RNA–Protein interactions for RNA: ENST00000395060.5

CLIP2-203, Transcript of CAP-Gly domain containing linker protein 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLIP2, Length 3,141 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2-203ENST00000395060 IFITM3Q01628 133 aa14.23□□□□□ -0.13
CLIP2-203ENST00000395060 RBBP7Q16576 425 aa14.23□□□□□ -0.13
CLIP2-203ENST00000395060 PRAMEF19Q5SWL8 479 aa14.23□□□□□ -0.13
CLIP2-203ENST00000395060 DPP9Q86TI2 863 aa14.23□□□□□ -0.13
CLIP2-203ENST00000395060 ARHGAP12Q8IWW6 846 aa14.23□□□□□ -0.13
CLIP2-203ENST00000395060 CDYL2Q8N8U2 506 aa14.23□□□□□ -0.13
CLIP2-203ENST00000395060 FNDC5Q8NAU1 212 aa14.23□□□□□ -0.13
CLIP2-203ENST00000395060 LPPQ93052 612 aa14.23□□□□□ -0.13
CLIP2-203ENST00000395060 CCDC126Q96EE4 140 aa14.23□□□□□ -0.13
CLIP2-203ENST00000395060 NRBF2Q96F24 287 aa14.23□□□□□ -0.13
CLIP2-203ENST00000395060 NSMCE2Q96MF7 247 aa14.23□□□□□ -0.13
CLIP2-203ENST00000395060 TREX1Q9NSU2 369 aa14.23□□□□□ -0.13
CLIP2-203ENST00000395060 RIC8BQ9NVN3 520 aa14.23□□□□□ -0.13
CLIP2-203ENST00000395060 CPQQ9Y646 472 aa14.23□□□□□ -0.13
CLIP2-203ENST00000395060 H0Y858 1186 aa14.22□□□□□ -0.13
CLIP2-203ENST00000395060 ITGB6P18564 788 aa14.22□□□□□ -0.13
CLIP2-203ENST00000395060 HRH2P25021 359 aa14.22□□□□□ -0.13
CLIP2-203ENST00000395060 PIK3CGP48736 1102 aa14.22□□□□□ -0.13
CLIP2-203ENST00000395060 TPTEP56180 551 aa14.22□□□□□ -0.13
CLIP2-203ENST00000395060 SLC13A2Q13183 592 aa14.22□□□□□ -0.13
CLIP2-203ENST00000395060 GALNT3Q14435 633 aa14.22□□□□□ -0.13
CLIP2-203ENST00000395060 DCAF4L1Q3SXM0 396 aa14.22□□□□□ -0.13
CLIP2-203ENST00000395060 SDHAF4Q5VUM1 108 aa14.22□□□□□ -0.13
CLIP2-203ENST00000395060 C14orf80Q86SX3 495 aa14.22□□□□□ -0.13
CLIP2-203ENST00000395060 CILP2Q8IUL8 1156 aa14.22□□□□□ -0.13
CLIP2-203ENST00000395060 SLC22A9Q8IVM8 553 aa14.22□□□□□ -0.13
CLIP2-203ENST00000395060 CNTN4Q8IWV2 1026 aa14.22□□□□□ -0.13
CLIP2-203ENST00000395060 OR13C4Q8NGS5 318 aa14.22□□□□□ -0.13
CLIP2-203ENST00000395060 OR13J1Q8NGT2 312 aa14.22□□□□□ -0.13
CLIP2-203ENST00000395060 NDNFQ8TB73 568 aa14.22□□□□□ -0.13
CLIP2-203ENST00000395060 CNIH3Q8TBE1 160 aa14.22□□□□□ -0.13
CLIP2-203ENST00000395060 CASP10Q92851 521 aa14.22□□□□□ -0.13
CLIP2-203ENST00000395060 FCRL2Q96LA5 508 aaPredicted RBP14.22□□□□□ -0.13
CLIP2-203ENST00000395060 VAT1Q99536 393 aa14.22□□□□□ -0.13
CLIP2-203ENST00000395060 RHNO1Q9BSD3 238 aa14.22□□□□□ -0.13
CLIP2-203ENST00000395060 C16orf70Q9BSU1 422 aa14.22□□□□□ -0.13
CLIP2-203ENST00000395060 TLR9Q9NR96 1032 aa14.22□□□□□ -0.13
CLIP2-203ENST00000395060 KLQ9UEF7 1012 aa14.22□□□□□ -0.13
CLIP2-203ENST00000395060 PCDHA9Q9Y5H5 950 aa14.22□□□□□ -0.13
CLIP2-203ENST00000395060 NRCAMQ92823 1304 aa14.22□□□□□ -0.13
CLIP2-203ENST00000395060 HS6ST1O60243 411 aa14.22□□□□□ -0.13
CLIP2-203ENST00000395060 KATNA1O75449 491 aa14.22□□□□□ -0.13
CLIP2-203ENST00000395060 PAGE1O75459 146 aa14.22□□□□□ -0.13
CLIP2-203ENST00000395060 THRBP10828 461 aa14.22□□□□□ -0.13
CLIP2-203ENST00000395060 MAP2K4P45985 399 aa14.22□□□□□ -0.13
CLIP2-203ENST00000395060 SEPHS1P49903 392 aa14.22□□□□□ -0.13
CLIP2-203ENST00000395060 GEMP55040 296 aa14.22□□□□□ -0.13
CLIP2-203ENST00000395060 TSNQ15631 228 aaKnown RBP14.22□□□□□ -0.13
CLIP2-203ENST00000395060 SV2CQ496J9 727 aa14.22□□□□□ -0.13
CLIP2-203ENST00000395060 ENPP6Q6UWR7 440 aa14.22□□□□□ -0.13
CLIP2-203ENST00000395060 CIR1Q86X95 450 aaPredicted RBP14.22□□□□□ -0.13
CLIP2-203ENST00000395060 DCP1BQ8IZD4 617 aaKnown RBP14.22□□□□□ -0.13
CLIP2-203ENST00000395060 SPARTQ8N0X7 666 aa14.22□□□□□ -0.13
CLIP2-203ENST00000395060 PACRGLQ8N7B6 248 aa14.22□□□□□ -0.13
CLIP2-203ENST00000395060 SENP8Q96LD8 212 aa14.22□□□□□ -0.13
CLIP2-203ENST00000395060 BDH2Q9BUT1 245 aa14.22□□□□□ -0.13
CLIP2-203ENST00000395060 ALOXE3Q9BYJ1 711 aa14.22□□□□□ -0.13
CLIP2-203ENST00000395060 CCDC68Q9H2F9 335 aa14.22□□□□□ -0.13
CLIP2-203ENST00000395060 MARCH7Q9H992 704 aa14.22□□□□□ -0.13
CLIP2-203ENST00000395060 PCDHGA11Q9Y5H2 935 aa14.22□□□□□ -0.13
CLIP2-203ENST00000395060 GMNNO75496 209 aa14.21□□□□□ -0.13
CLIP2-203ENST00000395060 SLC10A7Q0GE19 358 aa14.21□□□□□ -0.13
CLIP2-203ENST00000395060 BNIP2Q12982 314 aa14.21□□□□□ -0.13
CLIP2-203ENST00000395060 BLOC1S3Q6QNY0 202 aa14.21□□□□□ -0.13
CLIP2-203ENST00000395060 RAB44Q7Z6P3 723 aaPredicted RBP14.21□□□□□ -0.13
CLIP2-203ENST00000395060 ITFG1Q8TB96 612 aa14.21□□□□□ -0.13
CLIP2-203ENST00000395060 FRS2Q8WU20 508 aa14.21□□□□□ -0.13
CLIP2-203ENST00000395060 TRUB1Q8WWH5 349 aaKnown RBP14.21□□□□□ -0.13
CLIP2-203ENST00000395060 DUS3LQ96G46 650 aaKnown RBP14.21□□□□□ -0.13
CLIP2-203ENST00000395060 ALPK1Q96QP1 1244 aa14.21□□□□□ -0.13
CLIP2-203ENST00000395060 DOK1Q99704 481 aa14.21□□□□□ -0.13
CLIP2-203ENST00000395060 MYOCQ99972 504 aa14.21□□□□□ -0.13
CLIP2-203ENST00000395060 MROH8Q9H579 483 aa14.21□□□□□ -0.13
CLIP2-203ENST00000395060 WDR70Q9NW82 654 aa14.21□□□□□ -0.13
CLIP2-203ENST00000395060 ABCD2Q9UBJ2 740 aa14.21□□□□□ -0.13
CLIP2-203ENST00000395060 GNPTGQ9UJJ9 305 aa14.21□□□□□ -0.13
CLIP2-203ENST00000395060 IKZF3Q9UKT9 509 aa14.21□□□□□ -0.13
CLIP2-203ENST00000395060 TRIM64CA6NLI5 447 aa14.21□□□□□ -0.13
CLIP2-203ENST00000395060 CDC7O00311 574 aa14.21□□□□□ -0.13
CLIP2-203ENST00000395060 PDHXO00330 501 aa14.21□□□□□ -0.13
CLIP2-203ENST00000395060 E2F6O75461 281 aa14.21□□□□□ -0.13
CLIP2-203ENST00000395060 NADKO95544 446 aaPredicted RBP14.21□□□□□ -0.13
CLIP2-203ENST00000395060 HSD17B1P14061 328 aa14.21□□□□□ -0.13
CLIP2-203ENST00000395060 IL12AP29459 219 aa14.21□□□□□ -0.13
CLIP2-203ENST00000395060 FMO4P31512 558 aa14.21□□□□□ -0.13
CLIP2-203ENST00000395060 ACADVLP49748 655 aa14.21□□□□□ -0.13
CLIP2-203ENST00000395060 SERPINH1P50454 418 aaKnown RBP14.21□□□□□ -0.13
CLIP2-203ENST00000395060 IHHQ14623 411 aa14.21□□□□□ -0.13
CLIP2-203ENST00000395060 KYAT1Q16773 422 aa14.21□□□□□ -0.13
CLIP2-203ENST00000395060 KIAA0930Q6ICG6 404 aaPredicted RBP14.21□□□□□ -0.13
CLIP2-203ENST00000395060 TAPT1Q6NXT6 567 aa14.21□□□□□ -0.13
CLIP2-203ENST00000395060 MILR1Q7Z6M3 343 aa14.21□□□□□ -0.13
CLIP2-203ENST00000395060 C8orf59Q8N0T1 100 aaPredicted RBP14.21□□□□□ -0.13
CLIP2-203ENST00000395060 DTWD1Q8N5C7 304 aa14.21□□□□□ -0.13
CLIP2-203ENST00000395060 MINDY1Q8N5J2 469 aa14.21□□□□□ -0.13
CLIP2-203ENST00000395060 GPRC5AQ8NFJ5 357 aa14.21□□□□□ -0.13
CLIP2-203ENST00000395060 SH3YL1Q96HL8 342 aaPredicted RBP14.21□□□□□ -0.13
CLIP2-203ENST00000395060 UBXN10Q96LJ8 280 aa14.21□□□□□ -0.13
CLIP2-203ENST00000395060 FCRL5Q96RD9 977 aa14.21□□□□□ -0.13
CLIP2-203ENST00000395060 CARS2Q9HA77 564 aaKnown RBP14.21□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms