RNA–Protein interactions for RNA: ENST00000380805.6

GMDS-201, Transcript of GDP-mannose 4,6-dehydratase, humanhuman

TSL 2

Gene GMDS, Length 1,743 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GMDS-201ENST00000380805 FAM161BQ96MY7 647 aa19.1■□□□□ 0.65
GMDS-201ENST00000380805 SLC30A3Q99726 388 aa19.1■□□□□ 0.65
GMDS-201ENST00000380805 THTPAQ9BU02 230 aa19.1■□□□□ 0.65
GMDS-201ENST00000380805 TBC1D14Q9P2M4 693 aa19.1■□□□□ 0.65
GMDS-201ENST00000380805 GALPQ9UBC7 116 aa19.1■□□□□ 0.65
GMDS-201ENST00000380805 IKZF3Q9UKT9 509 aa19.1■□□□□ 0.65
GMDS-201ENST00000380805 TRAF6Q9Y4K3 522 aa19.1■□□□□ 0.65
GMDS-201ENST00000380805 PLXNB3Q9ULL4 1909 aa19.09■□□□□ 0.65
GMDS-201ENST00000380805 C1orf232A0A0U1RR37 186 aa19.09■□□□□ 0.65
GMDS-201ENST00000380805 CCNT2O60583 730 aaKnown RBP19.09■□□□□ 0.65
GMDS-201ENST00000380805 RPS17P08708 135 aaKnown RBP19.09■□□□□ 0.65
GMDS-201ENST00000380805 EZRP15311 586 aaKnown RBP19.09■□□□□ 0.65
GMDS-201ENST00000380805 ITGAXP20702 1163 aa19.09■□□□□ 0.65
GMDS-201ENST00000380805 PBX2P40425 430 aa19.09■□□□□ 0.65
GMDS-201ENST00000380805 SLC25A3Q00325 362 aa19.09■□□□□ 0.65
GMDS-201ENST00000380805 MYLK3Q32MK0 819 aa19.09■□□□□ 0.65
GMDS-201ENST00000380805 UGT3A2Q3SY77 523 aa19.09■□□□□ 0.65
GMDS-201ENST00000380805 LYPLAL1Q5VWZ2 237 aa19.09■□□□□ 0.65
GMDS-201ENST00000380805 CYHR1Q6ZMK1 362 aa19.09■□□□□ 0.65
GMDS-201ENST00000380805 IRF7Q92985 503 aa19.09■□□□□ 0.65
GMDS-201ENST00000380805 MCCC1Q96RQ3 725 aaPredicted RBP19.09■□□□□ 0.65
GMDS-201ENST00000380805 TNKS2Q9H2K2 1166 aa19.09■□□□□ 0.65
GMDS-201ENST00000380805 CDH23Q9H251 3354 aa19.09■□□□□ 0.65
GMDS-201ENST00000380805 A0A0U1RQS6 177 aa19.08■□□□□ 0.65
GMDS-201ENST00000380805 A0A1W2PQ67 120 aa19.08■□□□□ 0.65
GMDS-201ENST00000380805 GOLGA8CPA6NN73 597 aa19.08■□□□□ 0.65
GMDS-201ENST00000380805 ECI2O75521 394 aa19.08■□□□□ 0.65
GMDS-201ENST00000380805 ARHGEF15O94989 841 aa19.08■□□□□ 0.65
GMDS-201ENST00000380805 PRAMEF1O95521 474 aa19.08■□□□□ 0.65
GMDS-201ENST00000380805 RB1P06400 928 aa19.08■□□□□ 0.65
GMDS-201ENST00000380805 GKP32189 559 aa19.08■□□□□ 0.65
GMDS-201ENST00000380805 GCKP35557 465 aa19.08■□□□□ 0.65
GMDS-201ENST00000380805 STK19P49842 368 aaPredicted RBP19.08■□□□□ 0.65
GMDS-201ENST00000380805 IL2P60568 153 aa19.08■□□□□ 0.65
GMDS-201ENST00000380805 ACTR3P61158 418 aa19.08■□□□□ 0.65
GMDS-201ENST00000380805 NFATC2Q13469 925 aa19.08■□□□□ 0.65
GMDS-201ENST00000380805 E2F5Q15329 346 aa19.08■□□□□ 0.65
GMDS-201ENST00000380805 TSNQ15631 228 aaKnown RBP19.08■□□□□ 0.65
GMDS-201ENST00000380805 GPR33Q49SQ1 333 aa19.08■□□□□ 0.65
GMDS-201ENST00000380805 TXNDC11Q6PKC3 985 aa19.08■□□□□ 0.65
GMDS-201ENST00000380805 RPS27LQ71UM5 84 aaKnown RBP19.08■□□□□ 0.65
GMDS-201ENST00000380805 CLYBLQ8N0X4 340 aa19.08■□□□□ 0.65
GMDS-201ENST00000380805 RYBPQ8N488 228 aaPredicted RBP19.08■□□□□ 0.65
GMDS-201ENST00000380805 KIAA1958Q8N8K9 716 aa19.08■□□□□ 0.65
GMDS-201ENST00000380805 SCRN2Q96FV2 425 aa19.08■□□□□ 0.65
GMDS-201ENST00000380805 ZNF641Q96N77 438 aaPredicted RBP19.08■□□□□ 0.65
GMDS-201ENST00000380805 C17orf80Q9BSJ5 609 aa19.08■□□□□ 0.65
GMDS-201ENST00000380805 IL26Q9NPH9 171 aa19.08■□□□□ 0.65
GMDS-201ENST00000380805 SPHK2Q9NRA0 654 aa19.08■□□□□ 0.65
GMDS-201ENST00000380805 SLC25A13Q9UJS0 675 aa19.08■□□□□ 0.65
GMDS-201ENST00000380805 RNF112Q9ULX5 631 aa19.08■□□□□ 0.65
GMDS-201ENST00000380805 DHRS7Q9Y394 339 aa19.08■□□□□ 0.65
GMDS-201ENST00000380805 COPG1Q9Y678 874 aaKnown RBP19.08■□□□□ 0.65
GMDS-201ENST00000380805 HSFX4A0A1B0GTS1 333 aaPredicted RBP19.08■□□□□ 0.64
GMDS-201ENST00000380805 HSFX3A0A1B0GWH4 333 aaPredicted RBP19.08■□□□□ 0.64
GMDS-201ENST00000380805 WASH3PC4AMC7 463 aa19.08■□□□□ 0.64
GMDS-201ENST00000380805 CLASP2O75122 1294 aaKnown RBP19.08■□□□□ 0.64
GMDS-201ENST00000380805 XYLBO75191 536 aa19.08■□□□□ 0.64
GMDS-201ENST00000380805 CDK14O94921 469 aa19.08■□□□□ 0.64
GMDS-201ENST00000380805 PABPC1P11940 636 aaKnown RBP19.08■□□□□ 0.64
GMDS-201ENST00000380805 ZNF7P17097 686 aaPredicted RBP19.08■□□□□ 0.64
GMDS-201ENST00000380805 ITGALP20701 1170 aa19.08■□□□□ 0.64
GMDS-201ENST00000380805 PFKFB4Q16877 469 aa19.08■□□□□ 0.64
GMDS-201ENST00000380805 TMEM198Q66K66 360 aa19.08■□□□□ 0.64
GMDS-201ENST00000380805 GRAMD4Q6IC98 578 aa19.08■□□□□ 0.64
GMDS-201ENST00000380805 ELMSAN1Q6PJG2 1045 aa19.08■□□□□ 0.64
GMDS-201ENST00000380805 TPRG1Q6ZUI0 275 aa19.08■□□□□ 0.64
GMDS-201ENST00000380805 TAS2R42Q7RTR8 314 aa19.08■□□□□ 0.64
GMDS-201ENST00000380805 SPRED2Q7Z698 418 aa19.08■□□□□ 0.64
GMDS-201ENST00000380805 RBFAQ8N0V3 343 aa19.08■□□□□ 0.64
GMDS-201ENST00000380805 FBXO39Q8N4B4 442 aa19.08■□□□□ 0.64
GMDS-201ENST00000380805 SIDT2Q8NBJ9 832 aaKnown RBP19.08■□□□□ 0.64
GMDS-201ENST00000380805 FAM136AQ96C01 138 aa19.08■□□□□ 0.64
GMDS-201ENST00000380805 RPL10LQ96L21 214 aaKnown RBP19.08■□□□□ 0.64
GMDS-201ENST00000380805 PPP1R36Q96LQ0 422 aa19.08■□□□□ 0.64
GMDS-201ENST00000380805 ANKRD27Q96NW4 1050 aa19.08■□□□□ 0.64
GMDS-201ENST00000380805 ZDHHC7Q9NXF8 308 aa19.08■□□□□ 0.64
GMDS-201ENST00000380805 YBX2Q9Y2T7 364 aaKnown RBP19.08■□□□□ 0.64
GMDS-201ENST00000380805 CDC7O00311 574 aa19.07■□□□□ 0.64
GMDS-201ENST00000380805 CIB2O75838 187 aa19.07■□□□□ 0.64
GMDS-201ENST00000380805 SIX3O95343 332 aaPredicted RBP19.07■□□□□ 0.64
GMDS-201ENST00000380805 ANP32DO95626 131 aa19.07■□□□□ 0.64
GMDS-201ENST00000380805 BMP1P13497 986 aa19.07■□□□□ 0.64
GMDS-201ENST00000380805 GFAPP14136 432 aa19.07■□□□□ 0.64
GMDS-201ENST00000380805 EPCAMP16422 314 aa19.07■□□□□ 0.64
GMDS-201ENST00000380805 BPIP17213 487 aa19.07■□□□□ 0.64
GMDS-201ENST00000380805 IRS1P35568 1242 aa19.07■□□□□ 0.64
GMDS-201ENST00000380805 SH3BP2P78314 561 aa19.07■□□□□ 0.64
GMDS-201ENST00000380805 KANK2Q63ZY3 851 aa19.07■□□□□ 0.64
GMDS-201ENST00000380805 SERPINA9Q86WD7 417 aa19.07■□□□□ 0.64
GMDS-201ENST00000380805 CATSPER2Q96P56 530 aa19.07■□□□□ 0.64
GMDS-201ENST00000380805 PANX3Q96QZ0 392 aa19.07■□□□□ 0.64
GMDS-201ENST00000380805 TTC1Q99614 292 aa19.07■□□□□ 0.64
GMDS-201ENST00000380805 BBS2Q9BXC9 721 aa19.07■□□□□ 0.64
GMDS-201ENST00000380805 PBX4Q9BYU1 374 aa19.07■□□□□ 0.64
GMDS-201ENST00000380805 SLC2A11Q9BYW1 496 aa19.07■□□□□ 0.64
GMDS-201ENST00000380805 SUV39H2Q9H5I1 410 aa19.07■□□□□ 0.64
GMDS-201ENST00000380805 HECAQ9UBI9 543 aaPredicted RBP19.07■□□□□ 0.64
GMDS-201ENST00000380805 LOC100653049A0A140TA62 436 aa19.06■□□□□ 0.64
GMDS-201ENST00000380805 NEDD8-MDP1E9PL57 170 aa19.06■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms