RNA–Protein interactions for RNA: ENST00000391993.7

TRAF3IP1-202, Transcript of TRAF3 interacting protein 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TRAF3IP1, Length 4,003 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP1-202ENST00000391993 IER5Q5VY09 327 aa16.9■□□□□ 0.3
TRAF3IP1-202ENST00000391993 ZNF57Q68EA5 555 aaPredicted RBP16.9■□□□□ 0.3
TRAF3IP1-202ENST00000391993 ZNF544Q6NX49 715 aa16.9■□□□□ 0.3
TRAF3IP1-202ENST00000391993 KDM1BQ8NB78 822 aa16.9■□□□□ 0.3
TRAF3IP1-202ENST00000391993 C19orf18Q8NEA5 215 aa16.9■□□□□ 0.3
TRAF3IP1-202ENST00000391993 TNKS2Q9H2K2 1166 aa16.9■□□□□ 0.3
TRAF3IP1-202ENST00000391993 ACAD9Q9H845 621 aa16.9■□□□□ 0.3
TRAF3IP1-202ENST00000391993 DUS2Q9NX74 493 aaKnown RBP16.9■□□□□ 0.3
TRAF3IP1-202ENST00000391993 ANKMY1Q9P2S6 941 aa16.9■□□□□ 0.3
TRAF3IP1-202ENST00000391993 SNX4O95219 450 aa16.9■□□□□ 0.3
TRAF3IP1-202ENST00000391993 CNPP09543 421 aaKnown RBP16.9■□□□□ 0.3
TRAF3IP1-202ENST00000391993 BMP4P12644 408 aa16.9■□□□□ 0.3
TRAF3IP1-202ENST00000391993 TKTL1P51854 596 aa16.9■□□□□ 0.3
TRAF3IP1-202ENST00000391993 ABATP80404 500 aa16.9■□□□□ 0.3
TRAF3IP1-202ENST00000391993 ZNF267Q14586 743 aaPredicted RBP16.9■□□□□ 0.3
TRAF3IP1-202ENST00000391993 PAN2Q504Q3 1202 aaKnown RBP16.9■□□□□ 0.3
TRAF3IP1-202ENST00000391993 CACHD1Q5VU97 1274 aa16.9■□□□□ 0.3
TRAF3IP1-202ENST00000391993 MAP1SQ66K74 1059 aaPredicted RBP16.9■□□□□ 0.3
TRAF3IP1-202ENST00000391993 GADL1Q6ZQY3 521 aa16.9■□□□□ 0.3
TRAF3IP1-202ENST00000391993 RFPL4BQ6ZWI9 263 aa16.9■□□□□ 0.3
TRAF3IP1-202ENST00000391993 SZRD1Q7Z422 152 aa16.9■□□□□ 0.3
TRAF3IP1-202ENST00000391993 ZC3HC1Q86WB0 502 aaKnown RBP16.9■□□□□ 0.3
TRAF3IP1-202ENST00000391993 ANKFN1Q8N957 763 aa16.9■□□□□ 0.3
TRAF3IP1-202ENST00000391993 LGALS12Q96DT0 336 aa16.9■□□□□ 0.3
TRAF3IP1-202ENST00000391993 TBL1YQ9BQ87 522 aa16.9■□□□□ 0.3
TRAF3IP1-202ENST00000391993 RMND5AQ9H871 391 aa16.9■□□□□ 0.3
TRAF3IP1-202ENST00000391993 PAK1IP1Q9NWT1 392 aaPredicted RBP16.9■□□□□ 0.3
TRAF3IP1-202ENST00000391993 ACTR3BQ9P1U1 418 aa16.9■□□□□ 0.3
TRAF3IP1-202ENST00000391993 SAMHD1Q9Y3Z3 626 aaKnown RBP16.9■□□□□ 0.3
TRAF3IP1-202ENST00000391993 ECM29Q5VYK3 1845 aa16.9■□□□□ 0.3
TRAF3IP1-202ENST00000391993 PLOD3O60568 738 aa16.9■□□□□ 0.3
TRAF3IP1-202ENST00000391993 ANXA9O76027 345 aa16.9■□□□□ 0.3
TRAF3IP1-202ENST00000391993 NTRK1P04629 796 aa16.9■□□□□ 0.3
TRAF3IP1-202ENST00000391993 ALDH7A1P49419 539 aaKnown RBP16.9■□□□□ 0.3
TRAF3IP1-202ENST00000391993 APLP1P51693 650 aa16.9■□□□□ 0.3
TRAF3IP1-202ENST00000391993 USP43Q70EL4 1123 aa16.9■□□□□ 0.3
TRAF3IP1-202ENST00000391993 PIM3Q86V86 326 aa16.9■□□□□ 0.3
TRAF3IP1-202ENST00000391993 ANKRD46Q86W74 232 aa16.9■□□□□ 0.3
TRAF3IP1-202ENST00000391993 CEP97Q8IW35 865 aa16.9■□□□□ 0.3
TRAF3IP1-202ENST00000391993 TEKT5Q96M29 485 aa16.9■□□□□ 0.3
TRAF3IP1-202ENST00000391993 PHOX2BQ99453 314 aa16.9■□□□□ 0.3
TRAF3IP1-202ENST00000391993 TMEM161AQ9NX61 479 aa16.9■□□□□ 0.3
TRAF3IP1-202ENST00000391993 ZNF70Q9UC06 446 aaPredicted RBP16.9■□□□□ 0.3
TRAF3IP1-202ENST00000391993 NUP214P35658 2090 aaPredicted RBP16.89■□□□□ 0.3
TRAF3IP1-202ENST00000391993 MOXD2PA6NHM9 499 aa16.89■□□□□ 0.29
TRAF3IP1-202ENST00000391993 SLC22A1O15245 554 aa16.89■□□□□ 0.29
TRAF3IP1-202ENST00000391993 DCKP27707 260 aa16.89■□□□□ 0.29
TRAF3IP1-202ENST00000391993 TGFBR1P36897 503 aa16.89■□□□□ 0.29
TRAF3IP1-202ENST00000391993 SLC1A2P43004 574 aa16.89■□□□□ 0.29
TRAF3IP1-202ENST00000391993 FSCN1Q16658 493 aaKnown RBP16.89■□□□□ 0.29
TRAF3IP1-202ENST00000391993 GPR153Q6NV75 609 aa16.89■□□□□ 0.29
TRAF3IP1-202ENST00000391993 SLC44A2Q8IWA5 706 aaPredicted RBP16.89■□□□□ 0.29
TRAF3IP1-202ENST00000391993 CDT1Q9H211 546 aa16.89■□□□□ 0.29
TRAF3IP1-202ENST00000391993 LATS2Q9NRM7 1088 aa16.89■□□□□ 0.29
TRAF3IP1-202ENST00000391993 INTS7Q9NVH2 962 aaKnown RBP16.89■□□□□ 0.29
TRAF3IP1-202ENST00000391993 MAT2BQ9NZL9 334 aa16.89■□□□□ 0.29
TRAF3IP1-202ENST00000391993 ZNHIT2Q9UHR6 403 aa16.89■□□□□ 0.29
TRAF3IP1-202ENST00000391993 AAR2Q9Y312 384 aaKnown RBP16.89■□□□□ 0.29
TRAF3IP1-202ENST00000391993 HSPB11Q9Y547 144 aa16.89■□□□□ 0.29
TRAF3IP1-202ENST00000391993 HACD1B0YJ81 288 aa16.89■□□□□ 0.29
TRAF3IP1-202ENST00000391993 MSI1O43347 362 aaKnown RBP16.89■□□□□ 0.29
TRAF3IP1-202ENST00000391993 BMP2P12643 396 aa16.89■□□□□ 0.29
TRAF3IP1-202ENST00000391993 POLR2EP19388 210 aaKnown RBP16.89■□□□□ 0.29
TRAF3IP1-202ENST00000391993 AKAP5P24588 427 aa16.89■□□□□ 0.29
TRAF3IP1-202ENST00000391993 HTR1BP28222 390 aa16.89■□□□□ 0.29
TRAF3IP1-202ENST00000391993 CD47Q08722 323 aa16.89■□□□□ 0.29
TRAF3IP1-202ENST00000391993 PCID2Q5JVF3 399 aa16.89■□□□□ 0.29
TRAF3IP1-202ENST00000391993 NOL9Q5SY16 702 aaKnown RBP16.89■□□□□ 0.29
TRAF3IP1-202ENST00000391993 STRIP1Q5VSL9 837 aa16.89■□□□□ 0.29
TRAF3IP1-202ENST00000391993 NCBP2-AS2Q69YL0 99 aa16.89■□□□□ 0.29
TRAF3IP1-202ENST00000391993 ZSCAN5AQ9BUG6 496 aa16.89■□□□□ 0.29
TRAF3IP1-202ENST00000391993 DPY30Q9C005 99 aa16.89■□□□□ 0.29
TRAF3IP1-202ENST00000391993 HAPLN2Q9GZV7 340 aa16.89■□□□□ 0.29
TRAF3IP1-202ENST00000391993 NANOGQ9H9S0 305 aa16.89■□□□□ 0.29
TRAF3IP1-202ENST00000391993 OLA1Q9NTK5 396 aaKnown RBP16.89■□□□□ 0.29
TRAF3IP1-202ENST00000391993 PCDHGA8Q9Y5G5 932 aa16.89■□□□□ 0.29
TRAF3IP1-202ENST00000391993 IL18RAPO95256 599 aa16.89■□□□□ 0.29
TRAF3IP1-202ENST00000391993 UFM1P61960 85 aa16.89■□□□□ 0.29
TRAF3IP1-202ENST00000391993 ZNF404Q494X3 552 aa16.89■□□□□ 0.29
TRAF3IP1-202ENST00000391993 CTU1Q7Z7A3 348 aaKnown RBP16.89■□□□□ 0.29
TRAF3IP1-202ENST00000391993 SPARTQ8N0X7 666 aa16.89■□□□□ 0.29
TRAF3IP1-202ENST00000391993 PACRGLQ8N7B6 248 aa16.89■□□□□ 0.29
TRAF3IP1-202ENST00000391993 MAELQ96JY0 434 aaKnown RBP16.89■□□□□ 0.29
TRAF3IP1-202ENST00000391993 CDK15Q96Q40 435 aa16.89■□□□□ 0.29
TRAF3IP1-202ENST00000391993 MKS1Q9NXB0 559 aa16.89■□□□□ 0.29
TRAF3IP1-202ENST00000391993 DUSP12Q9UNI6 340 aa16.89■□□□□ 0.29
TRAF3IP1-202ENST00000391993 VWA7Q9Y334 891 aa16.89■□□□□ 0.29
TRAF3IP1-202ENST00000391993 PPP6CO00743 305 aa16.88■□□□□ 0.29
TRAF3IP1-202ENST00000391993 EPN2O95208 641 aa16.88■□□□□ 0.29
TRAF3IP1-202ENST00000391993 LRATO95237 230 aa16.88■□□□□ 0.29
TRAF3IP1-202ENST00000391993 RASAL1O95294 804 aa16.88■□□□□ 0.29
TRAF3IP1-202ENST00000391993 AP2A1O95782 977 aa16.88■□□□□ 0.29
TRAF3IP1-202ENST00000391993 EFNA1P20827 205 aaPredicted RBP16.88■□□□□ 0.29
TRAF3IP1-202ENST00000391993 RFC2P35250 354 aa16.88■□□□□ 0.29
TRAF3IP1-202ENST00000391993 PITX1P78337 314 aaPredicted RBP16.88■□□□□ 0.29
TRAF3IP1-202ENST00000391993 SELENBP1Q13228 472 aa16.88■□□□□ 0.29
TRAF3IP1-202ENST00000391993 MAPKAPK3Q16644 382 aa16.88■□□□□ 0.29
TRAF3IP1-202ENST00000391993 SOWAHAQ2M3V2 549 aa16.88■□□□□ 0.29
TRAF3IP1-202ENST00000391993 CCSAPQ6IQ19 270 aaPredicted RBP16.88■□□□□ 0.29
TRAF3IP1-202ENST00000391993 SLC26A9Q7LBE3 791 aa16.88■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms