RNA–Protein interactions for RNA: ENST00000404909.5

RTN4-208, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 4,102 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-208ENST00000404909 COPS8Q99627 209 aa3.68□□□□□ -1.82
RTN4-208ENST00000404909 NMRAL1Q9HBL8 299 aa3.68□□□□□ -1.82
RTN4-208ENST00000404909 TAS2R13Q9NYV9 303 aa3.68□□□□□ -1.82
RTN4-208ENST00000404909 FAM8A1Q9UBU6 413 aa3.68□□□□□ -1.82
RTN4-208ENST00000404909 PRDM4Q9UKN5 801 aa3.68□□□□□ -1.82
RTN4-208ENST00000404909 BDP1A6H8Y1 2624 aa3.68□□□□□ -1.82
RTN4-208ENST00000404909 MYO15AQ9UKN7 3530 aa3.68□□□□□ -1.82
RTN4-208ENST00000404909 IGLON5A6NGN9 336 aa3.68□□□□□ -1.82
RTN4-208ENST00000404909 A6NNZ2 444 aa3.68□□□□□ -1.82
RTN4-208ENST00000404909 AREL1O15033 823 aa3.68□□□□□ -1.82
RTN4-208ENST00000404909 ADH1BP00325 375 aa3.68□□□□□ -1.82
RTN4-208ENST00000404909 ACADMP11310 421 aa3.68□□□□□ -1.82
RTN4-208ENST00000404909 PKMP14618 531 aaKnown RBP3.68□□□□□ -1.82
RTN4-208ENST00000404909 C5AR1P21730 350 aa3.68□□□□□ -1.82
RTN4-208ENST00000404909 PSMA3P25788 255 aa3.68□□□□□ -1.82
RTN4-208ENST00000404909 MAGEA12P43365 314 aa3.68□□□□□ -1.82
RTN4-208ENST00000404909 COPAP53621 1224 aa3.68□□□□□ -1.82
RTN4-208ENST00000404909 RPS14P62263 151 aaKnown RBP3.68□□□□□ -1.82
RTN4-208ENST00000404909 ITGA9Q13797 1035 aa3.68□□□□□ -1.82
RTN4-208ENST00000404909 ENPP2Q13822 863 aa3.68□□□□□ -1.82
RTN4-208ENST00000404909 CCINQ13939 588 aa3.68□□□□□ -1.82
RTN4-208ENST00000404909 MLF2Q15773 248 aaPredicted RBP3.68□□□□□ -1.82
RTN4-208ENST00000404909 TUBB8Q3ZCM7 444 aa3.68□□□□□ -1.82
RTN4-208ENST00000404909 GPR33Q49SQ1 333 aa3.68□□□□□ -1.82
RTN4-208ENST00000404909 TMEM31Q5JXX7 168 aa3.68□□□□□ -1.82
RTN4-208ENST00000404909 CTSL3PQ5NE16 218 aa3.68□□□□□ -1.82
RTN4-208ENST00000404909 ZNF648Q5T619 568 aaPredicted RBP3.68□□□□□ -1.82
RTN4-208ENST00000404909 PIP5KL1Q5T9C9 394 aa3.68□□□□□ -1.82
RTN4-208ENST00000404909 ZDHHC20Q5W0Z9 365 aa3.68□□□□□ -1.82
RTN4-208ENST00000404909 NAPRTQ6XQN6 538 aa3.68□□□□□ -1.82
RTN4-208ENST00000404909 TRMT11Q7Z4G4 463 aaKnown RBP3.68□□□□□ -1.82
RTN4-208ENST00000404909 GALNT7Q86SF2 657 aa3.68□□□□□ -1.82
RTN4-208ENST00000404909 CENPLQ8N0S6 344 aaPredicted RBP3.68□□□□□ -1.82
RTN4-208ENST00000404909 RBFAQ8N0V3 343 aa3.68□□□□□ -1.82
RTN4-208ENST00000404909 PGBD3Q8N328 593 aa3.68□□□□□ -1.82
RTN4-208ENST00000404909 SIDT2Q8NBJ9 832 aaKnown RBP3.68□□□□□ -1.82
RTN4-208ENST00000404909 PPP1R14CQ8TAE6 165 aa3.68□□□□□ -1.82
RTN4-208ENST00000404909 HEXDCQ8WVB3 486 aa3.68□□□□□ -1.82
RTN4-208ENST00000404909 ANKRD49Q8WVL7 239 aa3.68□□□□□ -1.82
RTN4-208ENST00000404909 HMGB4Q8WW32 186 aa3.68□□□□□ -1.82
RTN4-208ENST00000404909 CKAP2Q8WWK9 683 aa3.68□□□□□ -1.82
RTN4-208ENST00000404909 KLK6Q92876 244 aa3.68□□□□□ -1.82
RTN4-208ENST00000404909 ISL2Q96A47 359 aa3.68□□□□□ -1.82
RTN4-208ENST00000404909 SIPA1Q96FS4 1042 aa3.68□□□□□ -1.82
RTN4-208ENST00000404909 DCUN1D1Q96GG9 259 aa3.68□□□□□ -1.82
RTN4-208ENST00000404909 GPR21Q99679 349 aa3.68□□□□□ -1.82
RTN4-208ENST00000404909 GABRG3Q99928 467 aa3.68□□□□□ -1.82
RTN4-208ENST00000404909 AARSD1Q9BTE6 412 aaKnown RBP3.68□□□□□ -1.82
RTN4-208ENST00000404909 TRPM6Q9BX84 2022 aa3.68□□□□□ -1.82
RTN4-208ENST00000404909 HDAC8Q9BY41 377 aa3.68□□□□□ -1.82
RTN4-208ENST00000404909 OSBPL6Q9BZF3 934 aa3.68□□□□□ -1.82
RTN4-208ENST00000404909 GALPQ9UBC7 116 aa3.68□□□□□ -1.82
RTN4-208ENST00000404909 PRSS21Q9Y6M0 314 aa3.68□□□□□ -1.82
RTN4-208ENST00000404909 KIAA1549LQ6ZVL6 1849 aa3.68□□□□□ -1.82
RTN4-208ENST00000404909 TCRBV21S2A2A0A5A6 115 aa3.68□□□□□ -1.82
RTN4-208ENST00000404909 GMNCA6NCL1 334 aa3.68□□□□□ -1.82
RTN4-208ENST00000404909 LOC730098B7Z3J9 87 aa3.68□□□□□ -1.82
RTN4-208ENST00000404909 K7ESM1 405 aa3.68□□□□□ -1.82
RTN4-208ENST00000404909 TK2O00142 265 aa3.68□□□□□ -1.82
RTN4-208ENST00000404909 PLIN3O60664 434 aa3.68□□□□□ -1.82
RTN4-208ENST00000404909 SHOX2O60902 331 aaPredicted RBP3.68□□□□□ -1.82
RTN4-208ENST00000404909 VPS26AO75436 327 aa3.68□□□□□ -1.82
RTN4-208ENST00000404909 SLC25A14O95258 325 aaPredicted RBP3.68□□□□□ -1.82
RTN4-208ENST00000404909 ESR1P03372 595 aa3.68□□□□□ -1.82
RTN4-208ENST00000404909 GLULP15104 373 aa3.68□□□□□ -1.82
RTN4-208ENST00000404909 BGNP21810 368 aa3.68□□□□□ -1.82
RTN4-208ENST00000404909 FDXRP22570 491 aa3.68□□□□□ -1.82
RTN4-208ENST00000404909 MAT2AP31153 395 aaKnown RBP3.68□□□□□ -1.82
RTN4-208ENST00000404909 ETV4P43268 484 aa3.68□□□□□ -1.82
RTN4-208ENST00000404909 POLD2P49005 469 aa3.68□□□□□ -1.82
RTN4-208ENST00000404909 SLC18A1P54219 525 aa3.68□□□□□ -1.82
RTN4-208ENST00000404909 MRPS21P82921 87 aaKnown RBP3.68□□□□□ -1.82
RTN4-208ENST00000404909 GABPB1Q06547 395 aaPredicted RBP3.68□□□□□ -1.82
RTN4-208ENST00000404909 DLG1Q12959 904 aa3.68□□□□□ -1.82
RTN4-208ENST00000404909 FAM83EQ2M2I3 478 aa3.68□□□□□ -1.82
RTN4-208ENST00000404909 PUS10Q3MIT2 529 aaKnown RBP3.68□□□□□ -1.82
RTN4-208ENST00000404909 TTC31Q49AM3 519 aaPredicted RBP3.68□□□□□ -1.82
RTN4-208ENST00000404909 FBXO43Q4G163 708 aa3.68□□□□□ -1.82
RTN4-208ENST00000404909 GPRC6AQ5T6X5 926 aa3.68□□□□□ -1.82
RTN4-208ENST00000404909 AGBL4Q5VU57 503 aa3.68□□□□□ -1.82
RTN4-208ENST00000404909 SEL1L3Q68CR1 1132 aa3.68□□□□□ -1.82
RTN4-208ENST00000404909 RAET1GQ6H3X3 334 aa3.68□□□□□ -1.82
RTN4-208ENST00000404909 PAQR3Q6TCH7 311 aa3.68□□□□□ -1.82
RTN4-208ENST00000404909 TMEM207Q6UWW9 146 aa3.68□□□□□ -1.82
RTN4-208ENST00000404909 TMEM92Q6UXU6 159 aa3.68□□□□□ -1.82
RTN4-208ENST00000404909 KYAT3Q6YP21 454 aaKnown RBP3.68□□□□□ -1.82
RTN4-208ENST00000404909 ZCCHC23Q6ZST2 131 aa3.68□□□□□ -1.82
RTN4-208ENST00000404909 CPLX4Q7Z7G2 160 aa3.68□□□□□ -1.82
RTN4-208ENST00000404909 TRIM74Q86UV6 250 aa3.68□□□□□ -1.82
RTN4-208ENST00000404909 NUDCD3Q8IVD9 361 aa3.68□□□□□ -1.82
RTN4-208ENST00000404909 ADHFE1Q8IWW8 467 aa3.68□□□□□ -1.82
RTN4-208ENST00000404909 PELI3Q8N2H9 469 aa3.68□□□□□ -1.82
RTN4-208ENST00000404909 BCAS4Q8TDM0 211 aa3.68□□□□□ -1.82
RTN4-208ENST00000404909 EXT2Q93063 718 aa3.68□□□□□ -1.82
RTN4-208ENST00000404909 CENPTQ96BT3 561 aa3.68□□□□□ -1.82
RTN4-208ENST00000404909 NUS1Q96E22 293 aa3.68□□□□□ -1.82
RTN4-208ENST00000404909 CHMP6Q96FZ7 201 aa3.68□□□□□ -1.82
RTN4-208ENST00000404909 ZSCAN5AQ9BUG6 496 aa3.68□□□□□ -1.82
RTN4-208ENST00000404909 ACSS2Q9NR19 701 aa3.68□□□□□ -1.82
RTN4-208ENST00000404909 ARHGEF3Q9NR81 526 aa3.68□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms