RNA–Protein interactions for RNA: ENST00000389589.8

SHOX2-201, Transcript of short stature homeobox 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SHOX2, Length 2,072 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2-201ENST00000389589 CPA2P48052 419 aa25■■□□□ 1.59
SHOX2-201ENST00000389589 VASPP50552 380 aaPredicted RBP25■■□□□ 1.59
SHOX2-201ENST00000389589 NAA20P61599 178 aa25■■□□□ 1.59
SHOX2-201ENST00000389589 SATB1Q01826 763 aa25■■□□□ 1.59
SHOX2-201ENST00000389589 LSM12Q3MHD2 195 aaKnown RBP25■■□□□ 1.59
SHOX2-201ENST00000389589 GDPD4Q6W3E5 623 aa25■■□□□ 1.59
SHOX2-201ENST00000389589 NAT16Q8N8M0 369 aa25■■□□□ 1.59
SHOX2-201ENST00000389589 FAM13CQ8NE31 585 aa25■■□□□ 1.59
SHOX2-201ENST00000389589 OSCP1Q8WVF1 389 aa25■■□□□ 1.59
SHOX2-201ENST00000389589 ASIC4Q96FT7 647 aa25■■□□□ 1.59
SHOX2-201ENST00000389589 GNPTGQ9UJJ9 305 aa25■■□□□ 1.59
SHOX2-201ENST00000389589 GOLGA8QA0A0J9YX86 632 aa25■■□□□ 1.59
SHOX2-201ENST00000389589 GOLGA8OA6NCC3 632 aa25■■□□□ 1.59
SHOX2-201ENST00000389589 GOLGA8NF8WBI6 632 aa25■■□□□ 1.59
SHOX2-201ENST00000389589 NEMP1O14524 444 aa25■■□□□ 1.59
SHOX2-201ENST00000389589 SLC22A2O15244 555 aa25■■□□□ 1.59
SHOX2-201ENST00000389589 UGT2B4P06133 528 aa25■■□□□ 1.59
SHOX2-201ENST00000389589 GFAPP14136 432 aa25■■□□□ 1.59
SHOX2-201ENST00000389589 EPHA3P29320 983 aa25■■□□□ 1.59
SHOX2-201ENST00000389589 PDCD2Q16342 344 aaPredicted RBP25■■□□□ 1.59
SHOX2-201ENST00000389589 DNAL1Q4LDG9 190 aa25■■□□□ 1.59
SHOX2-201ENST00000389589 ZDHHC20Q5W0Z9 365 aa25■■□□□ 1.59
SHOX2-201ENST00000389589 TMEM215Q68D42 235 aa25■■□□□ 1.59
SHOX2-201ENST00000389589 TSPAN33Q86UF1 283 aa25■■□□□ 1.59
SHOX2-201ENST00000389589 OR2A12Q8NGT7 310 aa25■■□□□ 1.59
SHOX2-201ENST00000389589 SLC30A3Q99726 388 aa25■■□□□ 1.59
SHOX2-201ENST00000389589 DHRS7Q9Y394 339 aa25■■□□□ 1.59
SHOX2-201ENST00000389589 A8MUI8 341 aa24.99■■□□□ 1.59
SHOX2-201ENST00000389589 GPR39O43194 453 aa24.99■■□□□ 1.59
SHOX2-201ENST00000389589 DCXO43602 365 aa24.99■■□□□ 1.59
SHOX2-201ENST00000389589 TSPAN12O95859 305 aa24.99■■□□□ 1.59
SHOX2-201ENST00000389589 ADH1CP00326 375 aa24.99■■□□□ 1.59
SHOX2-201ENST00000389589 BMP1P13497 986 aa24.99■■□□□ 1.59
SHOX2-201ENST00000389589 ACRV1P26436 265 aa24.99■■□□□ 1.59
SHOX2-201ENST00000389589 CLCN7P51798 805 aa24.99■■□□□ 1.59
SHOX2-201ENST00000389589 DUSP6Q16828 381 aa24.99■■□□□ 1.59
SHOX2-201ENST00000389589 PTRHD1Q6GMV3 140 aaKnown RBP24.99■■□□□ 1.59
SHOX2-201ENST00000389589 WFIKKN2Q8TEU8 576 aa24.99■■□□□ 1.59
SHOX2-201ENST00000389589 MAELQ96JY0 434 aaKnown RBP24.99■■□□□ 1.59
SHOX2-201ENST00000389589 SFXN1Q9H9B4 322 aa24.99■■□□□ 1.59
SHOX2-201ENST00000389589 CRLS1Q9UJA2 301 aa24.99■■□□□ 1.59
SHOX2-201ENST00000389589 SUPT3HB4E1H0 165 aa24.98■■□□□ 1.59
SHOX2-201ENST00000389589 SUPT3HO75486 399 aa24.98■■□□□ 1.59
SHOX2-201ENST00000389589 CYP17A1P05093 508 aa24.98■■□□□ 1.59
SHOX2-201ENST00000389589 ADH5P11766 374 aa24.98■■□□□ 1.59
SHOX2-201ENST00000389589 ADSLP30566 484 aaPredicted RBP24.98■■□□□ 1.59
SHOX2-201ENST00000389589 TSNQ15631 228 aaKnown RBP24.98■■□□□ 1.59
SHOX2-201ENST00000389589 PFKFB4Q16877 469 aa24.98■■□□□ 1.59
SHOX2-201ENST00000389589 GEN1Q17RS7 908 aa24.98■■□□□ 1.59
SHOX2-201ENST00000389589 WASHC2DQ5SRD0 308 aa24.98■■□□□ 1.59
SHOX2-201ENST00000389589 LRRC66Q68CR7 880 aa24.98■■□□□ 1.59
SHOX2-201ENST00000389589 BRAT1Q6PJG6 821 aa24.98■■□□□ 1.59
SHOX2-201ENST00000389589 FBXO39Q8N4B4 442 aa24.98■■□□□ 1.59
SHOX2-201ENST00000389589 C12orf76Q8N812 135 aaPredicted RBP24.98■■□□□ 1.59
SHOX2-201ENST00000389589 CHST14Q8NCH0 376 aa24.98■■□□□ 1.59
SHOX2-201ENST00000389589 RBM15BQ8NDT2 890 aaKnown RBP24.98■■□□□ 1.59
SHOX2-201ENST00000389589 GIMAP7Q8NHV1 300 aa24.98■■□□□ 1.59
SHOX2-201ENST00000389589 MAGEC3Q8TD91 643 aa24.98■■□□□ 1.59
SHOX2-201ENST00000389589 LINGO1Q96FE5 620 aa24.98■■□□□ 1.59
SHOX2-201ENST00000389589 PDLIM5Q96HC4 596 aaKnown RBP24.98■■□□□ 1.59
SHOX2-201ENST00000389589 HEPHQ9BQS7 1158 aa24.98■■□□□ 1.59
SHOX2-201ENST00000389589 LMAN2LQ9H0V9 348 aa24.98■■□□□ 1.59
SHOX2-201ENST00000389589 BRD9Q9H8M2 597 aa24.98■■□□□ 1.59
SHOX2-201ENST00000389589 CHD7Q9P2D1 2997 aa24.98■■□□□ 1.59
SHOX2-201ENST00000389589 BTN3A1O00481 513 aa24.98■■□□□ 1.59
SHOX2-201ENST00000389589 HOXC11O43248 304 aaPredicted RBP24.98■■□□□ 1.59
SHOX2-201ENST00000389589 ASLP04424 464 aa24.98■■□□□ 1.59
SHOX2-201ENST00000389589 COPAP53621 1224 aa24.98■■□□□ 1.59
SHOX2-201ENST00000389589 CHRNA6Q15825 494 aa24.98■■□□□ 1.59
SHOX2-201ENST00000389589 TMC5Q6UXY8 1006 aa24.98■■□□□ 1.59
SHOX2-201ENST00000389589 CPSF7Q8N684 471 aaKnown RBP24.98■■□□□ 1.59
SHOX2-201ENST00000389589 EEF1AKMT1Q8WVE0 214 aa24.98■■□□□ 1.59
SHOX2-201ENST00000389589 FUBP1Q96AE4 644 aaKnown RBP24.98■■□□□ 1.59
SHOX2-201ENST00000389589 MRGPRX3Q96LB0 322 aa24.98■■□□□ 1.59
SHOX2-201ENST00000389589 LRRC3BQ96PB8 259 aa24.98■■□□□ 1.59
SHOX2-201ENST00000389589 PLXNB3Q9ULL4 1909 aa24.98■■□□□ 1.59
SHOX2-201ENST00000389589 A8MX80 341 aa24.97■■□□□ 1.59
SHOX2-201ENST00000389589 TMEM233B4DJY2 109 aa24.97■■□□□ 1.59
SHOX2-201ENST00000389589 CDC7O00311 574 aa24.97■■□□□ 1.59
SHOX2-201ENST00000389589 ECI2O75521 394 aa24.97■■□□□ 1.59
SHOX2-201ENST00000389589 SRPRAP08240 638 aaKnown RBP24.97■■□□□ 1.59
SHOX2-201ENST00000389589 CHRM1P11229 460 aaPredicted RBP24.97■■□□□ 1.59
SHOX2-201ENST00000389589 DGKGP49619 791 aa24.97■■□□□ 1.59
SHOX2-201ENST00000389589 MXRA7P84157 204 aa24.97■■□□□ 1.59
SHOX2-201ENST00000389589 KLF10Q13118 480 aa24.97■■□□□ 1.59
SHOX2-201ENST00000389589 NAA25Q14CX7 972 aa24.97■■□□□ 1.59
SHOX2-201ENST00000389589 EML3Q32P44 896 aa24.97■■□□□ 1.59
SHOX2-201ENST00000389589 FRS2Q8WU20 508 aa24.97■■□□□ 1.59
SHOX2-201ENST00000389589 PPP1R36Q96LQ0 422 aa24.97■■□□□ 1.59
SHOX2-201ENST00000389589 KLHL32Q96NJ5 620 aa24.97■■□□□ 1.59
SHOX2-201ENST00000389589 MRGBPQ9NV56 204 aa24.97■■□□□ 1.59
SHOX2-201ENST00000389589 TRAF6Q9Y4K3 522 aa24.97■■□□□ 1.59
SHOX2-201ENST00000389589 PIKFYVEQ9Y2I7 2098 aa24.97■■□□□ 1.59
SHOX2-201ENST00000389589 NPEPPSL1A6NEC2 478 aa24.97■■□□□ 1.59
SHOX2-201ENST00000389589 AGAP14A8MT82 685 aa24.97■■□□□ 1.59
SHOX2-201ENST00000389589 MAGEC1O60732 1142 aa24.97■■□□□ 1.59
SHOX2-201ENST00000389589 CISD3P0C7P0 127 aa24.97■■□□□ 1.59
SHOX2-201ENST00000389589 NRIP1P48552 1158 aa24.97■■□□□ 1.59
SHOX2-201ENST00000389589 SHHQ15465 462 aa24.97■■□□□ 1.59
SHOX2-201ENST00000389589 NXNQ6DKJ4 435 aa24.97■■□□□ 1.59
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms