RNA–Protein interactions for RNA: ENST00000393077.2

VTI1A-201, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

APPRIS P1 TSL 2 BASIC

Gene VTI1A, Length 4,131 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-201ENST00000393077 KCNH4Q9UQ05 1017 aa7.59□□□□□ -1.19
VTI1A-201ENST00000393077 PCDHB12Q9Y5F1 795 aa7.59□□□□□ -1.19
VTI1A-201ENST00000393077 TTLL8A6PVC2 850 aa7.59□□□□□ -1.19
VTI1A-201ENST00000393077 C2orf74A8MZ97 194 aa7.59□□□□□ -1.19
VTI1A-201ENST00000393077 SHOXO15266 292 aa7.59□□□□□ -1.19
VTI1A-201ENST00000393077 PRPSAP2O60256 369 aa7.59□□□□□ -1.19
VTI1A-201ENST00000393077 ZNF780AO75290 641 aaPredicted RBP7.59□□□□□ -1.19
VTI1A-201ENST00000393077 TADA2AO75478 443 aa7.59□□□□□ -1.19
VTI1A-201ENST00000393077 FTH1P02794 183 aa7.59□□□□□ -1.19
VTI1A-201ENST00000393077 CAP2P40123 477 aa7.59□□□□□ -1.19
VTI1A-201ENST00000393077 PTPN5P54829 565 aa7.59□□□□□ -1.19
VTI1A-201ENST00000393077 CYP4F8P98187 520 aa7.59□□□□□ -1.19
VTI1A-201ENST00000393077 DMP1Q13316 513 aaPredicted RBP7.59□□□□□ -1.19
VTI1A-201ENST00000393077 MADCAM1Q13477 382 aa7.59□□□□□ -1.19
VTI1A-201ENST00000393077 CLEC16AQ2KHT3 1053 aa7.59□□□□□ -1.19
VTI1A-201ENST00000393077 BCL7AQ4VC05 210 aa7.59□□□□□ -1.19
VTI1A-201ENST00000393077 NBPF12Q5TAG4 269 aaPredicted RBP7.59□□□□□ -1.19
VTI1A-201ENST00000393077 SHEQ5VZ18 495 aa7.59□□□□□ -1.19
VTI1A-201ENST00000393077 RAB44Q7Z6P3 723 aaPredicted RBP7.59□□□□□ -1.19
VTI1A-201ENST00000393077 TFAP2DQ7Z6R9 452 aa7.59□□□□□ -1.19
VTI1A-201ENST00000393077 STRA8Q7Z7C7 330 aa7.59□□□□□ -1.19
VTI1A-201ENST00000393077 RIOX2Q8IUF8 465 aa7.59□□□□□ -1.19
VTI1A-201ENST00000393077 LINC00518Q8N0U6 118 aa7.59□□□□□ -1.19
VTI1A-201ENST00000393077 CPA6Q8N4T0 437 aa7.59□□□□□ -1.19
VTI1A-201ENST00000393077 GLB1L3Q8NCI6 653 aaPredicted RBP7.59□□□□□ -1.19
VTI1A-201ENST00000393077 FAM162AQ96A26 154 aa7.59□□□□□ -1.19
VTI1A-201ENST00000393077 FYTTD1Q96QD9 318 aaKnown RBP7.59□□□□□ -1.19
VTI1A-201ENST00000393077 NAT9Q9BTE0 207 aa7.59□□□□□ -1.19
VTI1A-201ENST00000393077 KCNH7Q9NS40 1196 aa7.59□□□□□ -1.19
VTI1A-201ENST00000393077 METTL21EPA6NDL7 271 aa7.59□□□□□ -1.2
VTI1A-201ENST00000393077 AGAP5A6NIR3 686 aa7.59□□□□□ -1.2
VTI1A-201ENST00000393077 AQP12BA6NM10 295 aa7.59□□□□□ -1.2
VTI1A-201ENST00000393077 WRBO00258 174 aa7.59□□□□□ -1.2
VTI1A-201ENST00000393077 ZBTB14O43829 449 aa7.59□□□□□ -1.2
VTI1A-201ENST00000393077 ONECUT3O60422 494 aaPredicted RBP7.59□□□□□ -1.2
VTI1A-201ENST00000393077 RBP1P09455 135 aa7.59□□□□□ -1.2
VTI1A-201ENST00000393077 CYP2A6P11509 494 aaPredicted RBP7.59□□□□□ -1.2
VTI1A-201ENST00000393077 BMP2P12643 396 aa7.59□□□□□ -1.2
VTI1A-201ENST00000393077 KLRC2P26717 231 aa7.59□□□□□ -1.2
VTI1A-201ENST00000393077 MAOBP27338 520 aa7.59□□□□□ -1.2
VTI1A-201ENST00000393077 HTR3AP46098 478 aa7.59□□□□□ -1.2
VTI1A-201ENST00000393077 ZNF81P51508 661 aa7.59□□□□□ -1.2
VTI1A-201ENST00000393077 CAPZA1P52907 286 aa7.59□□□□□ -1.2
VTI1A-201ENST00000393077 CTAG1AP78358 180 aa7.59□□□□□ -1.2
VTI1A-201ENST00000393077 FUT2Q10981 343 aa7.59□□□□□ -1.2
VTI1A-201ENST00000393077 BAATQ14032 418 aaPredicted RBP7.59□□□□□ -1.2
VTI1A-201ENST00000393077 FGL2Q14314 439 aa7.59□□□□□ -1.2
VTI1A-201ENST00000393077 SPATS1Q496A3 300 aa7.59□□□□□ -1.2
VTI1A-201ENST00000393077 NHSL2Q5HYW2 709 aa7.59□□□□□ -1.2
VTI1A-201ENST00000393077 VARS2Q5ST30 1063 aaKnown RBP7.59□□□□□ -1.2
VTI1A-201ENST00000393077 FAM160B1Q5W0V3 765 aa7.59□□□□□ -1.2
VTI1A-201ENST00000393077 ENOSF1Q7L5Y1 443 aa7.59□□□□□ -1.2
VTI1A-201ENST00000393077 AQP12AQ8IXF9 295 aa7.59□□□□□ -1.2
VTI1A-201ENST00000393077 LILRB2Q8N423 598 aa7.59□□□□□ -1.2
VTI1A-201ENST00000393077 EXT2Q93063 718 aa7.59□□□□□ -1.2
VTI1A-201ENST00000393077 TBRG4Q969Z0 631 aaKnown RBP eCLIP7.59□□□□□ -1.29e-7■■■■■ 58.4
VTI1A-201ENST00000393077 PCDHB18PQ96TA0 734 aa7.59□□□□□ -1.2
VTI1A-201ENST00000393077 KIFC1Q9BW19 673 aa7.59□□□□□ -1.2
VTI1A-201ENST00000393077 FGFBP2Q9BYJ0 223 aa7.59□□□□□ -1.2
VTI1A-201ENST00000393077 TRIM8Q9BZR9 551 aa7.59□□□□□ -1.2
VTI1A-201ENST00000393077 NMRAL1Q9HBL8 299 aa7.59□□□□□ -1.2
VTI1A-201ENST00000393077 AKIP1Q9NQ31 210 aa7.59□□□□□ -1.2
VTI1A-201ENST00000393077 NDUFAF4Q9P032 175 aa7.59□□□□□ -1.2
VTI1A-201ENST00000393077 TMPRSS11EQ9UL52 423 aa7.59□□□□□ -1.2
VTI1A-201ENST00000393077 SNX6Q9UNH7 406 aa7.59□□□□□ -1.2
VTI1A-201ENST00000393077 LYVE1Q9Y5Y7 322 aa7.59□□□□□ -1.2
VTI1A-201ENST00000393077 A0A096LPK6 155 aa7.58□□□□□ -1.2
VTI1A-201ENST00000393077 G3V2T6 193 aa7.58□□□□□ -1.2
VTI1A-201ENST00000393077 ATG7O95352 703 aa7.58□□□□□ -1.2
VTI1A-201ENST00000393077 DHFRP00374 187 aa7.58□□□□□ -1.2
VTI1A-201ENST00000393077 CYBBP04839 570 aa7.58□□□□□ -1.2
VTI1A-201ENST00000393077 CYP3A4P08684 503 aa7.58□□□□□ -1.2
VTI1A-201ENST00000393077 INHBBP09529 407 aa7.58□□□□□ -1.2
VTI1A-201ENST00000393077 C7P10643 843 aa7.58□□□□□ -1.2
VTI1A-201ENST00000393077 TFEBP19484 476 aa7.58□□□□□ -1.2
VTI1A-201ENST00000393077 EIF2DP41214 584 aaKnown RBP7.58□□□□□ -1.2
VTI1A-201ENST00000393077 LIG4P49917 911 aa7.58□□□□□ -1.2
VTI1A-201ENST00000393077 PRELPP51888 382 aa7.58□□□□□ -1.2
VTI1A-201ENST00000393077 CDH13P55290 713 aa7.58□□□□□ -1.2
VTI1A-201ENST00000393077 MAZP56270 477 aaKnown RBP7.58□□□□□ -1.2
VTI1A-201ENST00000393077 TAS2R40P59535 323 aa7.58□□□□□ -1.2
VTI1A-201ENST00000393077 FLI1Q01543 452 aaPredicted RBP7.58□□□□□ -1.2
VTI1A-201ENST00000393077 RPL6Q02878 288 aaKnown RBP7.58□□□□□ -1.2
VTI1A-201ENST00000393077 SIX1Q15475 284 aaPredicted RBP7.58□□□□□ -1.2
VTI1A-201ENST00000393077 USF2Q15853 346 aaPredicted RBP7.58□□□□□ -1.2
VTI1A-201ENST00000393077 C6orf141Q5SZD1 244 aa7.58□□□□□ -1.2
VTI1A-201ENST00000393077 HEATR6Q6AI08 1181 aaKnown RBP7.58□□□□□ -1.2
VTI1A-201ENST00000393077 NRARPQ7Z6K4 114 aa7.58□□□□□ -1.2
VTI1A-201ENST00000393077 APOBEC3FQ8IUX4 373 aaKnown RBP7.58□□□□□ -1.2
VTI1A-201ENST00000393077 MFSD2AQ8NA29 543 aa7.58□□□□□ -1.2
VTI1A-201ENST00000393077 CYP2W1Q8TAV3 490 aa7.58□□□□□ -1.2
VTI1A-201ENST00000393077 PHF10Q8WUB8 498 aaKnown RBP7.58□□□□□ -1.2
VTI1A-201ENST00000393077 KAT5Q92993 513 aa7.58□□□□□ -1.2
VTI1A-201ENST00000393077 FOPNLQ96NB1 174 aa7.58□□□□□ -1.2
VTI1A-201ENST00000393077 CPXM1Q96SM3 734 aa7.58□□□□□ -1.2
VTI1A-201ENST00000393077 FAM129BQ96TA1 746 aa7.58□□□□□ -1.2
VTI1A-201ENST00000393077 LXNQ9BS40 222 aa7.58□□□□□ -1.2
VTI1A-201ENST00000393077 CINPQ9BW66 212 aaPredicted RBP7.58□□□□□ -1.2
VTI1A-201ENST00000393077 RSAD1Q9HA92 442 aa7.58□□□□□ -1.2
VTI1A-201ENST00000393077 BIN3Q9NQY0 253 aa7.58□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms