPAP23025 273 aaPredicted RBP6.17□□□□□ -1.42
RPA3-204ENST00000406109 CCNCP24863 283 aa6.17□□□□□ -1.42
RPA3-204ENST00000406109 MPSTP25325 297 aa6.17□□□□□ -1.42
RPA3-204ENST00000406109 CTNNA2P26232 953 aa6.17□□□□□ -1.42
RPA3-204ENST00000406109 HTR1BP28222 390 aa6.17□□□□□ -1.42
RPA3-204ENST00000406109 CSF2RBP32927 897 aa6.17□□□□□ -1.42
RPA3-204ENST00000406109 CTNNA1P35221 906 aaKnown RBP6.17□□□□□ -1.42
RPA3-204ENST00000406109 MMP12P39900 470 aa6.17□□□□□ -1.42
RPA3-204ENST00000406109 GARSP41250 739 aaKnown RBP6.17□□□□□ -1.42
RPA3-204ENST00000406109 MMP13P45452 471 aa6.17□□□□□ -1.42
RPA3-204ENST00000406109 RGRP47804 291 aa6.17□□□□□ -1.42
RPA3-204ENST00000406109 MARCKSL1P49006 195 aa6.17□□□□□ -1.42
RPA3-204ENST00000406109 LIG3P49916 1009 aa6.17□□□□□ -1.42
RPA3-204ENST00000406109 ATP1A2P50993 1020 aa6.17□□□□□ -1.42
RPA3-204ENST00000406109 LIMK2P53671 638 aa6.17□□□□□ -1.42
RPA3-204ENST00000406109 MAZP56270 477 aaKnown RBP6.17□□□□□ -1.42
RPA3-204ENST00000406109 RWDD2BP57060 319 aa6.17□□□□□ -1.42
RPA3-204ENST00000406109 KIAA1024LP59773 190 aa6.17□□□□□ -1.42
RPA3-204ENST00000406109 MAXP61244 160 aa6.17□□□□□ -1.42
RPA3-204ENST00000406109 BCL2L1Q07817 233 aa6.17□□□□□ -1.42
RPA3-204ENST00000406109 NSUN2Q08J23 767 aaKnown RBP eCLIP6.17□□□□□ -1.42
RPA3-204ENST00000406109 GALNT2Q10471 571 aa6.17□□□□□ -1.42
RPA3-204ENST00000406109 AP1B1Q10567 949 aa6.17□□□□□ -1.42
RPA3-204ENST00000406109 MTM1Q13496 603 aa6.17□□□□□ -1.42
RPA3-204ENST00000406109 SQSTM1Q13501 440 aa6.17□□□□□ -1.42
RPA3-204ENST00000406109 ARHGEF7Q14155 803 aa6.17□□□□□ -1.42
RPA3-204ENST00000406109 TFDP2Q14188 446 aa6.17□□□□□ -1.42
RPA3-204ENST00000406109 ZNF235Q14590 738 aa6.17□□□□□ -1.42
RPA3-204ENST00000406109 UGP2Q16851 508 aa6.17□□□□□ -1.42
RPA3-204ENST00000406109 LACTB2Q53H82 288 aaPredicted RBP6.17□□□□□ -1.42
RPA3-204ENST00000406109 CFAP58Q5T655 872 aa6.17□□□□□ -1.42
RPA3-204ENST00000406109 TMCO4Q5TGY1 634 aa6.17□□□□□ -1.42
RPA3-204ENST00000406109 NKAIN2Q5VXU1 208 aa6.17□□□□□ -1.42
RPA3-204ENST00000406109 SLC9A4Q6AI14 798 aa6.17□□□□□ -1.42
RPA3-204ENST00000406109 CAPRIN2Q6IMN6 1127 aaKnown RBP6.17□□□□□ -1.42
RPA3-204ENST00000406109 TIGD7Q6NT04 549 aaPredicted RBP6.17□□□□□ -1.42
RPA3-204ENST00000406109 AADACL2Q6P093 401 aa6.17□□□□□ -1.42
RPA3-204ENST00000406109 BZW1Q7L1Q6 419 aaKnown RBP6.17□□□□□ -1.42
RPA3-204ENST00000406109 TIPARPQ7Z3E1 657 aaKnown RBP6.17□□□□□ -1.42
RPA3-204ENST00000406109 NT5DC3Q86UY8 548 aa6.17□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms