RNA–Protein interactions for RNA: ENST00000361439.8

NSMCE1-201, Transcript of NSE1 homolog, SMC5-SMC6 complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NSMCE1, Length 1,067 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE1-201ENST00000361439 PPARDQ03181 441 aa13.7□□□□□ -0.22
NSMCE1-201ENST00000361439 PDIA2Q13087 525 aaKnown RBP13.7□□□□□ -0.22
NSMCE1-201ENST00000361439 SLC14A1Q13336 389 aa13.7□□□□□ -0.22
NSMCE1-201ENST00000361439 HLA-BQ31612 363 aa13.7□□□□□ -0.22
NSMCE1-201ENST00000361439 FASTKD1Q53R41 847 aaKnown RBP13.7□□□□□ -0.22
NSMCE1-201ENST00000361439 SPANXN3Q5MJ09 141 aa13.7□□□□□ -0.22
NSMCE1-201ENST00000361439 ZNF449Q6P9G9 518 aa13.7□□□□□ -0.22
NSMCE1-201ENST00000361439 ENPP7Q6UWV6 458 aa13.7□□□□□ -0.22
NSMCE1-201ENST00000361439 ZDHHC24Q6UX98 284 aa13.7□□□□□ -0.22
NSMCE1-201ENST00000361439 PRR23CQ6ZRP0 262 aa13.7□□□□□ -0.22
NSMCE1-201ENST00000361439 CYS1Q717R9 158 aa13.7□□□□□ -0.22
NSMCE1-201ENST00000361439 RELL1Q8IUW5 271 aa13.7□□□□□ -0.22
NSMCE1-201ENST00000361439 AGGF1Q8N302 714 aaeCLIP13.7□□□□□ -0.22
NSMCE1-201ENST00000361439 NXPE1Q8N323 547 aa13.7□□□□□ -0.22
NSMCE1-201ENST00000361439 GPR150Q8NGU9 434 aa13.7□□□□□ -0.22
NSMCE1-201ENST00000361439 OR6P1Q8NGX9 317 aa13.7□□□□□ -0.22
NSMCE1-201ENST00000361439 CALML6Q8TD86 181 aa13.7□□□□□ -0.22
NSMCE1-201ENST00000361439 PHOX2BQ99453 314 aa13.7□□□□□ -0.22
NSMCE1-201ENST00000361439 DNAAF2Q9NVR5 837 aaKnown RBP13.7□□□□□ -0.22
NSMCE1-201ENST00000361439 SLC2A6Q9UGQ3 507 aa13.7□□□□□ -0.22
NSMCE1-201ENST00000361439 ZC3H7BQ9UGR2 993 aaKnown RBP13.7□□□□□ -0.22
NSMCE1-201ENST00000361439 CRLS1Q9UJA2 301 aa13.7□□□□□ -0.22
NSMCE1-201ENST00000361439 FNDC3AQ9Y2H6 1198 aaKnown RBP13.7□□□□□ -0.22
NSMCE1-201ENST00000361439 WDR87Q6ZQQ6 2873 aa13.7□□□□□ -0.22
NSMCE1-201ENST00000361439 FRYLO94915 3013 aa13.69□□□□□ -0.22
NSMCE1-201ENST00000361439 KNL1Q8NG31 2342 aa13.69□□□□□ -0.22
NSMCE1-201ENST00000361439 IGLV3-16A0A075B6K0 115 aa13.69□□□□□ -0.22
NSMCE1-201ENST00000361439 A0A1B0GTQ1 180 aa13.69□□□□□ -0.22
NSMCE1-201ENST00000361439 ESYT3A0FGR9 886 aa13.69□□□□□ -0.22
NSMCE1-201ENST00000361439 PRSS38A1L453 326 aa13.69□□□□□ -0.22
NSMCE1-201ENST00000361439 CCDC162PA2VCL2 907 aa13.69□□□□□ -0.22
NSMCE1-201ENST00000361439 KLHL33A6NCF5 533 aa13.69□□□□□ -0.22
NSMCE1-201ENST00000361439 TMEM202A6NGA9 273 aa13.69□□□□□ -0.22
NSMCE1-201ENST00000361439 CFAP99D6REC4 459 aa13.69□□□□□ -0.22
NSMCE1-201ENST00000361439 QSOX1O00391 747 aa13.69□□□□□ -0.22
NSMCE1-201ENST00000361439 INPP4BO15327 924 aa13.69□□□□□ -0.22
NSMCE1-201ENST00000361439 PCDHGA12O60330 932 aa13.69□□□□□ -0.22
NSMCE1-201ENST00000361439 UGT1A9O60656 530 aa13.69□□□□□ -0.22
NSMCE1-201ENST00000361439 RASGRP1O95267 797 aa13.69□□□□□ -0.22
NSMCE1-201ENST00000361439 VAPBO95292 243 aa13.69□□□□□ -0.22
NSMCE1-201ENST00000361439 GOT2P00505 430 aaKnown RBP13.69□□□□□ -0.22
NSMCE1-201ENST00000361439 CEACAM5P06731 702 aa13.69□□□□□ -0.22
NSMCE1-201ENST00000361439 GSTA2P09210 222 aa13.69□□□□□ -0.22
NSMCE1-201ENST00000361439 UGT1A6P19224 532 aa13.69□□□□□ -0.22
NSMCE1-201ENST00000361439 UGT1A1P22309 533 aa13.69□□□□□ -0.22
NSMCE1-201ENST00000361439 UGT1A4P22310 534 aa13.69□□□□□ -0.22
NSMCE1-201ENST00000361439 ACRV1P26436 265 aa13.69□□□□□ -0.22
NSMCE1-201ENST00000361439 FOXN2P32314 431 aa13.69□□□□□ -0.22
NSMCE1-201ENST00000361439 UGT1A3P35503 534 aa13.69□□□□□ -0.22
NSMCE1-201ENST00000361439 UGT1A5P35504 534 aa13.69□□□□□ -0.22
NSMCE1-201ENST00000361439 ELK3P41970 407 aa13.69□□□□□ -0.22
NSMCE1-201ENST00000361439 ARCN1P48444 511 aaKnown RBP13.69□□□□□ -0.22
NSMCE1-201ENST00000361439 TTPAP49638 278 aa13.69□□□□□ -0.22
NSMCE1-201ENST00000361439 HK3P52790 923 aa13.69□□□□□ -0.22
NSMCE1-201ENST00000361439 EIF2B5Q13144 721 aaKnown RBP13.69□□□□□ -0.22
NSMCE1-201ENST00000361439 LRP8Q14114 963 aa13.69□□□□□ -0.22
NSMCE1-201ENST00000361439 ITIH4Q14624 930 aa13.69□□□□□ -0.22
NSMCE1-201ENST00000361439 CRYMQ14894 314 aa13.69□□□□□ -0.22
NSMCE1-201ENST00000361439 TRADDQ15628 312 aa13.69□□□□□ -0.22
NSMCE1-201ENST00000361439 LONRF1Q17RB8 773 aa13.69□□□□□ -0.22
NSMCE1-201ENST00000361439 ZRANB3Q5FWF4 1079 aa13.69□□□□□ -0.22
NSMCE1-201ENST00000361439 GPRC6AQ5T6X5 926 aa13.69□□□□□ -0.22
NSMCE1-201ENST00000361439 STEAP4Q687X5 459 aa13.69□□□□□ -0.22
NSMCE1-201ENST00000361439 MRNIPQ6NTE8 343 aa13.69□□□□□ -0.22
NSMCE1-201ENST00000361439 LAYNQ6UX15 382 aa13.69□□□□□ -0.22
NSMCE1-201ENST00000361439 PACS1Q6VY07 963 aa13.69□□□□□ -0.22
NSMCE1-201ENST00000361439 SDCCAG8Q86SQ7 713 aaPredicted RBP13.69□□□□□ -0.22
NSMCE1-201ENST00000361439 ZBED8Q8IZ13 594 aa13.69□□□□□ -0.22
NSMCE1-201ENST00000361439 SERBP1Q8NC51 408 aaKnown RBP eCLIP13.69□□□□□ -0.22
NSMCE1-201ENST00000361439 GDAP1Q8TB36 358 aa13.69□□□□□ -0.22
NSMCE1-201ENST00000361439 PYROXD1Q8WU10 500 aa13.69□□□□□ -0.22
NSMCE1-201ENST00000361439 TTC25Q96NG3 672 aa13.69□□□□□ -0.22
NSMCE1-201ENST00000361439 TCF12Q99081 682 aa13.69□□□□□ -0.22
NSMCE1-201ENST00000361439 COPS8Q99627 209 aa13.69□□□□□ -0.22
NSMCE1-201ENST00000361439 SLC13A1Q9BZW2 595 aa13.69□□□□□ -0.22
NSMCE1-201ENST00000361439 GAREM1Q9H706 876 aa13.69□□□□□ -0.22
NSMCE1-201ENST00000361439 SUDS3Q9H7L9 328 aaPredicted RBP13.69□□□□□ -0.22
NSMCE1-201ENST00000361439 UGT1A7Q9HAW7 530 aa13.69□□□□□ -0.22
NSMCE1-201ENST00000361439 UGT1A10Q9HAW8 530 aa13.69□□□□□ -0.22
NSMCE1-201ENST00000361439 UGT1A8Q9HAW9 530 aa13.69□□□□□ -0.22
NSMCE1-201ENST00000361439 TRNAU1APQ9NX07 287 aaKnown RBP13.69□□□□□ -0.22
NSMCE1-201ENST00000361439 ZDHHC3Q9NYG2 299 aa13.69□□□□□ -0.22
NSMCE1-201ENST00000361439 TMPRSS11EQ9UL52 423 aa13.69□□□□□ -0.22
NSMCE1-201ENST00000361439 GPR34Q9UPC5 381 aa13.69□□□□□ -0.22
NSMCE1-201ENST00000361439 VPS9D1Q9Y2B5 631 aa13.69□□□□□ -0.22
NSMCE1-201ENST00000361439 PCDHGB2Q9Y5G2 931 aa13.69□□□□□ -0.22
NSMCE1-201ENST00000361439 ZNF106Q9H2Y7 1883 aaKnown RBP13.69□□□□□ -0.22
NSMCE1-201ENST00000361439 PCDH15Q96QU1 1955 aa13.69□□□□□ -0.22
NSMCE1-201ENST00000361439 ZNF292O60281 2723 aa13.69□□□□□ -0.22
NSMCE1-201ENST00000361439 FAM186AA6NE01 2351 aa13.68□□□□□ -0.22
NSMCE1-201ENST00000361439 GVINP1Q7Z2Y8 2422 aa13.68□□□□□ -0.22
NSMCE1-201ENST00000361439 F8W8V4 182 aa13.68□□□□□ -0.22
NSMCE1-201ENST00000361439 CHUKO15111 745 aa13.68□□□□□ -0.22
NSMCE1-201ENST00000361439 CD3EAPO15446 510 aaKnown RBP13.68□□□□□ -0.22
NSMCE1-201ENST00000361439 NUAK1O60285 661 aa13.68□□□□□ -0.22
NSMCE1-201ENST00000361439 GFRA3O60609 400 aa13.68□□□□□ -0.22
NSMCE1-201ENST00000361439 KCNJ13O60928 360 aa13.68□□□□□ -0.22
NSMCE1-201ENST00000361439 DNAJC6O75061 913 aa13.68□□□□□ -0.22
NSMCE1-201ENST00000361439 SPAG6O75602 509 aa13.68□□□□□ -0.22
NSMCE1-201ENST00000361439 CDK14O94921 469 aa13.68□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms