RNA–Protein interactions for RNA: ENST00000358901.10

VCP-201, Transcript of valosin containing protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VCP, Length 4,370 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-201ENST00000358901 NCBP2-AS2Q69YL0 99 aa13.64□□□□□ -0.23
VCP-201ENST00000358901 TRIM40Q6P9F5 258 aa13.64□□□□□ -0.23
VCP-201ENST00000358901 FRMD7Q6ZUT3 714 aa13.64□□□□□ -0.23
VCP-201ENST00000358901 CPNE9Q8IYJ1 553 aa13.64□□□□□ -0.23
VCP-201ENST00000358901 GALNT15Q8N3T1 639 aa13.64□□□□□ -0.23
VCP-201ENST00000358901 MAB21L3Q8N8X9 362 aa13.64□□□□□ -0.23
VCP-201ENST00000358901 SCAMP5Q8TAC9 235 aa13.64□□□□□ -0.23
VCP-201ENST00000358901 MYO19Q96H55 970 aa13.64□□□□□ -0.23
VCP-201ENST00000358901 CORO1BQ9BR76 489 aa13.64□□□□□ -0.23
VCP-201ENST00000358901 CRISPLD1Q9H336 500 aa13.64□□□□□ -0.23
VCP-201ENST00000358901 TMEM39AQ9NV64 488 aa13.64□□□□□ -0.23
VCP-201ENST00000358901 CRNNQ9UBG3 495 aaPredicted RBP13.64□□□□□ -0.23
VCP-201ENST00000358901 SAMD4AQ9UPU9 718 aaKnown RBP13.64□□□□□ -0.23
VCP-201ENST00000358901 STX16-NPEPL1H3BU86 382 aa13.64□□□□□ -0.23
VCP-201ENST00000358901 ERAL1O75616 437 aaKnown RBP13.64□□□□□ -0.23
VCP-201ENST00000358901 TACR2P21452 398 aa13.64□□□□□ -0.23
VCP-201ENST00000358901 CXCR3P49682 368 aa13.64□□□□□ -0.23
VCP-201ENST00000358901 ZNF846Q147U1 533 aa13.64□□□□□ -0.23
VCP-201ENST00000358901 TCEA2Q15560 299 aa13.64□□□□□ -0.23
VCP-201ENST00000358901 KIAA0930Q6ICG6 404 aaPredicted RBP13.64□□□□□ -0.23
VCP-201ENST00000358901 CLP1Q92989 425 aaKnown RBP13.64□□□□□ -0.23
VCP-201ENST00000358901 USP7Q93009 1102 aa13.64□□□□□ -0.23
VCP-201ENST00000358901 MRPL48Q96GC5 212 aaKnown RBP13.64□□□□□ -0.23
VCP-201ENST00000358901 ZNF558Q96NG5 402 aa13.64□□□□□ -0.23
VCP-201ENST00000358901 ZNF570Q96NI8 536 aa13.64□□□□□ -0.23
VCP-201ENST00000358901 NFKBIZQ9BYH8 718 aa13.64□□□□□ -0.23
VCP-201ENST00000358901 NMUR1Q9HB89 426 aa13.64□□□□□ -0.23
VCP-201ENST00000358901 EIF2B4Q9UI10 523 aaKnown RBP13.64□□□□□ -0.23
VCP-201ENST00000358901 PSME2Q9UL46 239 aa13.64□□□□□ -0.23
VCP-201ENST00000358901 SPEF2Q9C093 1822 aa13.64□□□□□ -0.23
VCP-201ENST00000358901 TBC1D3BA6NDS4 549 aa13.64□□□□□ -0.23
VCP-201ENST00000358901 NTSP30990 170 aa13.64□□□□□ -0.23
VCP-201ENST00000358901 GPR1P46091 355 aa13.64□□□□□ -0.23
VCP-201ENST00000358901 GNA12Q03113 381 aa13.64□□□□□ -0.23
VCP-201ENST00000358901 SLC18A2Q05940 514 aa13.64□□□□□ -0.23
VCP-201ENST00000358901 RAET1GQ6H3X3 334 aa13.64□□□□□ -0.23
VCP-201ENST00000358901 ATG14Q6ZNE5 492 aa13.64□□□□□ -0.23
VCP-201ENST00000358901 DSG4Q86SJ6 1040 aa13.64□□□□□ -0.23
VCP-201ENST00000358901 PHTF2Q8N3S3 785 aa13.64□□□□□ -0.23
VCP-201ENST00000358901 C7orf43Q8WVR3 580 aa13.64□□□□□ -0.23
VCP-201ENST00000358901 SUSD6Q92537 303 aa13.64□□□□□ -0.23
VCP-201ENST00000358901 TPK1Q9H3S4 243 aa13.64□□□□□ -0.23
VCP-201ENST00000358901 C8orf4Q9NR00 106 aa13.64□□□□□ -0.23
VCP-201ENST00000358901 EVLQ9UI08 416 aaPredicted RBP13.64□□□□□ -0.23
VCP-201ENST00000358901 BTBD19C9JJ37 291 aa13.64□□□□□ -0.23
VCP-201ENST00000358901 PPEF2O14830 753 aa13.64□□□□□ -0.23
VCP-201ENST00000358901 FADS2O95864 444 aaKnown RBP13.64□□□□□ -0.23
VCP-201ENST00000358901 SMPD1P17405 629 aa13.64□□□□□ -0.23
VCP-201ENST00000358901 CYP3A5P20815 502 aa13.64□□□□□ -0.23
VCP-201ENST00000358901 IKBKEQ14164 716 aa13.64□□□□□ -0.23
VCP-201ENST00000358901 LYPLAL1Q5VWZ2 237 aa13.64□□□□□ -0.23
VCP-201ENST00000358901 C11orf88Q6PI97 169 aa13.64□□□□□ -0.23
VCP-201ENST00000358901 ARL10Q8N8L6 244 aa13.64□□□□□ -0.23
VCP-201ENST00000358901 FTHL17Q9BXU8 183 aa13.64□□□□□ -0.23
VCP-201ENST00000358901 ATG10Q9H0Y0 220 aa13.64□□□□□ -0.23
VCP-201ENST00000358901 OXSMQ9NWU1 459 aa13.64□□□□□ -0.23
VCP-201ENST00000358901 VPS4AQ9UN37 437 aa13.64□□□□□ -0.23
VCP-201ENST00000358901 PCDHB1Q9Y5F3 818 aa13.64□□□□□ -0.23
VCP-201ENST00000358901 TRAV19A0A0A6YYK7 116 aa13.63□□□□□ -0.23
VCP-201ENST00000358901 H0YC42 278 aa13.63□□□□□ -0.23
VCP-201ENST00000358901 PDE9AO76083 593 aa13.63□□□□□ -0.23
VCP-201ENST00000358901 ANGPTL1O95841 491 aa13.63□□□□□ -0.23
VCP-201ENST00000358901 EIF2S1P05198 315 aaKnown RBP13.63□□□□□ -0.23
VCP-201ENST00000358901 IGFBP5P24593 272 aa13.63□□□□□ -0.23
VCP-201ENST00000358901 CCNFP41002 786 aa13.63□□□□□ -0.23
VCP-201ENST00000358901 FAM110CQ1W6H9 321 aa13.63□□□□□ -0.23
VCP-201ENST00000358901 CERS6Q6ZMG9 384 aa13.63□□□□□ -0.23
VCP-201ENST00000358901 ROPN1LQ96C74 230 aa13.63□□□□□ -0.23
VCP-201ENST00000358901 TTPALQ9BTX7 342 aa13.63□□□□□ -0.23
VCP-201ENST00000358901 RHBGQ9H310 441 aa13.63□□□□□ -0.23
VCP-201ENST00000358901 KLF11O14901 512 aa13.63□□□□□ -0.23
VCP-201ENST00000358901 SNPHO15079 494 aa13.63□□□□□ -0.23
VCP-201ENST00000358901 STX11O75558 287 aa13.63□□□□□ -0.23
VCP-201ENST00000358901 TRBC1P01850 177 aa13.63□□□□□ -0.23
VCP-201ENST00000358901 UROSP10746 265 aa13.63□□□□□ -0.23
VCP-201ENST00000358901 PRKAR2AP13861 404 aaKnown RBP13.63□□□□□ -0.23
VCP-201ENST00000358901 IL12AP29459 219 aa13.63□□□□□ -0.23
VCP-201ENST00000358901 CORO1AP31146 461 aaKnown RBP13.63□□□□□ -0.23
VCP-201ENST00000358901 SRP54P61011 504 aaKnown RBP13.63□□□□□ -0.23
VCP-201ENST00000358901 ZSWIM7Q19AV6 140 aa13.63□□□□□ -0.23
VCP-201ENST00000358901 CNPY1Q3B7I2 92 aa13.63□□□□□ -0.23
VCP-201ENST00000358901 EGFLAMQ63HQ2 1017 aa13.63□□□□□ -0.23
VCP-201ENST00000358901 ANKRD46Q86W74 232 aa13.63□□□□□ -0.23
VCP-201ENST00000358901 IGDCC3Q8IVU1 814 aa13.63□□□□□ -0.23
VCP-201ENST00000358901 OR10A6Q8NH74 314 aa13.63□□□□□ -0.23
VCP-201ENST00000358901 EZH1Q92800 747 aaPredicted RBP13.63□□□□□ -0.23
VCP-201ENST00000358901 B3GALT6Q96L58 329 aa13.63□□□□□ -0.23
VCP-201ENST00000358901 AARSD1Q9BTE6 412 aaKnown RBP13.63□□□□□ -0.23
VCP-201ENST00000358901 CHID1Q9BWS9 393 aa13.63□□□□□ -0.23
VCP-201ENST00000358901 PTTG2Q9NZH5 202 aa13.63□□□□□ -0.23
VCP-201ENST00000358901 DNAJB4Q9UDY4 337 aa13.63□□□□□ -0.23
VCP-201ENST00000358901 SH3GLB1Q9Y371 365 aa13.63□□□□□ -0.23
VCP-201ENST00000358901 SLIT2O94813 1529 aa13.63□□□□□ -0.23
VCP-201ENST00000358901 PTPRJQ12913 1337 aa13.63□□□□□ -0.23
VCP-201ENST00000358901 OR51F1A6NGY5 319 aa13.63□□□□□ -0.23
VCP-201ENST00000358901 GUCY1B2O75343 617 aa13.63□□□□□ -0.23
VCP-201ENST00000358901 IL6P05231 212 aa13.63□□□□□ -0.23
VCP-201ENST00000358901 COL6A1P12109 1028 aa13.63□□□□□ -0.23
VCP-201ENST00000358901 ITGAXP20702 1163 aa13.63□□□□□ -0.23
VCP-201ENST00000358901 C4BPBP20851 252 aa13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms