RNA–Protein interactions for RNA: ENST00000360046.9

HOXA4-201, Transcript of homeobox A4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXA4, Length 1,747 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA4-201ENST00000360046 SNX15Q9NRS6 342 aa21.71■■□□□ 1.07
HOXA4-201ENST00000360046 ACTL7BQ9Y614 415 aa21.71■■□□□ 1.07
HOXA4-201ENST00000360046 AGAP14A8MT82 685 aa21.7■■□□□ 1.06
HOXA4-201ENST00000360046 RNGTTO60942 597 aaKnown RBP21.7■■□□□ 1.06
HOXA4-201ENST00000360046 NR1D1P20393 614 aa21.7■■□□□ 1.06
HOXA4-201ENST00000360046 CREB5Q02930 508 aa21.7■■□□□ 1.06
HOXA4-201ENST00000360046 ILF2Q12905 390 aaKnown RBP21.7■■□□□ 1.06
HOXA4-201ENST00000360046 TMEM31Q5JXX7 168 aa21.7■■□□□ 1.06
HOXA4-201ENST00000360046 KIAA1161Q6NSJ0 714 aa21.7■■□□□ 1.06
HOXA4-201ENST00000360046 TIFABQ6ZNK6 161 aa21.7■■□□□ 1.06
HOXA4-201ENST00000360046 ZNF765Q7L2R6 523 aa21.7■■□□□ 1.06
HOXA4-201ENST00000360046 DTX3LQ8TDB6 740 aa21.7■■□□□ 1.06
HOXA4-201ENST00000360046 SELENOSQ9BQE4 189 aa21.7■■□□□ 1.06
HOXA4-201ENST00000360046 PCMTD2Q9NV79 361 aa21.7■■□□□ 1.06
HOXA4-201ENST00000360046 OGFRQ9NZT2 677 aa21.7■■□□□ 1.06
HOXA4-201ENST00000360046 CORO1CQ9ULV4 474 aaPredicted RBP21.7■■□□□ 1.06
HOXA4-201ENST00000360046 ZFR2Q9UPR6 939 aaKnown RBP21.7■■□□□ 1.06
HOXA4-201ENST00000360046 A0A1W2PQU0 124 aa21.69■■□□□ 1.06
HOXA4-201ENST00000360046 TMEM221A6NGB7 291 aa21.69■■□□□ 1.06
HOXA4-201ENST00000360046 FADS2P1A8MWK0 482 aa21.69■■□□□ 1.06
HOXA4-201ENST00000360046 M0R296 226 aa21.69■■□□□ 1.06
HOXA4-201ENST00000360046 SPAG7O75391 227 aa21.69■■□□□ 1.06
HOXA4-201ENST00000360046 ZNF7P17097 686 aaPredicted RBP21.69■■□□□ 1.06
HOXA4-201ENST00000360046 CXCL12P48061 93 aa21.69■■□□□ 1.06
HOXA4-201ENST00000360046 PPARDQ03181 441 aa21.69■■□□□ 1.06
HOXA4-201ENST00000360046 HECTD2Q5U5R9 776 aa21.69■■□□□ 1.06
HOXA4-201ENST00000360046 RAET1GQ6H3X3 334 aa21.69■■□□□ 1.06
HOXA4-201ENST00000360046 RBFAQ8N0V3 343 aa21.69■■□□□ 1.06
HOXA4-201ENST00000360046 KLK6Q92876 244 aa21.69■■□□□ 1.06
HOXA4-201ENST00000360046 COPS8Q99627 209 aa21.69■■□□□ 1.06
HOXA4-201ENST00000360046 BOCQ9BWV1 1114 aa21.69■■□□□ 1.06
HOXA4-201ENST00000360046 BTBD1Q9H0C5 482 aa21.69■■□□□ 1.06
HOXA4-201ENST00000360046 KCNK9Q9NPC2 374 aa21.69■■□□□ 1.06
HOXA4-201ENST00000360046 ITM2CQ9NQX7 267 aa21.69■■□□□ 1.06
HOXA4-201ENST00000360046 SMOXQ9NWM0 555 aa21.69■■□□□ 1.06
HOXA4-201ENST00000360046 EBF1Q9UH73 591 aa21.69■■□□□ 1.06
HOXA4-201ENST00000360046 ACSL1P33121 698 aa21.69■■□□□ 1.06
HOXA4-201ENST00000360046 PXNP49023 591 aaPredicted RBP21.69■■□□□ 1.06
HOXA4-201ENST00000360046 POU4F1Q01851 419 aa21.69■■□□□ 1.06
HOXA4-201ENST00000360046 SGCGQ13326 291 aa21.69■■□□□ 1.06
HOXA4-201ENST00000360046 FAM45BPQ6NSW5 357 aa21.69■■□□□ 1.06
HOXA4-201ENST00000360046 ZNF549Q6P9A3 640 aa21.69■■□□□ 1.06
HOXA4-201ENST00000360046 RAPH1Q70E73 1250 aa21.69■■□□□ 1.06
HOXA4-201ENST00000360046 FAM76AQ8TAV0 307 aa21.69■■□□□ 1.06
HOXA4-201ENST00000360046 FAM45AQ8TCE6 357 aa21.69■■□□□ 1.06
HOXA4-201ENST00000360046 CCDC97Q96F63 343 aaPredicted RBP21.69■■□□□ 1.06
HOXA4-201ENST00000360046 TPSD1Q9BZJ3 242 aa21.69■■□□□ 1.06
HOXA4-201ENST00000360046 CLPBQ9H078 707 aa21.69■■□□□ 1.06
HOXA4-201ENST00000360046 ZDHHC3Q9NYG2 299 aa21.69■■□□□ 1.06
HOXA4-201ENST00000360046 USP36Q9P275 1121 aaKnown RBP21.69■■□□□ 1.06
HOXA4-201ENST00000360046 TMPRSS11EQ9UL52 423 aa21.69■■□□□ 1.06
HOXA4-201ENST00000360046 DOCK9Q9BZ29 2069 aa21.68■■□□□ 1.06
HOXA4-201ENST00000360046 K7ESM1 405 aa21.68■■□□□ 1.06
HOXA4-201ENST00000360046 PRMT5O14744 637 aaPredicted RBP21.68■■□□□ 1.06
HOXA4-201ENST00000360046 APBB3O95704 486 aa21.68■■□□□ 1.06
HOXA4-201ENST00000360046 STMN1P16949 149 aa21.68■■□□□ 1.06
HOXA4-201ENST00000360046 AKT1P31749 480 aa21.68■■□□□ 1.06
HOXA4-201ENST00000360046 GPR1P46091 355 aa21.68■■□□□ 1.06
HOXA4-201ENST00000360046 POLD2P49005 469 aa21.68■■□□□ 1.06
HOXA4-201ENST00000360046 TAS2R39P59534 338 aa21.68■■□□□ 1.06
HOXA4-201ENST00000360046 PPP2R2AP63151 447 aa21.68■■□□□ 1.06
HOXA4-201ENST00000360046 DPTQ07507 201 aa21.68■■□□□ 1.06
HOXA4-201ENST00000360046 GPRC6AQ5T6X5 926 aa21.68■■□□□ 1.06
HOXA4-201ENST00000360046 HORMAD1Q86X24 394 aa21.68■■□□□ 1.06
HOXA4-201ENST00000360046 PELI3Q8N2H9 469 aa21.68■■□□□ 1.06
HOXA4-201ENST00000360046 ISL2Q96A47 359 aa21.68■■□□□ 1.06
HOXA4-201ENST00000360046 VPS11Q9H270 941 aa21.68■■□□□ 1.06
HOXA4-201ENST00000360046 KDM4CQ9H3R0 1056 aa21.68■■□□□ 1.06
HOXA4-201ENST00000360046 KCTD5Q9NXV2 234 aa21.68■■□□□ 1.06
HOXA4-201ENST00000360046 CYP8B1Q9UNU6 501 aa21.68■■□□□ 1.06
HOXA4-201ENST00000360046 VWA7Q9Y334 891 aa21.68■■□□□ 1.06
HOXA4-201ENST00000360046 LRRC72A6NJI9 287 aa21.67■■□□□ 1.06
HOXA4-201ENST00000360046 POLR3GO15318 223 aaPredicted RBP21.67■■□□□ 1.06
HOXA4-201ENST00000360046 INPP4BO15327 924 aa21.67■■□□□ 1.06
HOXA4-201ENST00000360046 PHGDHO43175 533 aaKnown RBP21.67■■□□□ 1.06
HOXA4-201ENST00000360046 AOC1P19801 751 aa21.67■■□□□ 1.06
HOXA4-201ENST00000360046 MAT2AP31153 395 aaKnown RBP21.67■■□□□ 1.06
HOXA4-201ENST00000360046 MAGEA9P43362 315 aa21.67■■□□□ 1.06
HOXA4-201ENST00000360046 PGGT1BP53609 377 aa21.67■■□□□ 1.06
HOXA4-201ENST00000360046 RAB10P61026 200 aa21.67■■□□□ 1.06
HOXA4-201ENST00000360046 ITIH4Q14624 930 aa21.67■■□□□ 1.06
HOXA4-201ENST00000360046 TMEM259Q4ZIN3 620 aa21.67■■□□□ 1.06
HOXA4-201ENST00000360046 NEK5Q6P3R8 708 aa21.67■■□□□ 1.06
HOXA4-201ENST00000360046 GLYATL1Q969I3 302 aa21.67■■□□□ 1.06
HOXA4-201ENST00000360046 TSPAN17Q96FV3 270 aa21.67■■□□□ 1.06
HOXA4-201ENST00000360046 BIRC8Q96P09 236 aa21.67■■□□□ 1.06
HOXA4-201ENST00000360046 VPS35Q96QK1 796 aa21.67■■□□□ 1.06
HOXA4-201ENST00000360046 OLFM1Q99784 485 aa21.67■■□□□ 1.06
HOXA4-201ENST00000360046 AARSD1Q9BTE6 412 aaKnown RBP21.67■■□□□ 1.06
HOXA4-201ENST00000360046 SLC13A1Q9BZW2 595 aa21.67■■□□□ 1.06
HOXA4-201ENST00000360046 SGK2Q9HBY8 427 aa21.67■■□□□ 1.06
HOXA4-201ENST00000360046 SPATA6Q9NWH7 488 aaPredicted RBP21.67■■□□□ 1.06
HOXA4-201ENST00000360046 PAK4O96013 591 aaPredicted RBP21.66■■□□□ 1.06
HOXA4-201ENST00000360046 ESR1P03372 595 aa21.66■■□□□ 1.06
HOXA4-201ENST00000360046 PCCBP05166 539 aa21.66■■□□□ 1.06
HOXA4-201ENST00000360046 PKMP14618 531 aaKnown RBP21.66■■□□□ 1.06
HOXA4-201ENST00000360046 CDKN2DP55273 166 aa21.66■■□□□ 1.06
HOXA4-201ENST00000360046 PPP2CBP62714 309 aa21.66■■□□□ 1.06
HOXA4-201ENST00000360046 PPP2CAP67775 309 aa21.66■■□□□ 1.06
HOXA4-201ENST00000360046 PDE1CQ14123 709 aaPredicted RBP21.66■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms