RNA–Protein interactions for RNA: ENST00000368533.7

TPM3-212, Transcript of tropomyosin 3, humanhuman

TSL 1 (best) BASIC

Gene TPM3, Length 3,131 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-212ENST00000368533 HTATIP2Q9BUP3 242 aa10.62□□□□□ -0.71
TPM3-212ENST00000368533 TDP1Q9NUW8 608 aa10.62□□□□□ -0.71
TPM3-212ENST00000368533 SEPT3Q9UH03 358 aa10.62□□□□□ -0.71
TPM3-212ENST00000368533 SLCO3A1Q9UIG8 710 aa10.62□□□□□ -0.71
TPM3-212ENST00000368533 RAI2Q9Y5P3 530 aa10.62□□□□□ -0.71
TPM3-212ENST00000368533 ILVBLA1L0T0 632 aa10.62□□□□□ -0.71
TPM3-212ENST00000368533 TMX2-CTNND1H3BSU7 103 aa10.62□□□□□ -0.71
TPM3-212ENST00000368533 TK2O00142 265 aa10.62□□□□□ -0.71
TPM3-212ENST00000368533 LINC01565O15544 149 aa10.62□□□□□ -0.71
TPM3-212ENST00000368533 CACNG3O60359 315 aa10.62□□□□□ -0.71
TPM3-212ENST00000368533 CHRNGP07510 517 aa10.62□□□□□ -0.71
TPM3-212ENST00000368533 MPSTP25325 297 aa10.62□□□□□ -0.71
TPM3-212ENST00000368533 EPHA3P29320 983 aa10.62□□□□□ -0.71
TPM3-212ENST00000368533 RPL5P46777 297 aaKnown RBP10.62□□□□□ -0.71
TPM3-212ENST00000368533 NAGLUP54802 743 aa10.62□□□□□ -0.71
TPM3-212ENST00000368533 TRAF2Q12933 501 aa10.62□□□□□ -0.71
TPM3-212ENST00000368533 INSCQ1MX18 579 aa10.62□□□□□ -0.71
TPM3-212ENST00000368533 RARS2Q5T160 578 aaKnown RBP10.62□□□□□ -0.71
TPM3-212ENST00000368533 TMEM214Q6NUQ4 689 aaKnown RBP10.62□□□□□ -0.71
TPM3-212ENST00000368533 Q6ZNB5 142 aa10.62□□□□□ -0.71
TPM3-212ENST00000368533 CACUL1Q86Y37 369 aa10.62□□□□□ -0.71
TPM3-212ENST00000368533 MFSD6LQ8IWD5 586 aa10.62□□□□□ -0.71
TPM3-212ENST00000368533 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP10.62□□□□□ -0.712e-8■■□□□ 11.4
TPM3-212ENST00000368533 SORCS3Q9UPU3 1222 aa10.62□□□□□ -0.71
TPM3-212ENST00000368533 RUVBL2Q9Y230 463 aaKnown RBP10.62□□□□□ -0.71
TPM3-212ENST00000368533 ANKRD36A6QL64 1941 aa10.61□□□□□ -0.71
TPM3-212ENST00000368533 F5P12259 2224 aa10.61□□□□□ -0.71
TPM3-212ENST00000368533 PEX1O43933 1283 aa10.61□□□□□ -0.71
TPM3-212ENST00000368533 MSX2P35548 267 aaPredicted RBP10.61□□□□□ -0.71
TPM3-212ENST00000368533 CREMQ03060 361 aa10.61□□□□□ -0.71
TPM3-212ENST00000368533 TNK2Q07912 1038 aa10.61□□□□□ -0.71
TPM3-212ENST00000368533 GRM2Q14416 872 aa10.61□□□□□ -0.71
TPM3-212ENST00000368533 COL13A1Q5TAT6 717 aaPredicted RBP10.61□□□□□ -0.71
TPM3-212ENST00000368533 FRMD7Q6ZUT3 714 aa10.61□□□□□ -0.71
TPM3-212ENST00000368533 AMIGO2Q86SJ2 522 aa10.61□□□□□ -0.71
TPM3-212ENST00000368533 TEX26Q8N6G2 289 aa10.61□□□□□ -0.71
TPM3-212ENST00000368533 OR13J1Q8NGT2 312 aa10.61□□□□□ -0.71
TPM3-212ENST00000368533 ELMO2Q96JJ3 720 aa10.61□□□□□ -0.71
TPM3-212ENST00000368533 MARK4Q96L34 752 aa10.61□□□□□ -0.71
TPM3-212ENST00000368533 KIFC1Q9BW19 673 aa10.61□□□□□ -0.71
TPM3-212ENST00000368533 GATA5Q9BWX5 397 aaPredicted RBP10.61□□□□□ -0.71
TPM3-212ENST00000368533 NUF2Q9BZD4 464 aa10.61□□□□□ -0.71
TPM3-212ENST00000368533 ILKAPQ9H0C8 392 aaPredicted RBP10.61□□□□□ -0.71
TPM3-212ENST00000368533 S100A14Q9HCY8 104 aa10.61□□□□□ -0.71
TPM3-212ENST00000368533 TCF7L2Q9NQB0 619 aa10.61□□□□□ -0.71
TPM3-212ENST00000368533 TSC22D4Q9Y3Q8 395 aa10.61□□□□□ -0.71
TPM3-212ENST00000368533 PALM2-AKAP2B1ALY0 433 aaPredicted RBP10.61□□□□□ -0.71
TPM3-212ENST00000368533 TIMM44O43615 452 aa10.61□□□□□ -0.71
TPM3-212ENST00000368533 ADAM23O75077 832 aa10.61□□□□□ -0.71
TPM3-212ENST00000368533 OLFM2O95897 454 aa10.61□□□□□ -0.71
TPM3-212ENST00000368533 COX4I1P13073 169 aa10.61□□□□□ -0.71
TPM3-212ENST00000368533 PORP16435 677 aaPredicted RBP10.61□□□□□ -0.71
TPM3-212ENST00000368533 NUDT2P50583 147 aa10.61□□□□□ -0.71
TPM3-212ENST00000368533 ZNF33AQ06730 810 aa10.61□□□□□ -0.71
TPM3-212ENST00000368533 TUBB3Q13509 450 aa10.61□□□□□ -0.71
TPM3-212ENST00000368533 CCDC117Q8IWD4 279 aaPredicted RBP10.61□□□□□ -0.71
TPM3-212ENST00000368533 BBS5Q8N3I7 341 aa10.61□□□□□ -0.71
TPM3-212ENST00000368533 RNF148Q8N7C7 305 aa10.61□□□□□ -0.71
TPM3-212ENST00000368533 VN1R2Q8NFZ6 395 aa10.61□□□□□ -0.71
TPM3-212ENST00000368533 GRIN3AQ8TCU5 1115 aa10.61□□□□□ -0.71
TPM3-212ENST00000368533 KCTD4Q8WVF5 259 aa10.61□□□□□ -0.71
TPM3-212ENST00000368533 OR52B2Q96RD2 323 aa10.61□□□□□ -0.71
TPM3-212ENST00000368533 OMDQ99983 421 aa10.61□□□□□ -0.71
TPM3-212ENST00000368533 ACE2Q9BYF1 805 aaPredicted RBP10.61□□□□□ -0.71
TPM3-212ENST00000368533 CDH19Q9H159 772 aa10.61□□□□□ -0.71
TPM3-212ENST00000368533 ARHGAP26Q9UNA1 814 aa10.61□□□□□ -0.71
TPM3-212ENST00000368533 SPEGQ15772 3267 aa10.61□□□□□ -0.71
TPM3-212ENST00000368533 MPOP05164 745 aa10.6□□□□□ -0.71
TPM3-212ENST00000368533 PPP3CCP48454 512 aa10.6□□□□□ -0.71
TPM3-212ENST00000368533 NEPROQ6NW34 567 aa10.6□□□□□ -0.71
TPM3-212ENST00000368533 SLC2A7Q6PXP3 512 aa10.6□□□□□ -0.71
TPM3-212ENST00000368533 PATL1Q86TB9 770 aaKnown RBP10.6□□□□□ -0.71
TPM3-212ENST00000368533 PIM3Q86V86 326 aa10.6□□□□□ -0.71
TPM3-212ENST00000368533 LRRC49Q8IUZ0 686 aa10.6□□□□□ -0.71
TPM3-212ENST00000368533 CEP97Q8IW35 865 aa10.6□□□□□ -0.71
TPM3-212ENST00000368533 SFTPA1Q8IWL2 248 aa10.6□□□□□ -0.71
TPM3-212ENST00000368533 MDGA1Q8NFP4 955 aa10.6□□□□□ -0.71
TPM3-212ENST00000368533 OR4K2Q8NGD2 314 aa10.6□□□□□ -0.71
TPM3-212ENST00000368533 MAPK15Q8TD08 544 aa10.6□□□□□ -0.71
TPM3-212ENST00000368533 RSPRY1Q96DX4 576 aa10.6□□□□□ -0.71
TPM3-212ENST00000368533 LENG8Q96PV6 779 aaPredicted RBP10.6□□□□□ -0.71
TPM3-212ENST00000368533 PSKH2Q96QS6 385 aa10.6□□□□□ -0.71
TPM3-212ENST00000368533 DCUN1D5Q9BTE7 237 aa10.6□□□□□ -0.71
TPM3-212ENST00000368533 CIPCQ9C0C6 399 aa10.6□□□□□ -0.71
TPM3-212ENST00000368533 FAIMQ9NVQ4 179 aa10.6□□□□□ -0.71
TPM3-212ENST00000368533 DNAJC28Q9NX36 388 aa10.6□□□□□ -0.71
TPM3-212ENST00000368533 UBA6A0AVT1 1052 aaPredicted RBP10.6□□□□□ -0.71
TPM3-212ENST00000368533 FBP2O00757 339 aa10.6□□□□□ -0.71
TPM3-212ENST00000368533 ATP5BP06576 529 aaKnown RBP10.6□□□□□ -0.71
TPM3-212ENST00000368533 TYRP14679 529 aa10.6□□□□□ -0.71
TPM3-212ENST00000368533 CPOXP36551 454 aa10.6□□□□□ -0.71
TPM3-212ENST00000368533 GRIA4P48058 902 aa10.6□□□□□ -0.71
TPM3-212ENST00000368533 SLC12A2P55011 1212 aa10.6□□□□□ -0.71
TPM3-212ENST00000368533 KLF10Q13118 480 aa10.6□□□□□ -0.71
TPM3-212ENST00000368533 CBLBQ13191 982 aa10.6□□□□□ -0.71
TPM3-212ENST00000368533 TSTD2Q5T7W7 516 aa10.6□□□□□ -0.71
TPM3-212ENST00000368533 CCDC80Q76M96 950 aa10.6□□□□□ -0.71
TPM3-212ENST00000368533 GLT6D1Q7Z4J2 308 aa10.6□□□□□ -0.71
TPM3-212ENST00000368533 SETD3Q86TU7 594 aaPredicted RBP10.6□□□□□ -0.71
TPM3-212ENST00000368533 PHOSPHO2Q8TCD6 241 aa10.6□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms