RNA–Protein interactions for RNA: ENST00000380707.8

SMN1-202, Transcript of survival of motor neuron 1, telomeric, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SMN1, Length 1,536 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN1-202ENST00000380707 NFATC4Q14934 902 aa12.56□□□□□ -0.4
SMN1-202ENST00000380707 ERCC6LQ2NKX8 1250 aa12.56□□□□□ -0.4
SMN1-202ENST00000380707 KIF19Q2TAC6 998 aa12.56□□□□□ -0.4
SMN1-202ENST00000380707 ZRANB3Q5FWF4 1079 aa12.56□□□□□ -0.4
SMN1-202ENST00000380707 ZNF648Q5T619 568 aaPredicted RBP12.56□□□□□ -0.4
SMN1-202ENST00000380707 KCTD16Q68DU8 428 aa12.56□□□□□ -0.4
SMN1-202ENST00000380707 KIAA0930Q6ICG6 404 aaPredicted RBP12.56□□□□□ -0.4
SMN1-202ENST00000380707 TCEAL6Q6IPX3 200 aa12.56□□□□□ -0.4
SMN1-202ENST00000380707 PSAPL1Q6NUJ1 521 aa12.56□□□□□ -0.4
SMN1-202ENST00000380707 UNC5AQ6ZN44 842 aa12.56□□□□□ -0.4
SMN1-202ENST00000380707 SNX20Q7Z614 316 aa12.56□□□□□ -0.4
SMN1-202ENST00000380707 UNC5BQ8IZJ1 945 aa12.56□□□□□ -0.4
SMN1-202ENST00000380707 OR4L1Q8NH43 312 aa12.56□□□□□ -0.4
SMN1-202ENST00000380707 TCEAL3Q969E4 200 aa12.56□□□□□ -0.4
SMN1-202ENST00000380707 SKA1Q96BD8 255 aa12.56□□□□□ -0.4
SMN1-202ENST00000380707 CFAP36Q96G28 342 aa12.56□□□□□ -0.4
SMN1-202ENST00000380707 VPS35Q96QK1 796 aa12.56□□□□□ -0.4
SMN1-202ENST00000380707 FMO2Q99518 471 aa12.56□□□□□ -0.4
SMN1-202ENST00000380707 PHACTR1Q9C0D0 580 aa12.56□□□□□ -0.4
SMN1-202ENST00000380707 CAAP1Q9H8G2 361 aa12.56□□□□□ -0.4
SMN1-202ENST00000380707 PHPT1Q9NRX4 125 aaPredicted RBP12.56□□□□□ -0.4
SMN1-202ENST00000380707 SMOXQ9NWM0 555 aa12.56□□□□□ -0.4
SMN1-202ENST00000380707 SLC6A14Q9UN76 642 aa12.56□□□□□ -0.4
SMN1-202ENST00000380707 TMEM98Q9Y2Y6 226 aa12.56□□□□□ -0.4
SMN1-202ENST00000380707 SNX11Q9Y5W9 270 aa12.56□□□□□ -0.4
SMN1-202ENST00000380707 SLC30A1Q9Y6M5 507 aa12.56□□□□□ -0.4
SMN1-202ENST00000380707 FAM169AQ9Y6X4 670 aa12.56□□□□□ -0.4
SMN1-202ENST00000380707 RIF1Q5UIP0 2472 aaKnown RBP12.55□□□□□ -0.4
SMN1-202ENST00000380707 TRBV5-4A0A0C4DH59 114 aa12.55□□□□□ -0.4
SMN1-202ENST00000380707 MTX2O75431 263 aa12.55□□□□□ -0.4
SMN1-202ENST00000380707 TTC4O95801 387 aa12.55□□□□□ -0.4
SMN1-202ENST00000380707 FUCA1P04066 466 aa12.55□□□□□ -0.4
SMN1-202ENST00000380707 MYBL2P10244 700 aa12.55□□□□□ -0.4
SMN1-202ENST00000380707 ITGALP20701 1170 aa12.55□□□□□ -0.4
SMN1-202ENST00000380707 HTR1BP28222 390 aa12.55□□□□□ -0.4
SMN1-202ENST00000380707 CTSKP43235 329 aa12.55□□□□□ -0.4
SMN1-202ENST00000380707 MAGEA4P43358 317 aa12.55□□□□□ -0.4
SMN1-202ENST00000380707 POLD2P49005 469 aa12.55□□□□□ -0.4
SMN1-202ENST00000380707 SPEM2Q0P670 501 aa12.55□□□□□ -0.4
SMN1-202ENST00000380707 GRIK2Q13002 908 aa12.55□□□□□ -0.4
SMN1-202ENST00000380707 GPR33Q49SQ1 333 aa12.55□□□□□ -0.4
SMN1-202ENST00000380707 KHDC1Q4VXA5 237 aaKnown RBP12.55□□□□□ -0.4
SMN1-202ENST00000380707 PRAMEF14Q5SWL7 426 aa12.55□□□□□ -0.4
SMN1-202ENST00000380707 STEAP4Q687X5 459 aa12.55□□□□□ -0.4
SMN1-202ENST00000380707 AFTPHQ6ULP2 937 aa12.55□□□□□ -0.4
SMN1-202ENST00000380707 MACC1Q6ZN28 852 aa12.55□□□□□ -0.4
SMN1-202ENST00000380707 TAS2R42Q7RTR8 314 aa12.55□□□□□ -0.4
SMN1-202ENST00000380707 DCP2Q8IU60 420 aaKnown RBP12.55□□□□□ -0.4
SMN1-202ENST00000380707 PHYKPLQ8IUZ5 450 aa12.55□□□□□ -0.4
SMN1-202ENST00000380707 CCNJLQ8IV13 435 aa12.55□□□□□ -0.4
SMN1-202ENST00000380707 DCLK2Q8N568 766 aa12.55□□□□□ -0.4
SMN1-202ENST00000380707 PYROXD1Q8WU10 500 aa12.55□□□□□ -0.4
SMN1-202ENST00000380707 UBXN4Q92575 508 aa12.55□□□□□ -0.4
SMN1-202ENST00000380707 CCDC97Q96F63 343 aaPredicted RBP12.55□□□□□ -0.4
SMN1-202ENST00000380707 SGSM3Q96HU1 749 aa12.55□□□□□ -0.4
SMN1-202ENST00000380707 MARCH4Q9P2E8 410 aaPredicted RBP12.55□□□□□ -0.4
SMN1-202ENST00000380707 NCDNQ9UBB6 729 aa12.55□□□□□ -0.4
SMN1-202ENST00000380707 MTRF1LQ9UGC7 380 aaKnown RBP12.55□□□□□ -0.4
SMN1-202ENST00000380707 KHNYNO15037 678 aaKnown RBP12.54□□□□□ -0.4
SMN1-202ENST00000380707 CD3EAPO15446 510 aaKnown RBP12.54□□□□□ -0.4
SMN1-202ENST00000380707 MAGEC1O60732 1142 aa12.54□□□□□ -0.4
SMN1-202ENST00000380707 CEACAM5P06731 702 aa12.54□□□□□ -0.4
SMN1-202ENST00000380707 ZNF806P0C7X5 589 aa12.54□□□□□ -0.4
SMN1-202ENST00000380707 PAMP19021 973 aa12.54□□□□□ -0.4
SMN1-202ENST00000380707 ACRV1P26436 265 aa12.54□□□□□ -0.4
SMN1-202ENST00000380707 EIF2B5Q13144 721 aaKnown RBP12.54□□□□□ -0.4
SMN1-202ENST00000380707 PTK2BQ14289 1009 aa12.54□□□□□ -0.4
SMN1-202ENST00000380707 SEMA3AQ14563 771 aa12.54□□□□□ -0.4
SMN1-202ENST00000380707 NAA30Q147X3 362 aaPredicted RBP12.54□□□□□ -0.4
SMN1-202ENST00000380707 LONRF1Q17RB8 773 aa12.54□□□□□ -0.4
SMN1-202ENST00000380707 ZNF542PQ5EBM4 170 aa12.54□□□□□ -0.4
SMN1-202ENST00000380707 SPANXN3Q5MJ09 141 aa12.54□□□□□ -0.4
SMN1-202ENST00000380707 GPRC6AQ5T6X5 926 aa12.54□□□□□ -0.4
SMN1-202ENST00000380707 DOK6Q6PKX4 331 aa12.54□□□□□ -0.4
SMN1-202ENST00000380707 ENPP7Q6UWV6 458 aa12.54□□□□□ -0.4
SMN1-202ENST00000380707 ASCL5Q7RTU5 278 aa12.54□□□□□ -0.4
SMN1-202ENST00000380707 LDB1Q86U70 411 aaPredicted RBP12.54□□□□□ -0.4
SMN1-202ENST00000380707 SERPINA9Q86WD7 417 aa12.54□□□□□ -0.4
SMN1-202ENST00000380707 GSPT2Q8IYD1 628 aaKnown RBP12.54□□□□□ -0.4
SMN1-202ENST00000380707 NXPE1Q8N323 547 aa12.54□□□□□ -0.4
SMN1-202ENST00000380707 SERBP1Q8NC51 408 aaKnown RBP eCLIP12.54□□□□□ -0.4
SMN1-202ENST00000380707 DDHD1Q8NEL9 900 aa12.54□□□□□ -0.4
SMN1-202ENST00000380707 OR56A4Q8NGH8 313 aa12.54□□□□□ -0.4
SMN1-202ENST00000380707 GDAP1Q8TB36 358 aa12.54□□□□□ -0.4
SMN1-202ENST00000380707 C9orf72Q96LT7 481 aa12.54□□□□□ -0.4
SMN1-202ENST00000380707 WDR92Q96MX6 357 aa12.54□□□□□ -0.4
SMN1-202ENST00000380707 OR2AG1Q9H205 316 aa12.54□□□□□ -0.4
SMN1-202ENST00000380707 FGF22Q9HCT0 170 aa12.54□□□□□ -0.4
SMN1-202ENST00000380707 MRPL40Q9NQ50 206 aaKnown RBP12.54□□□□□ -0.4
SMN1-202ENST00000380707 CATSPERZQ9NTU4 200 aa12.54□□□□□ -0.4
SMN1-202ENST00000380707 C20orf96Q9NUD7 363 aaPredicted RBP12.54□□□□□ -0.4
SMN1-202ENST00000380707 KLF15Q9UIH9 416 aa12.54□□□□□ -0.4
SMN1-202ENST00000380707 CRLS1Q9UJA2 301 aa12.54□□□□□ -0.4
SMN1-202ENST00000380707 SLC17A4Q9Y2C5 497 aa12.54□□□□□ -0.4
SMN1-202ENST00000380707 ARHGAP33O14559 1287 aa12.53□□□□□ -0.4
SMN1-202ENST00000380707 FAM153BP0C7A2 387 aa12.53□□□□□ -0.4
SMN1-202ENST00000380707 ERVK-10P10266 1014 aa12.53□□□□□ -0.4
SMN1-202ENST00000380707 TGM1P22735 817 aa12.53□□□□□ -0.4
SMN1-202ENST00000380707 TNFRSF8P28908 595 aa12.53□□□□□ -0.4
SMN1-202ENST00000380707 B4GALNT1Q00973 533 aa12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms