RNA–Protein interactions for RNA: ENST00000397204.8

CAPN3-208, Transcript of calpain 3, humanhuman

TSL 1 (best) BASIC

Gene CAPN3, Length 1,237 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-208ENST00000397204 IYDQ6PHW0 289 aa8.69□□□□□ -1.02
CAPN3-208ENST00000397204 TMCO3Q6UWJ1 677 aa8.69□□□□□ -1.02
CAPN3-208ENST00000397204 CLEC18BQ6UXF7 455 aa8.69□□□□□ -1.02
CAPN3-208ENST00000397204 POLNQ7Z5Q5 900 aa8.69□□□□□ -1.02
CAPN3-208ENST00000397204 GALNT13Q8IUC8 556 aa8.69□□□□□ -1.02
CAPN3-208ENST00000397204 TP53INP2Q8IXH6 220 aa8.69□□□□□ -1.02
CAPN3-208ENST00000397204 VWA5B2Q8N398 1253 aa8.69□□□□□ -1.02
CAPN3-208ENST00000397204 CLEC18CQ8NCF0 446 aa8.69□□□□□ -1.02
CAPN3-208ENST00000397204 SLC37A2Q8TED4 501 aa8.69□□□□□ -1.02
CAPN3-208ENST00000397204 RTP4Q96DX8 246 aa8.69□□□□□ -1.02
CAPN3-208ENST00000397204 COX14Q96I36 57 aa8.69□□□□□ -1.02
CAPN3-208ENST00000397204 PEBP4Q96S96 227 aa8.69□□□□□ -1.02
CAPN3-208ENST00000397204 EPN3Q9H201 632 aa8.69□□□□□ -1.02
CAPN3-208ENST00000397204 EPB41L1Q9H4G0 881 aa8.69□□□□□ -1.02
CAPN3-208ENST00000397204 MRPL47Q9HD33 250 aaKnown RBP8.69□□□□□ -1.02
CAPN3-208ENST00000397204 SARS2Q9NP81 518 aaKnown RBP8.69□□□□□ -1.02
CAPN3-208ENST00000397204 GOLGA6AQ9NYA3 693 aa8.69□□□□□ -1.02
CAPN3-208ENST00000397204 TMEM9Q9P0T7 183 aa8.69□□□□□ -1.02
CAPN3-208ENST00000397204 ZNHIT2Q9UHR6 403 aa8.69□□□□□ -1.02
CAPN3-208ENST00000397204 TMEM184BQ9Y519 407 aaPredicted RBP8.69□□□□□ -1.02
CAPN3-208ENST00000397204 HRH3Q9Y5N1 445 aa8.69□□□□□ -1.02
CAPN3-208ENST00000397204 SDK2Q58EX2 2172 aa8.69□□□□□ -1.02
CAPN3-208ENST00000397204 MYO9AB2RTY4 2548 aa8.69□□□□□ -1.02
CAPN3-208ENST00000397204 LOC101059948A0A1B0GTJ6 334 aa8.68□□□□□ -1.02
CAPN3-208ENST00000397204 OR5K4A6NMS3 321 aa8.68□□□□□ -1.02
CAPN3-208ENST00000397204 A8MU76 341 aa8.68□□□□□ -1.02
CAPN3-208ENST00000397204 TMCO5BA8MYB1 307 aa8.68□□□□□ -1.02
CAPN3-208ENST00000397204 POLR1CO15160 346 aaPredicted RBP8.68□□□□□ -1.02
CAPN3-208ENST00000397204 SOD1P00441 154 aa8.68□□□□□ -1.02
CAPN3-208ENST00000397204 CTPS1P17812 591 aa8.68□□□□□ -1.02
CAPN3-208ENST00000397204 AMPD1P23109 780 aa8.68□□□□□ -1.02
CAPN3-208ENST00000397204 MMP13P45452 471 aa8.68□□□□□ -1.02
CAPN3-208ENST00000397204 PPM1FP49593 454 aaPredicted RBP8.68□□□□□ -1.02
CAPN3-208ENST00000397204 EPHA4P54764 986 aa8.68□□□□□ -1.02
CAPN3-208ENST00000397204 HHEXQ03014 270 aa8.68□□□□□ -1.02
CAPN3-208ENST00000397204 SEPT6Q14141 434 aa8.68□□□□□ -1.02
CAPN3-208ENST00000397204 PTPRRQ15256 657 aa8.68□□□□□ -1.02
CAPN3-208ENST00000397204 IGFBP7Q16270 282 aa8.68□□□□□ -1.02
CAPN3-208ENST00000397204 LRRC66Q68CR7 880 aa8.68□□□□□ -1.02
CAPN3-208ENST00000397204 DOK6Q6PKX4 331 aa8.68□□□□□ -1.02
CAPN3-208ENST00000397204 MARK2Q7KZI7 788 aaKnown RBP8.68□□□□□ -1.02
CAPN3-208ENST00000397204 TIPARPQ7Z3E1 657 aaKnown RBP8.68□□□□□ -1.02
CAPN3-208ENST00000397204 KDELC2Q7Z4H8 507 aa8.68□□□□□ -1.02
CAPN3-208ENST00000397204 TSPAN33Q86UF1 283 aa8.68□□□□□ -1.02
CAPN3-208ENST00000397204 TEX26Q8N6G2 289 aa8.68□□□□□ -1.02
CAPN3-208ENST00000397204 AVL9Q8NBF6 648 aa8.68□□□□□ -1.02
CAPN3-208ENST00000397204 NCSTNQ92542 709 aa8.68□□□□□ -1.02
CAPN3-208ENST00000397204 SCAMP4Q969E2 229 aa8.68□□□□□ -1.02
CAPN3-208ENST00000397204 ABHD17AQ96GS6 310 aa8.68□□□□□ -1.02
CAPN3-208ENST00000397204 LDHAL6BQ9BYZ2 381 aaPredicted RBP8.68□□□□□ -1.02
CAPN3-208ENST00000397204 STN1Q9H668 368 aaKnown RBP8.68□□□□□ -1.02
CAPN3-208ENST00000397204 RMI1Q9H9A7 625 aa8.68□□□□□ -1.02
CAPN3-208ENST00000397204 ZNF71Q9NQZ8 489 aaPredicted RBP8.68□□□□□ -1.02
CAPN3-208ENST00000397204 ETNK2Q9NVF9 386 aa8.68□□□□□ -1.02
CAPN3-208ENST00000397204 CUEDC1Q9NWM3 386 aaPredicted RBP8.68□□□□□ -1.02
CAPN3-208ENST00000397204 VPS18Q9P253 973 aa8.68□□□□□ -1.02
CAPN3-208ENST00000397204 CD84Q9UIB8 345 aa8.68□□□□□ -1.02
CAPN3-208ENST00000397204 DNPEPQ9ULA0 475 aa8.68□□□□□ -1.02
CAPN3-208ENST00000397204 KCTD3Q9Y597 815 aa8.68□□□□□ -1.02
CAPN3-208ENST00000397204 SCINQ9Y6U3 715 aa8.68□□□□□ -1.02
CAPN3-208ENST00000397204 LRP4O75096 1905 aa8.68□□□□□ -1.02
CAPN3-208ENST00000397204 CREBBPQ92793 2442 aa8.68□□□□□ -1.02
CAPN3-208ENST00000397204 KIR2DS5A0A0G2JLQ3 304 aa8.67□□□□□ -1.02
CAPN3-208ENST00000397204 A0A0G2JNG1 304 aa8.67□□□□□ -1.02
CAPN3-208ENST00000397204 A0A0J9YYE9 177 aa8.67□□□□□ -1.02
CAPN3-208ENST00000397204 RGSL1A5PLK6 1076 aa8.67□□□□□ -1.02
CAPN3-208ENST00000397204 KIR2DS3K7RE56 304 aa8.67□□□□□ -1.02
CAPN3-208ENST00000397204 FZD6O60353 706 aa8.67□□□□□ -1.02
CAPN3-208ENST00000397204 STK17BO94768 372 aa8.67□□□□□ -1.02
CAPN3-208ENST00000397204 MAP3K6O95382 1288 aa8.67□□□□□ -1.02
CAPN3-208ENST00000397204 ASMTLO95671 621 aa8.67□□□□□ -1.02
CAPN3-208ENST00000397204 EML2O95834 649 aa8.67□□□□□ -1.02
CAPN3-208ENST00000397204 RECKO95980 971 aa8.67□□□□□ -1.02
CAPN3-208ENST00000397204 TRBC1P01850 177 aa8.67□□□□□ -1.02
CAPN3-208ENST00000397204 PDHA1P08559 390 aa8.67□□□□□ -1.02
CAPN3-208ENST00000397204 MYBL1P10243 752 aa8.67□□□□□ -1.02
CAPN3-208ENST00000397204 SLC2A4P14672 509 aa8.67□□□□□ -1.02
CAPN3-208ENST00000397204 TCN2P20062 427 aa8.67□□□□□ -1.02
CAPN3-208ENST00000397204 SERPINB6P35237 376 aa8.67□□□□□ -1.02
CAPN3-208ENST00000397204 STC1P52823 247 aa8.67□□□□□ -1.02
CAPN3-208ENST00000397204 EPHB1P54762 984 aa8.67□□□□□ -1.02
CAPN3-208ENST00000397204 MAXP61244 160 aa8.67□□□□□ -1.02
CAPN3-208ENST00000397204 RPL26P61254 145 aaKnown RBP8.67□□□□□ -1.02
CAPN3-208ENST00000397204 MYL5Q02045 173 aa8.67□□□□□ -1.02
CAPN3-208ENST00000397204 ITKQ08881 620 aa8.67□□□□□ -1.02
CAPN3-208ENST00000397204 CDC20Q12834 499 aa8.67□□□□□ -1.02
CAPN3-208ENST00000397204 KLRB1Q12918 225 aa8.67□□□□□ -1.02
CAPN3-208ENST00000397204 MAP7Q14244 749 aa8.67□□□□□ -1.02
CAPN3-208ENST00000397204 KIR2DS5Q14953 304 aa8.67□□□□□ -1.02
CAPN3-208ENST00000397204 DEFB109BQ30KR1 87 aa8.67□□□□□ -1.02
CAPN3-208ENST00000397204 SNAP47Q5SQN1 464 aa8.67□□□□□ -1.02
CAPN3-208ENST00000397204 RBM43Q6ZSC3 357 aaKnown RBP8.67□□□□□ -1.02
CAPN3-208ENST00000397204 RFLNAQ6ZTI6 216 aa8.67□□□□□ -1.02
CAPN3-208ENST00000397204 APTXQ7Z2E3 356 aaKnown RBP8.67□□□□□ -1.02
CAPN3-208ENST00000397204 SLC9B2Q86UD5 537 aa8.67□□□□□ -1.02
CAPN3-208ENST00000397204 PLXDC1Q8IUK5 500 aa8.67□□□□□ -1.02
CAPN3-208ENST00000397204 DEPDC4Q8N2C3 294 aa8.67□□□□□ -1.02
CAPN3-208ENST00000397204 ATPAF2Q8N5M1 289 aa8.67□□□□□ -1.02
CAPN3-208ENST00000397204 ESX1Q8N693 406 aa8.67□□□□□ -1.02
CAPN3-208ENST00000397204 TEKT4Q8WW24 435 aa8.67□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 59.5 ms